RRBS sequencing data of ovarian cancer, breast cancer, control tissues, and white blood cell DNA.
The dataset comprises 8 breast cancer, 11 ovarian cancer, 1 benign tumour, 18 normal tissue, 2 endometrium, and 23 white blood cell samples. Genome wide methylation analysis was performed by Reduced Representation Bisulfite Sequencing (RRBS) on Illumina HiSeq 2500. Data is provided as FASTQ files
- 28/11/2017
- 63 samples
- DAC: EGAC00001000781
- Technology: Illumina HiSeq 2500
EpiFemCare data access policy
Data will be released upon request, upon approval by the DAC (EpiFemCare clinical steering board). A DAA has to be signed between the requestor and the data provider. Subject data will always be anonymised.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00001721622 | fq.bz2 | 7.1 GB | ||
| EGAF00001721623 | fq.bz2 | 5.8 GB | ||
| EGAF00001721624 | fq.bz2 | 3.6 GB | ||
| EGAF00001721625 | fq.bz2 | 2.8 GB | ||
| EGAF00001721626 | fq.bz2 | 3.5 GB | ||
| EGAF00001721627 | fq.bz2 | 2.8 GB | ||
| EGAF00001721628 | fq.bz2 | 2.2 GB | ||
| EGAF00001721629 | fq.bz2 | 1.9 GB | ||
| EGAF00001721630 | fastq.bz2 | 462.9 MB | ||
| EGAF00001721631 | fastq.bz2 | 437.0 MB | ||
| EGAF00001721632 | fq.bz2 | 1.6 GB | ||
| EGAF00001721633 | fq.bz2 | 1.4 GB | ||
| EGAF00001721634 | fq.bz2 | 2.7 GB | ||
| EGAF00001721635 | fq.bz2 | 2.4 GB | ||
| EGAF00001721636 | fq.bz2 | 2.3 GB | ||
| EGAF00001721637 | fq.bz2 | 2.0 GB | ||
| EGAF00001721638 | fq.bz2 | 2.1 GB | ||
| EGAF00001721639 | fq.bz2 | 1.7 GB | ||
| EGAF00001721640 | fastq.bz2 | 514.0 MB | ||
| EGAF00001721641 | fastq.bz2 | 481.5 MB | ||
| EGAF00001721642 | fq.bz2 | 2.0 GB | ||
| EGAF00001721643 | fq.bz2 | 1.7 GB | ||
| EGAF00001721644 | fq.bz2 | 2.1 GB | ||
| EGAF00001721645 | fq.bz2 | 1.7 GB | ||
| EGAF00001721646 | fq.bz2 | 2.2 GB | ||
| EGAF00001721647 | fq.bz2 | 1.9 GB | ||
| EGAF00001721648 | fq.bz2 | 2.5 GB | ||
| EGAF00001721649 | fq.bz2 | 1.9 GB | ||
| EGAF00001721650 | fastq.bz2 | 857.3 MB | ||
| EGAF00001721651 | fastq.bz2 | 799.0 MB | ||
| EGAF00001721652 | fq.bz2 | 2.0 GB | ||
| EGAF00001721653 | fq.bz2 | 1.5 GB | ||
| EGAF00001721654 | fq.bz2 | 2.0 GB | ||
| EGAF00001721655 | fq.bz2 | 1.5 GB | ||
| EGAF00001721656 | fq.bz2 | 1.9 GB | ||
| EGAF00001721657 | fq.bz2 | 1.4 GB | ||
