ICGC PCAWG Dataset: CLLE-ES_PCAWG_RNA-Seq_TopHat2
ICGC PCAWG Dataset for RNA-Seq BAM aligned using TopHat2. Project: CLLE-ES.
- 06/09/2017
- 74 samples
- DAC: EGAC00001000010
- HMB DUO:0000006 (version: 2021-02-23)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
- NPUNCU DUO:0000018 (version: 2021-02-23)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
- PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
- GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.
ICGC Data Access
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001001692 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00001719978 | bam | 12.0 GB | ||
| EGAF00001719979 | bai | 5.8 MB | ||
| EGAF00001719980 | xml.gz | 3.5 kB | ||
| EGAF00001719981 | bam | 10.2 GB | ||
| EGAF00001719982 | bai | 5.4 MB | ||
| EGAF00001719983 | xml.gz | 3.6 kB | ||
| EGAF00001719984 | bam | 6.1 GB | ||
| EGAF00001719985 | bai | 5.3 MB | ||
| EGAF00001719986 | xml.gz | 3.5 kB | ||
| EGAF00001719987 | bam | 4.7 GB | ||
| EGAF00001719988 | bai | 4.9 MB | ||
| EGAF00001719989 | xml.gz | 3.5 kB | ||
| EGAF00001719990 | bam | 4.7 GB | ||
| EGAF00001719991 | bai | 5.0 MB | ||
| EGAF00001719992 | xml.gz | 3.5 kB | ||
| EGAF00001719993 | bam | 10.8 GB | ||
| EGAF00001719994 | bai | 5.9 MB | ||
| EGAF00001719995 | xml.gz | 3.5 kB | ||
| EGAF00001719996 | bam | 9.7 GB | ||
| EGAF00001719997 | bai | 5.4 MB | ||
| EGAF00001719998 | xml.gz | 3.5 kB | ||
| EGAF00001719999 | bam | 8.8 GB | ||
| EGAF00001720000 | bai | 6.9 MB | ||
| EGAF00001720001 | xml.gz | 3.5 kB | ||
| EGAF00001720002 | bam | 3.9 GB | ||
| EGAF00001720003 | bai | 4.8 MB | ||
| EGAF00001720004 | xml.gz | 3.5 kB | ||
| EGAF00001720005 | bam | 8.4 GB | ||
| EGAF00001720006 | bai | 5.5 MB | ||
| EGAF00001720007 | xml.gz | 3.6 kB | ||
| EGAF00001720008 | bam | 5.0 GB | ||
| EGAF00001720009 | bai | 4.9 MB | ||
| EGAF00001720010 | xml.gz | 3.5 kB | ||
| EGAF00001720011 | bam | 5.2 GB | ||
| EGAF00001720012 | bai | 4.8 MB | ||
| EGAF00001720013 | xml.gz | 3.5 kB | ||
| EGAF00001720014 | bam | 15.4 GB | ||
| EGAF00001720015 | bai | 5.7 MB | ||
| EGAF00001720016 | xml.gz | 3.7 kB | ||
| EGAF00001720017 | bam | 8.1 GB | ||
| EGAF00001720018 | bai | 5.6 MB | ||
| EGAF00001720019 | xml.gz | 3.6 kB | ||
| EGAF00001720020 | bam | 6.2 GB | ||
| EGAF00001720021 | bai | 5.3 MB | ||
| EGAF00001720022 | xml.gz | 3.5 kB | ||
| EGAF00001720023 | bam | 7.8 GB | ||
| EGAF00001720024 | bai | 6.7 MB | ||
| EGAF00001720025 | xml.gz | 3.6 kB | ||
| EGAF00001720026 | bam | 12.9 GB | ||
| EGAF00001720027 | bai | 6.0 MB | ||
| EGAF00001720028 | xml.gz | 3.6 kB | ||
| EGAF00001720029 | bam | 5.0 GB | ||
| EGAF00001720030 | bai | 5.1 MB | ||
| EGAF00001720031 | xml.gz | 3.5 kB | ||
| EGAF00001720032 | bam | 7.7 GB | ||
| EGAF00001720033 | bai | 5.7 MB | ||
| EGAF00001720034 | xml.gz | 3.6 kB | ||
| EGAF00001720035 | bam | 6.5 GB | ||
| EGAF00001720036 | bai | 5.2 MB | ||
| EGAF00001720037 | xml.gz | 3.5 kB | ||
| EGAF00001720038 | bam | 8.0 GB | ||
| EGAF00001720039 | bai | 5.1 MB | ||
| EGAF00001720040 | xml.gz | 3.5 kB | ||
| EGAF00001720041 | bam | 11.4 GB | ||
