ICGC PCAWG Dataset: RECA-EU_PCAWG_RNA-Seq_TopHat2
ICGC PCAWG Dataset for RNA-Seq BAM aligned using TopHat2. Project: RECA-EU.
- 06/09/2017
- 100 samples
- DAC: EGAC00001000010
- HMB DUO:0000006 (version: 2021-02-23)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
- NPUNCU DUO:0000018 (version: 2021-02-23)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
- PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
- GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.
ICGC Data Access
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001001692 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00001722421 | bam | 7.4 GB | ||
| EGAF00001722422 | bai | 5.1 MB | ||
| EGAF00001722423 | xml.gz | 3.5 kB | ||
| EGAF00001722427 | bam | 5.5 GB | ||
| EGAF00001722428 | bai | 4.5 MB | ||
| EGAF00001722429 | xml.gz | 3.5 kB | ||
| EGAF00001722433 | bam | 13.6 GB | ||
| EGAF00001722434 | bai | 5.9 MB | ||
| EGAF00001722435 | xml.gz | 3.5 kB | ||
| EGAF00001722439 | bam | 6.9 GB | ||
| EGAF00001722440 | bai | 5.1 MB | ||
| EGAF00001722441 | xml.gz | 3.5 kB | ||
| EGAF00001722445 | bam | 4.8 GB | ||
| EGAF00001722446 | bai | 4.7 MB | ||
| EGAF00001722447 | xml.gz | 3.5 kB | ||
| EGAF00001722451 | bam | 7.3 GB | ||
| EGAF00001722452 | bai | 5.1 MB | ||
| EGAF00001722453 | xml.gz | 3.5 kB | ||
| EGAF00001722457 | bam | 5.8 GB | ||
| EGAF00001722458 | bai | 4.6 MB | ||
| EGAF00001722459 | xml.gz | 3.5 kB | ||
| EGAF00001722463 | bam | 6.3 GB | ||
| EGAF00001722464 | bai | 4.6 MB | ||
| EGAF00001722465 | xml.gz | 3.5 kB | ||
| EGAF00001722469 | bam | 6.1 GB | ||
| EGAF00001722470 | bai | 4.6 MB | ||
| EGAF00001722471 | xml.gz | 3.5 kB | ||
| EGAF00001722475 | bam | 5.6 GB | ||
| EGAF00001722476 | bai | 4.7 MB | ||
| EGAF00001722477 | xml.gz | 3.5 kB | ||
| EGAF00001722481 | bam | 5.9 GB | ||
| EGAF00001722482 | bai | 5.2 MB | ||
| EGAF00001722483 | xml.gz | 3.5 kB | ||
| EGAF00001722487 | bam | 9.4 GB | ||
| EGAF00001722488 | bai | 5.2 MB | ||
| EGAF00001722489 | xml.gz | 3.5 kB | ||
| EGAF00001722493 | bam | 11.5 GB | ||
| EGAF00001722494 | bai | 6.0 MB | ||
| EGAF00001722495 | xml.gz | 3.5 kB | ||
| EGAF00001722499 | bam | 5.4 GB | ||
| EGAF00001722500 | bai | 4.7 MB | ||
| EGAF00001722501 | xml.gz | 3.5 kB | ||
| EGAF00001722505 | bam | 7.4 GB | ||
| EGAF00001722506 | bai | 4.9 MB | ||
| EGAF00001722507 | xml.gz | 3.5 kB | ||
| EGAF00001722511 | bam | 6.4 GB | ||
| EGAF00001722512 | bai | 4.8 MB | ||
| EGAF00001722513 | xml.gz | 3.5 kB | ||