| EGAF00001721658 | fq.bz2 | 1.6 GB | ||
| EGAF00001721659 | fq.bz2 | 1.3 GB | ||
| EGAF00001721660 | fastq.bz2 | 795.0 MB | ||
| EGAF00001721661 | fastq.bz2 | 838.3 MB | ||
| EGAF00001721662 | fq.bz2 | 1.5 GB | ||
| EGAF00001721663 | fq.bz2 | 1.2 GB | ||
| EGAF00001721664 | fq.bz2 | 2.2 GB | ||
| EGAF00001721665 | fq.bz2 | 1.6 GB | ||
| EGAF00001721666 | fq.bz2 | 1.8 GB | ||
| EGAF00001721667 | fq.bz2 | 1.3 GB | ||
| EGAF00001721668 | fq.bz2 | 1.1 GB | ||
| EGAF00001721669 | fq.bz2 | 850.1 MB | ||
| EGAF00001721670 | fastq.bz2 | 490.1 MB | ||
| EGAF00001721671 | fastq.bz2 | 514.3 MB | ||
| EGAF00001721672 | fastq.bz2 | 702.0 MB | ||
| EGAF00001721673 | fastq.bz2 | 751.9 MB | ||
| EGAF00001721674 | fq.bz2 | 1.6 GB | ||
| EGAF00001721675 | fq.bz2 | 1.4 GB | ||
| EGAF00001721676 | fq.bz2 | 2.0 GB | ||
| EGAF00001721677 | fq.bz2 | 1.6 GB | ||
| EGAF00001721678 | fastq.bz2 | 31.5 MB | ||
| EGAF00001721679 | fastq.bz2 | 32.1 MB | ||
| EGAF00001721680 | fastq.bz2 | 106.5 MB | ||
| EGAF00001721681 | fastq.bz2 | 96.0 MB | ||
| EGAF00001721682 | fastq.bz2 | 75.1 MB | ||
| EGAF00001721683 | fastq.bz2 | 78.6 MB | ||
| EGAF00001721684 | fastq.bz2 | 801.8 MB | ||
| EGAF00001721685 | fastq.bz2 | 725.4 MB | ||
| EGAF00001721686 | fastq.bz2 | 540.7 MB | ||
| EGAF00001721687 | fastq.bz2 | 550.2 MB | ||
| EGAF00001721688 | fastq.bz2 | 323.1 MB | ||
| EGAF00001721689 | fastq.bz2 | 345.0 MB | ||
| EGAF00001721690 | fastq.bz2 | 1.5 GB | ||
| EGAF00001721691 | fastq.bz2 | 1.5 GB | ||
| EGAF00001721692 | fq.bz2 | 3.4 GB | ||
| EGAF00001721693 | fq.bz2 | 3.0 GB | ||
| EGAF00001721694 | fastq.bz2 | 1.3 GB | ||
| EGAF00001721695 | fastq.bz2 | 1.4 GB | ||
| EGAF00001721696 | fq.bz2 | 3.5 GB | ||
| EGAF00001721697 | fq.bz2 | 3.1 GB | ||
| EGAF00001721698 | fastq.bz2 | 1.3 GB | ||
| EGAF00001721699 | fastq.bz2 | 1.2 GB | ||
| EGAF00001721700 | fastq.bz2 | 213.5 MB | ||
| EGAF00001721701 | fastq.bz2 | 223.9 MB | ||
| EGAF00001721702 | fastq.bz2 | 218.1 MB | ||
| EGAF00001721703 | fastq.bz2 | 220.5 MB | ||
| EGAF00001721704 | fastq.bz2 | 771.9 MB | ||
| EGAF00001721705 | fastq.bz2 | 790.7 MB | ||
| EGAF00001721706 | fastq.bz2 | 517.8 MB | ||
| EGAF00001721707 | fastq.bz2 | 549.5 MB | ||
| EGAF00001721708 | fastq.bz2 | 219.1 MB | ||
| EGAF00001721709 | fastq.bz2 | 219.8 MB | ||
