ICGC PCAWG Dataset: OV-AU_PCAWG_RNA-Seq_TopHat2
ICGC PCAWG Dataset for RNA-Seq BAM aligned using TopHat2. Project: OV-AU.
- 18/09/2017
- 93 samples
- DAC: EGAC00001000010
- HMB DUO:0000006 (version: 2021-02-23)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
- NPUNCU DUO:0000018 (version: 2021-02-23)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
- PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
- GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.
ICGC Data Access
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001001692 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00001683709 | bam | 16.0 GB | ||
| EGAF00001683710 | bai | 3.8 MB | ||
| EGAF00001683711 | xml.gz | 3.5 kB | ||
| EGAF00001683712 | bam | 15.4 GB | ||
| EGAF00001683713 | bai | 4.1 MB | ||
| EGAF00001683714 | xml.gz | 3.8 kB | ||
| EGAF00001683715 | bam | 14.0 GB | ||
| EGAF00001683716 | bai | 4.1 MB | ||
| EGAF00001683717 | xml.gz | 3.5 kB | ||
| EGAF00001683718 | bam | 16.0 GB | ||
| EGAF00001683719 | bai | 4.6 MB | ||
| EGAF00001683720 | xml.gz | 3.5 kB | ||
| EGAF00001683721 | bam | 17.8 GB | ||
| EGAF00001683722 | bai | 4.2 MB | ||
| EGAF00001683723 | xml.gz | 3.5 kB | ||
| EGAF00001683724 | bam | 15.4 GB | ||
| EGAF00001683725 | bai | 4.2 MB | ||
| EGAF00001683726 | xml.gz | 3.7 kB | ||
| EGAF00001683727 | bam | 19.2 GB | ||
| EGAF00001683728 | bai | 4.7 MB | ||
| EGAF00001683729 | xml.gz | 3.8 kB | ||
| EGAF00001683730 | bam | 18.8 GB | ||
| EGAF00001683731 | bai | 4.8 MB | ||
| EGAF00001683732 | xml.gz | 3.6 kB | ||
| EGAF00001683733 | bam | 16.0 GB | ||
| EGAF00001683734 | bai | 4.2 MB | ||
| EGAF00001683735 | xml.gz | 3.7 kB | ||
| EGAF00001683736 | bam | 24.1 GB | ||
| EGAF00001683737 | bai | 5.1 MB | ||
| EGAF00001683738 | xml.gz | 3.6 kB | ||
| EGAF00001683739 | bam | 27.9 GB | ||
| EGAF00001683740 | bai | 5.1 MB | ||
| EGAF00001683741 | xml.gz | 3.7 kB | ||
| EGAF00001683742 | bam | 18.8 GB | ||
| EGAF00001683743 | bai | 4.4 MB | ||
| EGAF00001683744 | xml.gz | 3.6 kB | ||
| EGAF00001683745 | bam | 17.1 GB | ||
| EGAF00001683746 | bai | 4.2 MB | ||
| EGAF00001683747 | xml.gz | 3.7 kB | ||
| EGAF00001683748 | bam | 18.1 GB | ||
| EGAF00001683749 | bai | 4.0 MB | ||
| EGAF00001683750 | xml.gz | 3.6 kB | ||
| EGAF00001683751 | bam | 10.8 GB | ||
| EGAF00001683752 | bai | 3.7 MB | ||
| EGAF00001683753 | xml.gz | 3.6 kB | ||
| EGAF00001683754 | bam | 17.6 GB | ||
| EGAF00001683755 | bai | 3.8 MB | ||
| EGAF00001683756 | xml.gz | 3.5 kB | ||
| EGAF00001683757 | bam | 18.7 GB | ||
| EGAF00001683758 | bai | 4.0 MB | ||
| EGAF00001683759 | xml.gz | 3.5 kB | ||
| EGAF00001683760 | bam | 17.7 GB | ||
| EGAF00001683761 | bai | 4.3 MB | ||
| EGAF00001683762 | xml.gz | 3.5 kB | ||
| EGAF00001683763 | bam | 12.9 GB | ||
| EGAF00001683764 | bai | 3.1 MB | ||
| EGAF00001683765 | xml.gz | 3.6 kB | ||
| EGAF00001683766 | bam | 19.2 GB | ||