| EGAF00001722514 | bam | 7.7 GB | ||
| EGAF00001722515 | bai | 5.1 MB | ||
| EGAF00001722516 | xml.gz | 3.5 kB | ||
| EGAF00001722517 | bam | 4.3 GB | ||
| EGAF00001722518 | bai | 4.7 MB | ||
| EGAF00001722519 | xml.gz | 3.5 kB | ||
| EGAF00001722520 | bam | 5.3 GB | ||
| EGAF00001722521 | bai | 4.7 MB | ||
| EGAF00001722522 | xml.gz | 3.5 kB | ||
| EGAF00001722523 | bam | 6.7 GB | ||
| EGAF00001722524 | bai | 4.9 MB | ||
| EGAF00001722525 | xml.gz | 3.5 kB | ||
| EGAF00001722526 | bam | 7.8 GB | ||
| EGAF00001722527 | bai | 5.0 MB | ||
| EGAF00001722528 | xml.gz | 3.5 kB | ||
| EGAF00001722529 | bam | 11.1 GB | ||
| EGAF00001722530 | bai | 4.2 MB | ||
| EGAF00001722531 | xml.gz | 3.5 kB | ||
| EGAF00001722532 | bam | 6.1 GB | ||
| EGAF00001722533 | bai | 4.8 MB | ||
| EGAF00001722534 | xml.gz | 3.5 kB | ||
| EGAF00001722535 | bam | 9.0 GB | ||
| EGAF00001722536 | bai | 5.3 MB | ||
| EGAF00001722537 | xml.gz | 3.5 kB | ||
| EGAF00001722538 | bam | 6.4 GB | ||
| EGAF00001722539 | bai | 4.6 MB | ||
| EGAF00001722540 | xml.gz | 3.5 kB | ||
| EGAF00001722541 | bam | 5.7 GB | ||
| EGAF00001722542 | bai | 4.6 MB | ||
| EGAF00001722543 | xml.gz | 3.5 kB | ||
| EGAF00001722544 | bam | 9.3 GB | ||
| EGAF00001722545 | bai | 5.1 MB | ||
| EGAF00001722546 | xml.gz | 3.5 kB | ||
| EGAF00001722547 | bam | 7.2 GB | ||
| EGAF00001722548 | bai | 5.2 MB | ||
| EGAF00001722549 | xml.gz | 3.5 kB | ||
| EGAF00001722550 | bam | 5.0 GB | ||
| EGAF00001722551 | bai | 4.9 MB | ||
| EGAF00001722552 | xml.gz | 3.5 kB | ||
| EGAF00001722856 | bam | 5.8 GB | ||
| EGAF00001722857 | bai | 4.8 MB | ||
| EGAF00001722858 | xml.gz | 3.5 kB | ||
| EGAF00001722859 | bam | 8.0 GB | ||
| EGAF00001722860 | bai | 5.0 MB | ||
| EGAF00001722861 | xml.gz | 3.5 kB | ||
| EGAF00001722862 | bam | 6.2 GB | ||
| EGAF00001722863 | bai | 4.8 MB | ||
| EGAF00001722864 | xml.gz | 3.5 kB | ||
| EGAF00001722865 | bam | 13.1 GB | ||
| EGAF00001722866 | bai | 5.9 MB | ||
| EGAF00001722867 | xml.gz | 3.5 kB | ||
| EGAF00001722868 | bam | 10.3 GB | ||
| EGAF00001722869 | bai | 5.3 MB | ||
| EGAF00001722870 | xml.gz | 3.5 kB | ||
| EGAF00001722871 | bam | 6.8 GB | ||
| EGAF00001722872 | bai | 4.8 MB | ||
| EGAF00001722873 | xml.gz | 3.5 kB | ||
| EGAF00001722874 | bam | 4.8 GB | ||
| EGAF00001722875 | bai | 5.0 MB | ||
| EGAF00001722876 | xml.gz | 3.5 kB | ||
| EGAF00001722877 | bam | 5.3 GB | ||
| EGAF00001722878 | bai | 4.9 MB | ||
| EGAF00001722879 | xml.gz | 3.5 kB | ||