| EGAF00001721710 | fastq.bz2 | 894.8 MB | ||
| EGAF00001721711 | fastq.bz2 | 785.3 MB | ||
| EGAF00001721712 | fastq.bz2 | 304.9 MB | ||
| EGAF00001721713 | fastq.bz2 | 327.2 MB | ||
| EGAF00001721714 | fastq.bz2 | 1.0 GB | ||
| EGAF00001721715 | fastq.bz2 | 982.2 MB | ||
| EGAF00001721716 | fastq.bz2 | 636.2 MB | ||
| EGAF00001721717 | fastq.bz2 | 680.0 MB | ||
| EGAF00001721718 | fastq.bz2 | 71.8 MB | ||
| EGAF00001721719 | fastq.bz2 | 72.0 MB | ||
| EGAF00001721720 | fastq.bz2 | 272.9 MB | ||
| EGAF00001721721 | fastq.bz2 | 241.0 MB | ||
| EGAF00001721722 | fastq.bz2 | 1.7 GB | ||
| EGAF00001721723 | fastq.bz2 | 1.6 GB | ||
| EGAF00001721724 | fastq.bz2 | 1.3 GB | ||
| EGAF00001721725 | fastq.bz2 | 1.3 GB | ||
| EGAF00001721726 | fq.bz2 | 2.7 GB | ||
| EGAF00001721727 | fq.bz2 | 2.3 GB | ||
| EGAF00001721728 | fastq.bz2 | 650.0 MB | ||
| EGAF00001721729 | fastq.bz2 | 639.9 MB | ||
| EGAF00001721730 | fastq.bz2 | 521.1 MB | ||
| EGAF00001721731 | fastq.bz2 | 565.4 MB | ||
| EGAF00001721732 | fastq.bz2 | 1.4 GB | ||
| EGAF00001721733 | fastq.bz2 | 1.4 GB | ||
| EGAF00001721734 | fq.bz2 | 2.7 GB | ||
| EGAF00001721735 | fq.bz2 | 2.4 GB | ||
| EGAF00001721736 | fastq.bz2 | 942.4 MB | ||
| EGAF00001721737 | fastq.bz2 | 1.1 GB | ||
| EGAF00001721738 | fq.bz2 | 2.8 GB | ||
| EGAF00001721739 | fq.bz2 | 2.5 GB | ||
| EGAF00001721740 | fq.bz2 | 3.1 GB | ||
| EGAF00001721741 | fq.bz2 | 1.4 GB | ||
| EGAF00001721742 | fastq.bz2 | 958.6 MB | ||
| EGAF00001721743 | fastq.bz2 | 1.1 GB | ||
| EGAF00001721744 | fastq.bz2 | 2.6 GB | ||
| EGAF00001721745 | fastq.bz2 | 2.2 GB | ||
| EGAF00001721746 | fastq.bz2 | 1.0 GB | ||
| EGAF00001721747 | fastq.bz2 | 974.8 MB | ||
| EGAF00001721748 | fastq.bz2 | 407.2 MB | ||
| EGAF00001721749 | fastq.bz2 | 434.8 MB | ||
| EGAF00001721750 | fastq.bz2 | 1.6 GB | ||
| EGAF00001721751 | fastq.bz2 | 1.7 GB | ||
| EGAF00001721752 | fastq.bz2 | 610.0 MB | ||
| EGAF00001721753 | fastq.bz2 | 548.7 MB | ||
| EGAF00001721754 | fastq.bz2 | 872.8 MB | ||
| EGAF00001721755 | fastq.bz2 | 894.3 MB | ||
| EGAF00001721756 | fastq.bz2 | 1.5 GB | ||
| EGAF00001721757 | fastq.bz2 | 1.3 GB | ||
| EGAF00001721758 | fastq.bz2 | 426.6 MB | ||
| EGAF00001721759 | fastq.bz2 | 453.9 MB | ||
| EGAF00001721760 | fastq.bz2 | 878.4 MB | ||
| EGAF00001721761 | fastq.bz2 | 789.9 MB | ||