| EGAF00001683767 | bai | 4.7 MB | ||
| EGAF00001683768 | xml.gz | 3.6 kB | ||
| EGAF00001683769 | bam | 15.7 GB | ||
| EGAF00001683770 | bai | 4.2 MB | ||
| EGAF00001683771 | xml.gz | 3.6 kB | ||
| EGAF00001683772 | bam | 12.8 GB | ||
| EGAF00001683773 | bai | 4.0 MB | ||
| EGAF00001683774 | xml.gz | 3.6 kB | ||
| EGAF00001683775 | bam | 19.7 GB | ||
| EGAF00001683776 | bai | 4.0 MB | ||
| EGAF00001683777 | xml.gz | 3.5 kB | ||
| EGAF00001683778 | bam | 13.6 GB | ||
| EGAF00001683779 | bai | 3.9 MB | ||
| EGAF00001683780 | xml.gz | 3.4 kB | ||
| EGAF00001683781 | bam | 17.6 GB | ||
| EGAF00001683782 | bai | 4.4 MB | ||
| EGAF00001683783 | xml.gz | 3.6 kB | ||
| EGAF00001683784 | bam | 20.9 GB | ||
| EGAF00001683785 | bai | 4.4 MB | ||
| EGAF00001683786 | xml.gz | 3.5 kB | ||
| EGAF00001683787 | bam | 17.5 GB | ||
| EGAF00001683788 | bai | 3.9 MB | ||
| EGAF00001683789 | xml.gz | 3.5 kB | ||
| EGAF00001683790 | bam | 19.9 GB | ||
| EGAF00001683791 | bai | 4.3 MB | ||
| EGAF00001683792 | xml.gz | 3.5 kB | ||
| EGAF00001683793 | bam | 16.1 GB | ||
| EGAF00001683794 | bai | 4.4 MB | ||
| EGAF00001683795 | xml.gz | 3.6 kB | ||
| EGAF00001683796 | bam | 17.7 GB | ||
| EGAF00001683797 | bai | 3.8 MB | ||
| EGAF00001683798 | xml.gz | 3.5 kB | ||
| EGAF00001683799 | bam | 14.6 GB | ||
| EGAF00001683800 | bai | 3.9 MB | ||
| EGAF00001683801 | xml.gz | 3.6 kB | ||
| EGAF00001683802 | bam | 17.6 GB | ||
| EGAF00001683803 | bai | 4.0 MB | ||
| EGAF00001683804 | xml.gz | 3.5 kB | ||
| EGAF00001683805 | bam | 16.5 GB | ||
| EGAF00001683806 | bai | 3.9 MB | ||
| EGAF00001683807 | xml.gz | 3.6 kB | ||
| EGAF00001683808 | bam | 21.7 GB | ||
| EGAF00001683809 | bai | 4.9 MB | ||
| EGAF00001683810 | xml.gz | 3.5 kB | ||
| EGAF00001683811 | bam | 14.8 GB | ||
| EGAF00001683812 | bai | 4.4 MB | ||
| EGAF00001683813 | xml.gz | 3.6 kB | ||
| EGAF00001683814 | bam | 18.4 GB | ||
| EGAF00001683815 | bai | 5.0 MB | ||
| EGAF00001683816 | xml.gz | 3.5 kB | ||
| EGAF00001683817 | bam | 19.4 GB | ||
| EGAF00001683818 | bai | 4.5 MB | ||
| EGAF00001683819 | xml.gz | 3.6 kB | ||
| EGAF00001683820 | bam | 21.8 GB | ||
| EGAF00001683821 | bai | 4.4 MB | ||
| EGAF00001683822 | xml.gz | 3.5 kB | ||
| EGAF00001683823 | bam | 19.6 GB | ||
| EGAF00001683824 | bai | 3.7 MB | ||
| EGAF00001683825 | xml.gz | 3.5 kB | ||
| EGAF00001683826 | bam | 10.5 GB | ||
| EGAF00001683827 | bai | 3.9 MB | ||
| EGAF00001683828 | xml.gz | 3.5 kB | ||
| EGAF00001683829 | bam | 15.8 GB | ||
| EGAF00001683830 | bai | 4.3 MB | ||
| EGAF00001683831 | xml.gz | 3.6 kB | ||
| EGAF00001683832 | bam | 13.9 GB | ||
| EGAF00001683833 | bai | 4.5 MB | ||
| EGAF00001683834 | xml.gz | 3.6 kB | ||
| EGAF00001683835 | bam | 17.5 GB | ||
| EGAF00001683836 | bai | 4.0 MB | ||
| EGAF00001683837 | xml.gz | 3.6 kB | ||
| EGAF00001683838 | bam | 15.9 GB | ||
| EGAF00001683839 | bai | 4.3 MB | ||
