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Aligned reads from specific genomic locations derived from Illumina HiSeqX and HiSeq2000 whole genome sequence data

This dataset includes bam files from 3,001 samples. These bam files include all read pairs where at least one of the reads aligns within 1kb of the C9orf72 repeat expansion. Additionally, these bam files also contain reads that are aligned to any of 29 pre-determined off target locations where the aligners are known to mis-align reads associated with this repeat expansion. These samples were sequenced using a combination of 2x100bp reads on an Illumina HiSeq2000 and 2x150bp reads on an Illumina HiSeqX sequencer and aligned using the Isaac aligner.

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Project MinE Data Access Policy

Project MinE is the largest ongoing genetic study into ALS worldwide, striving to include a total of 22,500 whole genome sequenced DNA profiles. To promote broad, transparant and responsible data sharing Project MinE has released the Project MinE Variant Browser and posts summary data of Project MinE manuscripts shortly after publication. Please inform us about your intended use of Project Mine summary data by sending an email to info@projectmine.com. Doing so will help us to keep track of ongoing research initiatives and allow us to facilitate collaboration of researchers, whenever possible. If you would like additional results, please subject a short, informal research proposal. Citations in publications When you report results of data that utilizes publicly available Project MinE data in any way, it is our policy that you: - Acknowledge the Project MinE GWAS Consortium by: o Listing the Project MinE GWAS Consortium as a banner co-author OR o Including the following statement in the acknowledgements: The authors would like to thank the Project MinE GWAS Consortium. - Cite the relevant publication of the original results. Requests for additional (not publicly available) data Would your project require a subset of the publicly available results or additional information than those that are publicly available, please email a request containing a short, informal description of your project. Upon approval, a file will be delivered in the same format as the publicly available data. In this case, we will ask if the Project MinE GWAS Consortium is properly acknowledged as stated above and in addition, we would appreciate if individual co-authorship is offered to individuals who are involved in facilitating the additional analysis required for such projects Privacy To protect subject confidentiality, we do not release sample allele frequencies.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002598 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00001714407 bam 162.5 kB
EGAF00001714408 bam 223.8 kB
EGAF00001714409 bam 163.2 kB
EGAF00001714410 bam 137.7 kB
EGAF00001714411 bam 119.4 kB
EGAF00001714412 bam 138.5 kB
EGAF00001714413 bam 149.1 kB
EGAF00001714414 bam 183.3 kB
EGAF00001714415 bam 296.3 kB
EGAF00001714416 bam 137.5 kB
EGAF00001714417 bam 193.4 kB
EGAF00001714418 bam 135.5 kB
EGAF00001714419 bam 200.8 kB
EGAF00001714420 bam 160.5 kB
EGAF00001714421 bam 183.9 kB
EGAF00001714422 bam 255.5 kB
EGAF00001714423 bam 123.0 kB
EGAF00001714424 bam 126.0 kB
EGAF00001714425 bam 220.6 kB
EGAF00001714426 bam 116.9 kB
EGAF00001714427 bam 168.4 kB
EGAF00001714428 bam 161.7 kB
EGAF00001714429 bam 177.6 kB
EGAF00001714430 bam 200.1 kB
EGAF00001714431 bam 126.2 kB
EGAF00001714432 bam 134.0 kB
EGAF00001714433 bam 253.4 kB
EGAF00001714434 bam 128.3 kB
EGAF00001714435 bam 207.0 kB
EGAF00001714436 bam 167.9 kB
EGAF00001714437 bam 269.5 kB