| EGAF00001721762 | fastq.bz2 | 797.8 MB | ||
| EGAF00001721763 | fastq.bz2 | 864.8 MB | ||
| EGAF00001721764 | fastq.bz2 | 1.3 GB | ||
| EGAF00001721765 | fastq.bz2 | 1.2 GB | ||
| EGAF00001721766 | fastq.bz2 | 319.3 MB | ||
| EGAF00001721767 | fastq.bz2 | 347.8 MB | ||
| EGAF00001721768 | fastq.bz2 | 825.4 MB | ||
| EGAF00001721769 | fastq.bz2 | 898.2 MB | ||
| EGAF00001721770 | fastq.bz2 | 1.5 GB | ||
| EGAF00001721771 | fastq.bz2 | 1.5 GB | ||
| EGAF00001721772 | fastq.bz2 | 228.3 MB | ||
| EGAF00001721773 | fastq.bz2 | 244.2 MB | ||
| EGAF00001721774 | fastq.bz2 | 3.6 GB | ||
| EGAF00001721775 | fastq.bz2 | 3.2 GB | ||
| EGAF00001721776 | fastq.bz2 | 1.4 GB | ||
| EGAF00001721777 | fastq.bz2 | 1.2 GB | ||
| EGAF00001721778 | fastq.bz2 | 362.8 MB | ||
| EGAF00001721779 | fastq.bz2 | 382.9 MB | ||
| EGAF00001721780 | fastq.bz2 | 699.4 MB | ||
| EGAF00001721781 | fastq.bz2 | 739.0 MB | ||
| EGAF00001721782 | fastq.bz2 | 638.0 MB | ||
| EGAF00001721783 | fastq.bz2 | 644.8 MB | ||
| EGAF00001721784 | fastq.bz2 | 1.4 GB | ||
| EGAF00001721785 | fastq.bz2 | 1.3 GB | ||
| EGAF00001721786 | fastq.bz2 | 387.5 MB | ||
| EGAF00001721787 | fastq.bz2 | 413.6 MB | ||
| EGAF00001721788 | fastq.bz2 | 904.3 MB | ||
| EGAF00001721789 | fastq.bz2 | 955.1 MB | ||
| EGAF00001721790 | fastq.bz2 | 951.2 MB | ||
| EGAF00001721791 | fastq.bz2 | 972.2 MB | ||
| EGAF00001721792 | fastq.bz2 | 1.1 GB | ||
| EGAF00001721793 | fastq.bz2 | 1.1 GB | ||
| EGAF00001721794 | fastq.bz2 | 1.5 GB | ||
| EGAF00001721795 | fastq.bz2 | 1.3 GB | ||
| EGAF00001721796 | fastq.bz2 | 218.1 MB | ||
| EGAF00001721797 | fastq.bz2 | 233.6 MB | ||
| EGAF00001721798 | fastq.bz2 | 672.0 MB | ||
| EGAF00001721799 | fastq.bz2 | 601.9 MB | ||
| EGAF00001721800 | fastq.bz2 | 934.0 MB | ||
| EGAF00001721801 | fastq.bz2 | 964.1 MB | ||
| EGAF00001721802 | fastq.bz2 | 868.8 MB | ||
| EGAF00001721803 | fastq.bz2 | 784.3 MB | ||
| EGAF00001721804 | fastq.bz2 | 448.8 MB | ||
| EGAF00001721805 | fastq.bz2 | 491.9 MB | ||
| EGAF00001721806 | fastq.bz2 | 938.6 MB | ||
| EGAF00001721807 | fastq.bz2 | 853.8 MB | ||
| EGAF00001721808 | fastq.bz2 | 456.3 MB | ||
| EGAF00001721809 | fastq.bz2 | 517.2 MB | ||
| EGAF00001721810 | fastq.bz2 | 1.1 GB | ||
| EGAF00001721811 | fastq.bz2 | 1.0 GB | ||