| EGAF00001720042 | bai | 5.3 MB | ||
| EGAF00001720043 | xml.gz | 3.5 kB | ||
| EGAF00001720044 | bam | 9.3 GB | ||
| EGAF00001720045 | bai | 5.7 MB | ||
| EGAF00001720046 | xml.gz | 3.5 kB | ||
| EGAF00001720047 | bam | 6.8 GB | ||
| EGAF00001720048 | bai | 5.5 MB | ||
| EGAF00001720049 | xml.gz | 3.6 kB | ||
| EGAF00001720050 | bam | 9.3 GB | ||
| EGAF00001720051 | bai | 5.5 MB | ||
| EGAF00001720052 | xml.gz | 3.5 kB | ||
| EGAF00001720053 | bam | 8.0 GB | ||
| EGAF00001720054 | bai | 6.3 MB | ||
| EGAF00001720055 | xml.gz | 3.6 kB | ||
| EGAF00001720056 | bam | 8.3 GB | ||
| EGAF00001720057 | bai | 7.0 MB | ||
| EGAF00001720058 | xml.gz | 3.6 kB | ||
| EGAF00001720059 | bam | 17.8 GB | ||
| EGAF00001720060 | bai | 5.8 MB | ||
| EGAF00001720061 | xml.gz | 3.5 kB | ||
| EGAF00001720062 | bam | 5.1 GB | ||
| EGAF00001720063 | bai | 4.9 MB | ||
| EGAF00001720064 | xml.gz | 3.5 kB | ||
| EGAF00001720065 | bam | 8.6 GB | ||
| EGAF00001720066 | bai | 5.3 MB | ||
| EGAF00001720067 | xml.gz | 3.5 kB | ||
| EGAF00001720068 | bam | 9.4 GB | ||
| EGAF00001720069 | bai | 5.4 MB | ||
| EGAF00001720070 | xml.gz | 3.5 kB | ||
| EGAF00001720071 | bam | 7.0 GB | ||
| EGAF00001720072 | bai | 5.4 MB | ||
| EGAF00001720073 | xml.gz | 3.5 kB | ||
| EGAF00001720074 | bam | 8.0 GB | ||
| EGAF00001720075 | bai | 5.4 MB | ||
| EGAF00001720076 | xml.gz | 3.5 kB | ||
| EGAF00001720077 | bam | 6.3 GB | ||
| EGAF00001720078 | bai | 5.2 MB | ||
| EGAF00001720079 | xml.gz | 3.5 kB | ||
| EGAF00001720080 | bam | 9.5 GB | ||
| EGAF00001720081 | bai | 6.0 MB | ||
| EGAF00001720082 | xml.gz | 3.6 kB | ||
| EGAF00001720083 | bam | 8.3 GB | ||
| EGAF00001720084 | bai | 5.7 MB | ||
| EGAF00001720085 | xml.gz | 3.6 kB | ||
| EGAF00001720086 | bam | 4.9 GB | ||
| EGAF00001720087 | bai | 5.0 MB | ||
| EGAF00001720088 | xml.gz | 3.5 kB | ||
| EGAF00001720089 | bam | 8.2 GB | ||
| EGAF00001720090 | bai | 5.9 MB | ||
| EGAF00001720091 | xml.gz | 3.6 kB | ||
| EGAF00001720092 | bam | 4.8 GB | ||
| EGAF00001720093 | bai | 4.9 MB | ||
| EGAF00001720094 | xml.gz | 3.5 kB | ||
| EGAF00001720095 | bam | 10.5 GB | ||
| EGAF00001720096 | bai | 5.6 MB | ||
| EGAF00001720097 | xml.gz | 3.6 kB | ||
| EGAF00001720098 | bam | 7.6 GB | ||
| EGAF00001720099 | bai | 5.7 MB | ||
| EGAF00001720100 | xml.gz | 3.6 kB | ||
| EGAF00001720101 | bam | 5.0 GB | ||
| EGAF00001720102 | bai | 5.0 MB | ||
| EGAF00001720103 | xml.gz | 3.5 kB | ||
| EGAF00001720104 | bam | 10.4 GB | ||
| EGAF00001720105 | bai | 5.5 MB | ||
| EGAF00001720106 | xml.gz | 3.6 kB | ||
| EGAF00001720107 | bam | 9.8 GB | ||
| EGAF00001720108 | bai | 5.5 MB | ||
| EGAF00001720109 | xml.gz | 3.5 kB | ||
| EGAF00001720110 | bam | 7.7 GB | ||
| EGAF00001720111 | bai | 5.5 MB | ||
| EGAF00001720112 | xml.gz | 3.6 kB | ||
| EGAF00001720113 | bam | 8.9 GB | ||
| EGAF00001720114 | bai | 5.6 MB | ||
| EGAF00001720115 | xml.gz | 3.5 kB | ||
| EGAF00001720116 | bam | 10.3 GB | ||
| EGAF00001720117 | bai | 5.7 MB | ||
| EGAF00001720118 | xml.gz | 3.5 kB | ||
| EGAF00001720119 | bam | 7.5 GB | ||
| EGAF00001720120 | bai | 5.3 MB | ||
