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Angiopredict Whole genome Shallow Sequencing

Shallow sequencing of metastatic colorectal cancer samples for the Angiopredict and Nobev cohorts described in: van Dijk et al., JCO, in revision

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Data originating from patient samples

The Amsterdam UMC, tumor genome analysis core, allows access to published datasets upon written application and signature of a Data Access Agreement (DAA). In addition, applications to clinical datasets require approval by a Data Access Committee (DAC), who assess whether the proposed work is allowed given patient consent, as well as the scientific purpose. To aid this process we ask you to provide the information below. Requests will be prioritised according to novelty of the research question. Applications with insufficient detail on objectives, justification, and methods/planned analyses are unlikely to be accepted. 1.Reference number for the dataset 2.Full legal name and address of university/institution 3.Name(s) of the Principle Investigator who will use the data: 4.Name(s) and job title(s) of any other investigators who will use the data: 5.Please provide a minimum of one reference to a publication that can be found on PubMed and where the Principle Investigator is an author: 6.How will the data be stored and where will it be stored? 7.What is the proposed study title and what are the objectives and outcomes of the study in which the data will be used 8.Please provide a brief justification or rationale for the proposed study (max 250 words) 9.Please provide a brief description of planned data analyses (max 250 words): 10.Will the results arising from use of the data be used for the creation of products for sale or for any commercial purpose?