EGAF00001714438 bam 211.2 kB
EGAF00001714439 bam 130.5 kB
EGAF00001714440 bam 109.6 kB
EGAF00001714441 bam 269.5 kB
EGAF00001714442 bam 158.2 kB
EGAF00001714443 bam 137.7 kB
EGAF00001714444 bam 203.2 kB
EGAF00001714445 bam 92.7 kB
EGAF00001714446 bam 132.8 kB
EGAF00001714447 bam 135.6 kB
EGAF00001714448 bam 96.0 kB
EGAF00001714449 bam 145.8 kB
EGAF00001714450 bam 177.1 kB
EGAF00001714451 bam 159.7 kB
EGAF00001714452 bam 196.4 kB
EGAF00001714453 bam 244.9 kB
EGAF00001714454 bam 135.2 kB
EGAF00001714455 bam 122.7 kB
EGAF00001714456 bam 147.3 kB
EGAF00001714457 bam 160.2 kB
EGAF00001714458 bam 217.3 kB
EGAF00001714459 bam 196.0 kB
EGAF00001714460 bam 170.8 kB
EGAF00001714461 bam 233.0 kB
EGAF00001714462 bam 102.4 kB
EGAF00001714463 bam 70.7 kB
EGAF00001714464 bam 142.6 kB
EGAF00001714465 bam 146.2 kB
EGAF00001714466 bam 135.9 kB
EGAF00001714467 bam 251.1 kB
EGAF00001714468 bam 189.8 kB
EGAF00001714469 bam 168.0 kB
EGAF00001714470 bam 126.2 kB
EGAF00001714471 bam 166.5 kB
EGAF00001714472 bam 233.5 kB
EGAF00001714473 bam 114.7 kB
EGAF00001714474 bam 139.0 kB
EGAF00001714475 bam 122.8 kB
EGAF00001714476 bam 182.9 kB
EGAF00001714477 bam 223.3 kB
EGAF00001714478 bam 164.1 kB
EGAF00001714479 bam 213.0 kB
EGAF00001714481 bam 188.6 kB
EGAF00001714482 bam 143.8 kB
EGAF00001714483 bam 152.1 kB
EGAF00001714484 bam 222.2 kB
EGAF00001714485 bam 144.5 kB
EGAF00001714486 bam 234.4 kB
EGAF00001714487 bam 133.2 kB
EGAF00001714488 bam 123.0 kB
EGAF00001714489 bam 132.1 kB
EGAF00001714490 bam 189.6 kB
EGAF00001714491 bam 242.1 kB
EGAF00001714492 bam 174.0 kB
EGAF00001714493 bam 209.9 kB
EGAF00001714494 bam 163.0 kB
EGAF00001714495 bam 169.3 kB
EGAF00001714496 bam 153.0 kB
EGAF00001714497 bam 136.5 kB
EGAF00001714498 bam 132.3 kB
EGAF00001714499 bam 117.1 kB
EGAF00001714500 bam 124.6 kB
EGAF00001714501 bam 131.0 kB
EGAF00001714502 bam 123.8 kB
EGAF00001714503 bam 259.2 kB
EGAF00001714504 bam 137.8 kB
EGAF00001714505 bam 102.9 kB
EGAF00001714506 bam 167.3 kB
EGAF00001714507 bam 125.9 kB
EGAF00001714508 bam 244.2 kB
EGAF00001714509 bam 304.7 kB
EGAF00001714510 bam 128.9 kB
EGAF00001714511 bam 184.6 kB
EGAF00001714512 bam 112.8 kB
EGAF00001714513 bam 136.7 kB
EGAF00001714514 bam 133.6 kB
EGAF00001714515 bam 143.7 kB
EGAF00001714516 bam 148.2 kB
EGAF00001714517 bam 180.3 kB
EGAF00001714518 bam 173.8 kB
EGAF00001714519 bam 250.3 kB
EGAF00001714520 bam 226.1 kB
EGAF00001714521 bam 234.5 kB
EGAF00001714522 bam 177.6 kB
EGAF00001714523 bam 218.2 kB
EGAF00001714524 bam 193.8 kB
EGAF00001714525 bam 155.4 kB
EGAF00001714526 bam 144.6 kB
EGAF00001714527 bam 192.0 kB
EGAF00001714528 bam 120.8 kB
EGAF00001714529 bam 214.7 kB
EGAF00001714530 bam 184.6 kB
EGAF00001714531 bam 132.2 kB
EGAF00001714532 bam 208.4 kB
EGAF00001714533 bam 117.5 kB
EGAF00001714534 bam 87.4 kB
EGAF00001714535 bam 183.3 kB
EGAF00001714536 bam 165.5 kB
EGAF00001714537 bam 101.6 kB
EGAF00001714538 bam 145.6 kB
EGAF00001714539 bam 230.8 kB
EGAF00001714540 bam 114.1 kB
EGAF00001714541 bam 256.1 kB
EGAF00001714542 bam 128.4 kB
EGAF00001714543 bam 120.2 kB
EGAF00001714545 bam 201.5 kB
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EGAF00001714551 bam 212.2 kB
EGAF00001714552 bam 210.2 kB
EGAF00001714553 bam 269.1 kB
EGAF00001714554 bam 133.3 kB
EGAF00001714555 bam 151.6 kB
EGAF00001714556 bam 196.3 kB
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EGAF00001714558 bam 220.0 kB
EGAF00001714559 bam 122.2 kB
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EGAF00001714561 bam 118.7 kB
EGAF00001714562 bam 161.3 kB
EGAF00001714563 bam 167.4 kB
EGAF00001714564 bam 260.6 kB
EGAF00001714565 bam 165.5 kB
EGAF00001714566 bam 182.2 kB
EGAF00001714567 bam 282.7 kB
EGAF00001714568 bam 176.5 kB