| EGAF00001720121 | xml.gz | 3.5 kB | ||
| EGAF00001720122 | bam | 7.7 GB | ||
| EGAF00001720123 | bai | 5.2 MB | ||
| EGAF00001720124 | xml.gz | 3.5 kB | ||
| EGAF00001720125 | bam | 7.6 GB | ||
| EGAF00001720126 | bai | 5.5 MB | ||
| EGAF00001720127 | xml.gz | 3.6 kB | ||
| EGAF00001720128 | bam | 5.8 GB | ||
| EGAF00001720129 | bai | 4.8 MB | ||
| EGAF00001720130 | xml.gz | 3.5 kB | ||
| EGAF00001720131 | bam | 6.8 GB | ||
| EGAF00001720132 | bai | 5.2 MB | ||
| EGAF00001720133 | xml.gz | 3.5 kB | ||
| EGAF00001720134 | bam | 10.0 GB | ||
| EGAF00001720135 | bai | 5.7 MB | ||
| EGAF00001720136 | xml.gz | 3.5 kB | ||
| EGAF00001720137 | bam | 6.8 GB | ||
| EGAF00001720138 | bai | 5.4 MB | ||
| EGAF00001720139 | xml.gz | 3.5 kB | ||
| EGAF00001720140 | bam | 13.2 GB | ||
| EGAF00001720141 | bai | 5.9 MB | ||
| EGAF00001720142 | xml.gz | 3.6 kB | ||
| EGAF00001720143 | bam | 16.1 GB | ||
| EGAF00001720144 | bai | 6.0 MB | ||
| EGAF00001720145 | xml.gz | 3.6 kB | ||
| EGAF00001720146 | bam | 8.4 GB | ||
| EGAF00001720147 | bai | 5.3 MB | ||
| EGAF00001720148 | xml.gz | 3.5 kB | ||
| EGAF00001720149 | bam | 13.6 GB | ||
| EGAF00001720150 | bai | 5.7 MB | ||
| EGAF00001720151 | xml.gz | 3.6 kB | ||
| EGAF00001720152 | bam | 7.5 GB | ||
| EGAF00001720153 | bai | 5.4 MB | ||
| EGAF00001720154 | xml.gz | 3.6 kB | ||
| EGAF00001720155 | bam | 5.1 GB | ||
| EGAF00001720156 | bai | 5.2 MB | ||
| EGAF00001720157 | xml.gz | 3.5 kB | ||
| EGAF00001720158 | bam | 7.5 GB | ||
| EGAF00001720159 | bai | 5.4 MB | ||
| EGAF00001720160 | xml.gz | 3.6 kB | ||
| EGAF00001720161 | bam | 8.5 GB | ||
| EGAF00001720162 | bai | 5.5 MB | ||
| EGAF00001720163 | xml.gz | 3.6 kB | ||
| EGAF00001720164 | bam | 10.3 GB | ||
| EGAF00001720165 | bai | 5.6 MB | ||
| EGAF00001720166 | xml.gz | 3.5 kB | ||
| EGAF00001720167 | bam | 10.9 GB | ||
| EGAF00001720168 | bai | 5.7 MB | ||
| EGAF00001720169 | xml.gz | 3.5 kB | ||
| EGAF00001720170 | bam | 13.2 GB | ||
| EGAF00001720171 | bai | 5.8 MB | ||
| EGAF00001720172 | xml.gz | 3.6 kB | ||
| EGAF00001720173 | bam | 7.2 GB | ||
| EGAF00001720174 | bai | 5.5 MB | ||
| EGAF00001720175 | xml.gz | 3.6 kB | ||
| EGAF00001720176 | bam | 16.9 GB | ||
| EGAF00001720177 | bai | 5.9 MB | ||
| EGAF00001720178 | xml.gz | 3.7 kB | ||
| EGAF00001720179 | bam | 7.6 GB | ||
| EGAF00001720180 | bai | 5.4 MB | ||
| EGAF00001720181 | xml.gz | 3.6 kB | ||
| EGAF00001720182 | bam | 12.2 GB | ||
| EGAF00001720183 | bai | 5.6 MB | ||
| EGAF00001720184 | xml.gz | 3.6 kB | ||
| EGAF00001720185 | bam | 7.9 GB | ||
| EGAF00001720186 | bai | 7.0 MB | ||
| EGAF00001720187 | xml.gz | 3.6 kB | ||
| EGAF00001720188 | bam | 11.4 GB | ||
| EGAF00001720189 | bai | 5.6 MB | ||
| EGAF00001720190 | xml.gz | 3.5 kB | ||
| EGAF00001720191 | bam | 9.8 GB | ||
| EGAF00001720192 | bai | 5.4 MB | ||
| EGAF00001720193 | xml.gz | 3.6 kB | ||
| EGAF00001720194 | bam | 8.1 GB | ||
| EGAF00001720195 | bai | 5.5 MB | ||
| EGAF00001720196 | xml.gz | 3.6 kB | ||
| EGAF00001720197 | bam | 5.8 GB | ||
| EGAF00001720198 | bai | 6.0 MB | ||
| EGAF00001720199 | xml.gz | 3.5 kB | ||
| 222 Files (642.2 GB) | ||||