| EGAF00001722880 | bam | 11.7 GB | ||
| EGAF00001722881 | bai | 4.7 MB | ||
| EGAF00001722882 | xml.gz | 3.5 kB | ||
| EGAF00001722883 | bam | 7.1 GB | ||
| EGAF00001722884 | bai | 5.2 MB | ||
| EGAF00001722885 | xml.gz | 3.5 kB | ||
| EGAF00001723249 | bam | 3.4 GB | ||
| EGAF00001723250 | bai | 4.7 MB | ||
| EGAF00001723251 | xml.gz | 3.5 kB | ||
| EGAF00001723255 | bam | 6.6 GB | ||
| EGAF00001723256 | bai | 4.8 MB | ||
| EGAF00001723257 | xml.gz | 3.5 kB | ||
| EGAF00001723261 | bam | 7.2 GB | ||
| EGAF00001723262 | bai | 4.8 MB | ||
| EGAF00001723263 | xml.gz | 3.5 kB | ||
| EGAF00001723267 | bam | 7.2 GB | ||
| EGAF00001723268 | bai | 5.1 MB | ||
| EGAF00001723269 | xml.gz | 3.5 kB | ||
| EGAF00001723273 | bam | 6.1 GB | ||
| EGAF00001723274 | bai | 5.1 MB | ||
| EGAF00001723275 | xml.gz | 3.5 kB | ||
| EGAF00001723279 | bam | 7.0 GB | ||
| EGAF00001723280 | bai | 5.2 MB | ||
| EGAF00001723281 | xml.gz | 3.5 kB | ||
| EGAF00001723285 | bam | 4.7 GB | ||
| EGAF00001723286 | bai | 4.7 MB | ||
| EGAF00001723287 | xml.gz | 3.5 kB | ||
| EGAF00001723291 | bam | 14.4 GB | ||
| EGAF00001723292 | bai | 5.9 MB | ||
| EGAF00001723293 | xml.gz | 3.5 kB | ||
| EGAF00001723297 | bam | 7.0 GB | ||
| EGAF00001723298 | bai | 4.7 MB | ||
| EGAF00001723299 | xml.gz | 3.5 kB | ||
| EGAF00001723303 | bam | 7.7 GB | ||
| EGAF00001723304 | bai | 5.4 MB | ||
| EGAF00001723305 | xml.gz | 3.5 kB | ||
| EGAF00001723309 | bam | 7.2 GB | ||
| EGAF00001723310 | bai | 4.6 MB | ||
| EGAF00001723311 | xml.gz | 3.5 kB | ||
| EGAF00001723315 | bam | 3.0 GB | ||
| EGAF00001723316 | bai | 4.3 MB | ||
| EGAF00001723317 | xml.gz | 3.5 kB | ||
| EGAF00001723321 | bam | 5.0 GB | ||
| EGAF00001723322 | bai | 4.6 MB | ||
| EGAF00001723323 | xml.gz | 3.5 kB | ||
| EGAF00001723327 | bam | 7.4 GB | ||
| EGAF00001723328 | bai | 5.3 MB | ||
| EGAF00001723329 | xml.gz | 3.5 kB | ||
| EGAF00001723333 | bam | 7.4 GB | ||
| EGAF00001723334 | bai | 5.8 MB | ||
| EGAF00001723335 | xml.gz | 3.5 kB | ||
| EGAF00001723339 | bam | 8.0 GB | ||
| EGAF00001723340 | bai | 5.3 MB | ||
| EGAF00001723341 | xml.gz | 3.5 kB | ||
| EGAF00001723345 | bam | 4.2 GB | ||
| EGAF00001723346 | bai | 4.3 MB | ||
| EGAF00001723347 | xml.gz | 3.5 kB | ||
| EGAF00001723348 | bam | 5.5 GB | ||
| EGAF00001723349 | bai | 4.4 MB | ||
| EGAF00001723350 | xml.gz | 3.5 kB | ||
| EGAF00001723357 | bam | 7.6 GB | ||
| EGAF00001723358 | bai | 4.9 MB | ||
| EGAF00001723359 | xml.gz | 3.5 kB | ||