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002724 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00001882811 bam 245.2 MB
EGAF00001882842 bam 493.1 MB
EGAF00001882843 bam 708.2 MB
EGAF00001882844 bam 606.0 MB
EGAF00001882845 bam 405.9 MB
EGAF00001882846 bam 558.7 MB
EGAF00001882847 bam 520.5 MB
EGAF00001882848 bam 623.6 MB
EGAF00001882849 bam 795.3 MB
EGAF00001882850 bam 447.0 MB
EGAF00001882851 bam 868.8 MB
EGAF00001882852 bam 635.9 MB
EGAF00001882853 bam 192.8 MB
EGAF00001882854 bam 154.7 MB
EGAF00001882855 bam 147.1 MB
EGAF00001882856 bam 285.0 MB
EGAF00001882857 bam 225.7 MB
EGAF00001882858 bam 745.8 MB
EGAF00001882859 bam 213.0 MB
EGAF00001882860 bam 370.8 MB
EGAF00001882861 bam 978.7 MB
EGAF00001882862 bam 151.5 MB
EGAF00001882863 bam 426.0 MB
EGAF00001882864 bam 166.9 MB
EGAF00001882865 bam 289.7 MB
EGAF00001882866 bam 182.0 MB
EGAF00001882867 bam 1.2 GB
EGAF00001882868 bam 794.8 MB
EGAF00001882869 bam 1.0 GB
EGAF00001882870 bam 1.1 GB
EGAF00001882871 bam 770.1 MB
EGAF00001882872 bam 269.3 MB
EGAF00001882873 bam 241.2 MB
EGAF00001882874 bam 475.7 MB
EGAF00001882875 bam 526.4 MB
EGAF00001882876 bam 312.4 MB
EGAF00001882877 bam 414.7 MB
EGAF00001882878 bam 160.1 MB
EGAF00001882879 bam 631.1 MB
EGAF00001882880 bam 475.5 MB
EGAF00001882881 bam 926.4 MB
EGAF00001882882 bam 240.9 MB
EGAF00001882883 bam 284.9 MB
EGAF00001882884 bam 1.5 GB
EGAF00001882885 bam 297.9 MB
EGAF00001882886 bam 605.4 MB
EGAF00001882887 bam 654.8 MB
EGAF00001882888 bam 468.4 MB
EGAF00001882889 bam 1.9 GB
EGAF00001882890 bam 580.2 MB
EGAF00001882891 bam 663.8 MB
EGAF00001882892 bam 451.1 MB
EGAF00001882893 bam 574.0 MB
EGAF00001882894 bam 218.8 MB
EGAF00001882895 bam 650.0 MB
EGAF00001882896 bam 470.2 MB
EGAF00001882897 bam 956.6 MB
EGAF00001882898 bam 277.3 MB
EGAF00001882899 bam 413.8 MB
EGAF00001882900 bam 238.8 MB
EGAF00001882901 bam 431.9 MB
EGAF00001882902 bam 443.2 MB
EGAF00001882903 bam 448.9 MB
EGAF00001882904 bam 1.1 GB
EGAF00001882905 bam 349.9 MB
EGAF00001882906 bam 719.4 MB
EGAF00001882907 bam 509.8 MB
EGAF00001882908 bam 713.0 MB
EGAF00001882909 bam 1.2 GB
EGAF00001882910 bam 674.1 MB
EGAF00001882911 bam 682.6 MB
EGAF00001882912 bam 269.1 MB
EGAF00001882913 bam 322.5 MB
EGAF00001882914 bam 742.2 MB
EGAF00001882915 bam 718.2 MB
EGAF00001882916 bam 317.2 MB
EGAF00001882917 bam 458.7 MB
EGAF00001882918 bam 780.2 MB
EGAF00001882919 bam 579.4 MB
EGAF00001882920 bam 360.8 MB
EGAF00001882921 bam 984.6 MB
EGAF00001882922 bam 218.3 MB
EGAF00001882923 bam 358.0 MB
EGAF00001882924 bam 882.4 MB
EGAF00001882925 bam 365.0 MB
EGAF00001882926 bam 455.0 MB
EGAF00001882927 bam 560.9 MB
EGAF00001882928 bam 662.5 MB
EGAF00001882929 bam 378.5 MB
EGAF00001882930 bam 1.2 MB
EGAF00001882931 bam 180.7 MB
EGAF00001882932 bam 254.4 MB
EGAF00001882933 bam 1.6 GB
EGAF00001882934 bam 585.3 MB
EGAF00001882935 bam 464.2 MB
EGAF00001882936 bam 577.9 MB
EGAF00001882937 bam 49.1 MB
EGAF00001882938 bam 522.7 MB
EGAF00001882939 bam 265.9 MB
EGAF00001882940 bam 562.3 MB
EGAF00001882941 bam 501.5 MB
EGAF00001882942 bam 657.1 MB
EGAF00001882943 bam 128.5 MB
EGAF00001882944 bam 526.5 MB
EGAF00001882945 bam 363.6 MB
EGAF00001882946 bam 645.1 MB
EGAF00001882947 bam 352.6 MB
EGAF00001882948 bam 1.2 MB
EGAF00001882949 bam 382.7 MB
EGAF00001882950 bam 1.1 GB
EGAF00001882951 bam 347.9 MB
EGAF00001882952 bam 849.6 MB
EGAF00001882953 bam 660.4 MB
EGAF00001882954 bam 543.7 MB
EGAF00001882955 bam 984.4 MB
EGAF00001882956 bam 584.0 MB
EGAF00001882957 bam 564.6 MB
EGAF00001882958 bam 738.5 MB
EGAF00001882959 bam 458.5 MB
EGAF00001882960 bam 274.3 MB
EGAF00001882961 bam 15.8 MB
EGAF00001882962 bam 568.8 MB
EGAF00001882963 bam 437.4 MB
EGAF00001882964 bam 2.2 MB
EGAF00001882965 bam 836.4 MB
EGAF00001882966 bam 226.5 MB
EGAF00001882967 bam 472.5 MB
EGAF00001882968 bam 617.3 MB
EGAF00001882969 bam 218.7 MB
EGAF00001882970 bam 193.3 MB
EGAF00001882971 bam 737.4 MB
EGAF00001882972 bam 197.4 MB
EGAF00001882973 bam 490.7 MB
EGAF00001882974 bam 988.9 MB
EGAF00001882975 bam 599.2 MB
EGAF00001882976 bam 179.1 MB
EGAF00001882977 bam 593.7 MB
EGAF00001882978 bam 754.5 MB
EGAF00001882979 bam 284.6 MB
EGAF00001882980 bam 578.5 MB
EGAF00001882981 bam 283.9 MB
EGAF00001882982 bam 510.1 MB
EGAF00001882983 bam 153.5 MB
EGAF00001882984 bam 205.8 MB
EGAF00001882985 bam 663.2 MB
EGAF00001882986 bam 527.4 MB
EGAF00001882987 bam 721.7 MB
EGAF00001882988 bam 588.4 MB
EGAF00001882989 bam 619.8 MB
EGAF00001882990 bam 546.3 MB
EGAF00001882991 bam 576.7 MB
EGAF00001882992 bam 530.4 MB
EGAF00001882993 bam 289.2 MB
EGAF00001882994 bam 548.4 MB
EGAF00001882995 bam 493.9 MB
EGAF00001882996 bam 469.0 MB
EGAF00001882997 bam 585.2 MB
EGAF00001882998 bam 427.9 MB
EGAF00001882999 bam 630.1 MB
EGAF00001883000 bam 534.5 MB
EGAF00001883001 bam 511.2 MB
EGAF00001883002 bam 574.8 MB
EGAF00001883003 bam 570.9 MB
EGAF00001883004 bam 609.7 MB
EGAF00001883005 bam 435.6 MB
EGAF00001883006 bam 430.1 MB
EGAF00001883007 bam 482.3 MB
EGAF00001883008 bam 577.9 MB
EGAF00001883009 bam 403.7 MB
EGAF00001883010 bam 529.5 MB
EGAF00001883011 bam 899.9 MB
EGAF00001883012 bam 804.3 MB
EGAF00001883013 bam 663.9 MB
EGAF00001883014 bam 600.8 MB
EGAF00001883015 bam 390.3 MB
EGAF00001883016 bam 560.4 MB
EGAF00001883017 bam 717.1 MB
EGAF00001883018 bam 578.8 MB
EGAF00001883019 bam 531.1 MB
EGAF00001883020 bam 669.2 MB
EGAF00001883021 bam 506.5 MB
EGAF00001883022 bam 607.2 MB
EGAF00001883023 bam 459.2 MB
EGAF00001883024 bam 1.0 GB
EGAF00001883025 bam 650.2 MB
EGAF00001883026 bam 480.7 MB
186 Files (98.7 GB)