EGAF00001714569 bam 124.9 kB
EGAF00001714570 bam 180.3 kB
EGAF00001714571 bam 203.6 kB
EGAF00001714572 bam 117.0 kB
EGAF00001714573 bam 122.8 kB
EGAF00001714574 bam 179.4 kB
EGAF00001714575 bam 175.1 kB
EGAF00001714576 bam 168.4 kB
EGAF00001714577 bam 108.9 kB
EGAF00001714578 bam 166.7 kB
EGAF00001714579 bam 51.1 kB
EGAF00001714580 bam 194.8 kB
EGAF00001714581 bam 157.9 kB
EGAF00001714582 bam 123.5 kB
EGAF00001714583 bam 160.3 kB
EGAF00001714584 bam 193.3 kB
EGAF00001714585 bam 217.5 kB
EGAF00001714586 bam 176.3 kB
EGAF00001714587 bam 201.0 kB
EGAF00001714588 bam 99.7 kB
EGAF00001714589 bam 136.9 kB
EGAF00001714590 bam 203.9 kB
EGAF00001714591 bam 119.8 kB
EGAF00001714592 bam 188.0 kB
EGAF00001714593 bam 141.7 kB
EGAF00001714594 bam 251.0 kB
EGAF00001714595 bam 115.8 kB
EGAF00001714596 bam 219.1 kB
EGAF00001714597 bam 173.3 kB
EGAF00001714598 bam 105.5 kB
EGAF00001714599 bam 141.8 kB
EGAF00001714600 bam 179.2 kB
EGAF00001714601 bam 118.1 kB
EGAF00001714602 bam 222.4 kB
EGAF00001714603 bam 136.5 kB
EGAF00001714604 bam 240.2 kB
EGAF00001714715 bam 162.6 kB
EGAF00001714716 bam 215.4 kB
EGAF00001714717 bam 97.9 kB
EGAF00001714718 bam 256.2 kB
EGAF00001714719 bam 116.3 kB
EGAF00001714720 bam 120.0 kB
EGAF00001714721 bam 234.4 kB
EGAF00001714722 bam 154.2 kB
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EGAF00001714725 bam 157.1 kB
EGAF00001714726 bam 144.5 kB
EGAF00001714727 bam 215.0 kB
EGAF00001714728 bam 201.1 kB
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EGAF00001714732 bam 113.4 kB
EGAF00001714733 bam 149.7 kB
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EGAF00001714738 bam 187.5 kB
EGAF00001714739 bam 177.5 kB
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EGAF00001714743 bam 143.6 kB
EGAF00001714744 bam 232.1 kB
EGAF00001714745 bam 171.2 kB
EGAF00001714746 bam 184.0 kB
EGAF00001714747 bam 143.4 kB
EGAF00001714748 bam 138.7 kB
EGAF00001714749 bam 269.1 kB
EGAF00001714750 bam 162.3 kB
EGAF00001714751 bam 168.3 kB
EGAF00001714752 bam 228.8 kB
EGAF00001714753 bam 154.9 kB
EGAF00001714754 bam 145.4 kB
EGAF00001714755 bam 168.6 kB
EGAF00001714756 bam 322.0 kB
EGAF00001714757 bam 222.8 kB
EGAF00001714758 bam 113.8 kB
EGAF00001714759 bam 192.7 kB
EGAF00001714760 bam 208.4 kB
EGAF00001714761 bam 166.0 kB
EGAF00001714762 bam 156.6 kB
EGAF00001714763 bam 189.0 kB
EGAF00001714764 bam 137.8 kB
EGAF00001714765 bam 145.5 kB
EGAF00001714766 bam 218.0 kB
EGAF00001714767 bam 197.0 kB
EGAF00001714768 bam 132.5 kB
EGAF00001714769 bam 115.2 kB
EGAF00001714770 bam 228.1 kB
EGAF00001714771 bam 182.7 kB
EGAF00001714772 bam 208.9 kB
EGAF00001714773 bam 202.7 kB
EGAF00001714774 bam 192.0 kB
EGAF00001714775 bam 236.5 kB
EGAF00001714776 bam 207.9 kB
EGAF00001714777 bam 167.5 kB
EGAF00001714778 bam 160.6 kB
EGAF00001714779 bam 174.2 kB
EGAF00001714780 bam 224.0 kB
EGAF00001714781 bam 215.2 kB
EGAF00001714782 bam 109.7 kB
EGAF00001714783 bam 167.8 kB
EGAF00001714784 bam 167.5 kB
EGAF00001714785 bam 96.4 kB
EGAF00001714786 bam 126.8 kB
EGAF00001714787 bam 130.0 kB
EGAF00001714788 bam 117.3 kB
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EGAF00001714790 bam 139.9 kB
EGAF00001714791 bam 157.4 kB
EGAF00001714792 bam 176.5 kB
EGAF00001714793 bam 214.3 kB
EGAF00001714794 bam 198.9 kB
EGAF00001714795 bam 269.1 kB
EGAF00001714796 bam 118.2 kB
EGAF00001714797 bam 176.4 kB
EGAF00001714798 bam 153.1 kB
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EGAF00001714800 bam 145.6 kB
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EGAF00001714814 bam 194.8 kB
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EGAF00001714825 bam 186.7 kB
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2977 Files (490.2 MB)