| EGAF00001723363 | bam | 8.3 GB | ||
| EGAF00001723364 | bai | 5.2 MB | ||
| EGAF00001723365 | xml.gz | 3.5 kB | ||
| EGAF00001723366 | bam | 7.7 GB | ||
| EGAF00001723367 | bai | 4.7 MB | ||
| EGAF00001723368 | xml.gz | 3.5 kB | ||
| EGAF00001723372 | bam | 4.5 GB | ||
| EGAF00001723373 | bai | 5.0 MB | ||
| EGAF00001723374 | xml.gz | 3.5 kB | ||
| EGAF00001723381 | bam | 6.3 GB | ||
| EGAF00001723382 | bai | 5.0 MB | ||
| EGAF00001723383 | xml.gz | 3.5 kB | ||
| EGAF00001723387 | bam | 5.1 GB | ||
| EGAF00001723388 | bai | 4.7 MB | ||
| EGAF00001723389 | xml.gz | 3.5 kB | ||
| EGAF00001723390 | bam | 4.1 GB | ||
| EGAF00001723391 | bai | 4.8 MB | ||
| EGAF00001723392 | xml.gz | 3.5 kB | ||
| EGAF00001723396 | bam | 11.5 GB | ||
| EGAF00001723397 | bai | 5.0 MB | ||
| EGAF00001723398 | xml.gz | 3.5 kB | ||
| EGAF00001723402 | bam | 5.3 GB | ||
| EGAF00001723403 | bai | 4.9 MB | ||
| EGAF00001723404 | xml.gz | 3.5 kB | ||
| EGAF00001723408 | bam | 6.6 GB | ||
| EGAF00001723409 | bai | 4.9 MB | ||
| EGAF00001723410 | xml.gz | 3.5 kB | ||
| EGAF00001723414 | bam | 12.4 GB | ||
| EGAF00001723415 | bai | 5.3 MB | ||
| EGAF00001723416 | xml.gz | 3.5 kB | ||
| EGAF00001723420 | bam | 6.3 GB | ||
| EGAF00001723421 | bai | 4.6 MB | ||
| EGAF00001723422 | xml.gz | 3.5 kB | ||
| EGAF00001723426 | bam | 6.7 GB | ||
| EGAF00001723427 | bai | 5.4 MB | ||
| EGAF00001723428 | xml.gz | 3.5 kB | ||
| EGAF00001723432 | bam | 4.9 GB | ||
| EGAF00001723433 | bai | 5.7 MB | ||
| EGAF00001723434 | xml.gz | 3.5 kB | ||
| EGAF00001723438 | bam | 7.6 GB | ||
| EGAF00001723439 | bai | 4.9 MB | ||
| EGAF00001723440 | xml.gz | 3.5 kB | ||
| EGAF00001723441 | bam | 5.5 GB | ||
| EGAF00001723442 | bai | 4.5 MB | ||
| EGAF00001723443 | xml.gz | 3.5 kB | ||
| EGAF00001723447 | bam | 5.6 GB | ||
| EGAF00001723448 | bai | 4.5 MB | ||
| EGAF00001723449 | xml.gz | 3.5 kB | ||
| EGAF00001723453 | bam | 5.2 GB | ||
| EGAF00001723454 | bai | 4.5 MB | ||
| EGAF00001723455 | xml.gz | 3.5 kB | ||
| EGAF00001723459 | bam | 3.5 GB | ||
| EGAF00001723460 | bai | 4.1 MB | ||
| EGAF00001723461 | xml.gz | 3.5 kB | ||
| EGAF00001723465 | bam | 7.5 GB | ||
| EGAF00001723466 | bai | 5.1 MB | ||
| EGAF00001723467 | xml.gz | 3.5 kB | ||
| EGAF00001723471 | bam | 6.1 GB | ||
| EGAF00001723472 | bai | 4.6 MB | ||
| EGAF00001723473 | xml.gz | 3.5 kB | ||
| EGAF00001723477 | bam | 8.9 GB | ||
| EGAF00001723478 | bai | 4.8 MB | ||
| EGAF00001723479 | xml.gz | 3.5 kB | ||
| EGAF00001723483 | bam | 9.0 GB | ||