| EGAF00001721812 | fastq.bz2 | 362.1 MB | ||
| EGAF00001721813 | fastq.bz2 | 389.5 MB | ||
| EGAF00001721814 | fastq.bz2 | 888.2 MB | ||
| EGAF00001721815 | fastq.bz2 | 994.8 MB | ||
| EGAF00001721816 | fastq.bz2 | 942.4 MB | ||
| EGAF00001721817 | fastq.bz2 | 1.1 GB | ||
| EGAF00001721818 | fastq.bz2 | 1.3 GB | ||
| EGAF00001721819 | fastq.bz2 | 1.2 GB | ||
| EGAF00001721820 | fastq.bz2 | 360.9 MB | ||
| EGAF00001721821 | fastq.bz2 | 384.3 MB | ||
| EGAF00001721822 | fastq.bz2 | 916.9 MB | ||
| EGAF00001721823 | fastq.bz2 | 863.5 MB | ||
| EGAF00001721824 | fastq.bz2 | 1.4 GB | ||
| EGAF00001721825 | fastq.bz2 | 1.5 GB | ||
| EGAF00001721826 | fastq.bz2 | 698.5 MB | ||
| EGAF00001721827 | fastq.bz2 | 649.5 MB | ||
| EGAF00001721828 | fastq.bz2 | 1.1 GB | ||
| EGAF00001721829 | fastq.bz2 | 1.1 GB | ||
| EGAF00001721830 | fastq.bz2 | 719.1 MB | ||
| EGAF00001721831 | fastq.bz2 | 654.0 MB | ||
| EGAF00001721832 | fastq.bz2 | 614.2 MB | ||
| EGAF00001721833 | fastq.bz2 | 623.1 MB | ||
| EGAF00001721834 | fastq.bz2 | 147.9 MB | ||
| EGAF00001721835 | fastq.bz2 | 152.3 MB | ||
| EGAF00001721836 | fastq.bz2 | 731.0 MB | ||
| EGAF00001721837 | fastq.bz2 | 735.0 MB | ||
| EGAF00001721838 | fastq.bz2 | 158.8 MB | ||
| EGAF00001721839 | fastq.bz2 | 161.4 MB | ||
| EGAF00001721840 | fastq.bz2 | 1.5 GB | ||
| EGAF00001721841 | fastq.bz2 | 1.6 GB | ||
| EGAF00001721842 | fastq.bz2 | 350.1 MB | ||
| EGAF00001721843 | fastq.bz2 | 363.4 MB | ||
| EGAF00001721844 | fastq.bz2 | 1.5 GB | ||
| EGAF00001721845 | fastq.bz2 | 1.6 GB | ||
| EGAF00001721846 | fastq.bz2 | 1.8 GB | ||
| EGAF00001721847 | fastq.bz2 | 2.0 GB | ||
| EGAF00001721848 | fastq.bz2 | 1.3 GB | ||
| EGAF00001721849 | fastq.bz2 | 1.3 GB | ||
| EGAF00001721850 | fastq.bz2 | 1.5 GB | ||
| EGAF00001721851 | fastq.bz2 | 1.5 GB | ||
| EGAF00001721852 | fastq.bz2 | 385.7 MB | ||
| EGAF00001721853 | fastq.bz2 | 399.8 MB | ||
| EGAF00001721854 | fastq.bz2 | 534.0 MB | ||
| EGAF00001721855 | fastq.bz2 | 543.9 MB | ||
| EGAF00001721856 | fastq.bz2 | 1.2 GB | ||
| EGAF00001721857 | fastq.bz2 | 1.2 GB | ||
| EGAF00001721858 | fastq.bz2 | 407.7 MB | ||
| EGAF00001721859 | fastq.bz2 | 406.8 MB | ||
| EGAF00001721860 | fastq.bz2 | 444.1 MB | ||
| EGAF00001721861 | fastq.bz2 | 451.8 MB | ||
| 240 Files (279.3 GB) | ||||