| EGAF00001723484 | bai | 4.9 MB | ||
| EGAF00001723485 | xml.gz | 3.5 kB | ||
| EGAF00001723489 | bam | 13.5 GB | ||
| EGAF00001723490 | bai | 5.6 MB | ||
| EGAF00001723491 | xml.gz | 3.5 kB | ||
| EGAF00001723495 | bam | 5.0 GB | ||
| EGAF00001723496 | bai | 5.0 MB | ||
| EGAF00001723497 | xml.gz | 3.5 kB | ||
| EGAF00001723501 | bam | 8.0 GB | ||
| EGAF00001723502 | bai | 5.1 MB | ||
| EGAF00001723503 | xml.gz | 3.5 kB | ||
| EGAF00001723507 | bam | 9.4 GB | ||
| EGAF00001723508 | bai | 5.3 MB | ||
| EGAF00001723509 | xml.gz | 3.5 kB | ||
| EGAF00001723513 | bam | 5.9 GB | ||
| EGAF00001723514 | bai | 4.5 MB | ||
| EGAF00001723515 | xml.gz | 3.5 kB | ||
| EGAF00001723519 | bam | 5.4 GB | ||
| EGAF00001723520 | bai | 5.0 MB | ||
| EGAF00001723521 | xml.gz | 3.5 kB | ||
| EGAF00001723525 | bam | 7.4 GB | ||
| EGAF00001723526 | bai | 4.6 MB | ||
| EGAF00001723527 | xml.gz | 3.5 kB | ||
| EGAF00001723531 | bam | 4.5 GB | ||
| EGAF00001723532 | bai | 4.8 MB | ||
| EGAF00001723533 | xml.gz | 3.5 kB | ||
| EGAF00001723537 | bam | 5.2 GB | ||
| EGAF00001723538 | bai | 5.1 MB | ||
| EGAF00001723539 | xml.gz | 3.5 kB | ||
| EGAF00001723543 | bam | 5.9 GB | ||
| EGAF00001723544 | bai | 4.9 MB | ||
| EGAF00001723545 | xml.gz | 3.5 kB | ||
| EGAF00001723549 | bam | 10.9 GB | ||
| EGAF00001723550 | bai | 7.0 MB | ||
| EGAF00001723551 | xml.gz | 3.5 kB | ||
| EGAF00001723555 | bam | 6.6 GB | ||
| EGAF00001723556 | bai | 4.8 MB | ||
| EGAF00001723557 | xml.gz | 3.5 kB | ||
| EGAF00001723561 | bam | 6.2 GB | ||
| EGAF00001723562 | bai | 4.8 MB | ||
| EGAF00001723563 | xml.gz | 3.5 kB | ||
| EGAF00001723573 | bam | 5.8 GB | ||
| EGAF00001723574 | bai | 5.4 MB | ||
| EGAF00001723575 | xml.gz | 3.5 kB | ||
| EGAF00001723579 | bam | 7.4 GB | ||
| EGAF00001723580 | bai | 5.0 MB | ||
| EGAF00001723581 | xml.gz | 3.5 kB | ||
| EGAF00001723585 | bam | 7.0 GB | ||
| EGAF00001723586 | bai | 5.2 MB | ||
| EGAF00001723587 | xml.gz | 3.5 kB | ||
| EGAF00001723591 | bam | 8.0 GB | ||
| EGAF00001723592 | bai | 5.2 MB | ||
| EGAF00001723593 | xml.gz | 3.5 kB | ||
| EGAF00001723597 | bam | 4.6 GB | ||
| EGAF00001723598 | bai | 4.6 MB | ||
| EGAF00001723599 | xml.gz | 3.5 kB | ||
| EGAF00001723603 | bam | 7.8 GB | ||
| EGAF00001723604 | bai | 5.3 MB | ||
| EGAF00001723605 | xml.gz | 3.5 kB | ||
| EGAF00001723609 | bam | 14.9 GB | ||
| EGAF00001723610 | bai | 5.9 MB | ||
| EGAF00001723611 | xml.gz | 3.5 kB | ||
| 300 Files (710.8 GB) | ||||