| EGAF00001683840 | xml.gz | 3.6 kB | ||
| EGAF00001683841 | bam | 19.1 GB | ||
| EGAF00001683842 | bai | 4.8 MB | ||
| EGAF00001683843 | xml.gz | 3.6 kB | ||
| EGAF00001683844 | bam | 18.3 GB | ||
| EGAF00001683845 | bai | 4.8 MB | ||
| EGAF00001683846 | xml.gz | 3.5 kB | ||
| EGAF00001683847 | bam | 18.2 GB | ||
| EGAF00001683848 | bai | 5.1 MB | ||
| EGAF00001683849 | xml.gz | 3.4 kB | ||
| EGAF00001683850 | bam | 15.6 GB | ||
| EGAF00001683851 | bai | 4.0 MB | ||
| EGAF00001683852 | xml.gz | 3.5 kB | ||
| EGAF00001683853 | bam | 18.0 GB | ||
| EGAF00001683854 | bai | 4.0 MB | ||
| EGAF00001683855 | xml.gz | 3.6 kB | ||
| EGAF00001683856 | bam | 23.2 GB | ||
| EGAF00001683857 | bai | 5.2 MB | ||
| EGAF00001683858 | xml.gz | 3.5 kB | ||
| EGAF00001683859 | bam | 11.7 GB | ||
| EGAF00001683860 | bai | 4.1 MB | ||
| EGAF00001683861 | xml.gz | 3.5 kB | ||
| EGAF00001683862 | bam | 17.7 GB | ||
| EGAF00001683863 | bai | 3.6 MB | ||
| EGAF00001683864 | xml.gz | 3.5 kB | ||
| EGAF00001683865 | bam | 15.8 GB | ||
| EGAF00001683866 | bai | 4.6 MB | ||
| EGAF00001683867 | xml.gz | 3.6 kB | ||
| EGAF00001683868 | bam | 20.2 GB | ||
| EGAF00001683869 | bai | 4.8 MB | ||
| EGAF00001683870 | xml.gz | 3.6 kB | ||
| EGAF00001683871 | bam | 20.1 GB | ||
| EGAF00001683872 | bai | 4.8 MB | ||
| EGAF00001683873 | xml.gz | 3.6 kB | ||
| EGAF00001683874 | bam | 16.3 GB | ||
| EGAF00001683875 | bai | 3.9 MB | ||
| EGAF00001683876 | xml.gz | 3.6 kB | ||
| EGAF00001683877 | bam | 17.6 GB | ||
| EGAF00001683878 | bai | 4.4 MB | ||
| EGAF00001683879 | xml.gz | 3.5 kB | ||
| EGAF00001683880 | bam | 21.0 GB | ||
| EGAF00001683881 | bai | 5.1 MB | ||
| EGAF00001683882 | xml.gz | 3.5 kB | ||
| EGAF00001683883 | bam | 20.2 GB | ||
| EGAF00001683884 | bai | 4.6 MB | ||
| EGAF00001683885 | xml.gz | 3.6 kB | ||
| EGAF00001683886 | bam | 17.3 GB | ||
| EGAF00001683887 | bai | 3.9 MB | ||
| EGAF00001683888 | xml.gz | 3.5 kB | ||
| EGAF00001683889 | bam | 19.4 GB | ||
| EGAF00001683890 | bai | 4.7 MB | ||
| EGAF00001683891 | xml.gz | 3.5 kB | ||
| EGAF00001683892 | bam | 10.0 GB | ||
| EGAF00001683893 | bai | 3.6 MB | ||
| EGAF00001683894 | xml.gz | 3.4 kB | ||
| EGAF00001683895 | bam | 18.1 GB | ||
| EGAF00001683896 | bai | 3.6 MB | ||
| EGAF00001683897 | xml.gz | 3.5 kB | ||
| EGAF00001683898 | bam | 18.1 GB | ||
| EGAF00001683899 | bai | 4.0 MB | ||
| EGAF00001683900 | xml.gz | 3.5 kB | ||
| EGAF00001683901 | bam | 16.1 GB | ||
| EGAF00001683902 | bai | 4.5 MB | ||
| EGAF00001683903 | xml.gz | 3.5 kB | ||
| EGAF00001683904 | bam | 20.7 GB | ||
| EGAF00001683905 | bai | 4.9 MB | ||
| EGAF00001683906 | xml.gz | 3.6 kB | ||
| EGAF00001683907 | bam | 16.1 GB | ||
| EGAF00001683908 | bai | 4.3 MB | ||
| EGAF00001683909 | xml.gz | 3.6 kB | ||
| EGAF00001683910 | bam | 19.3 GB | ||
| EGAF00001683911 | bai | 4.7 MB | ||
| EGAF00001683912 | xml.gz | 3.5 kB | ||
| EGAF00001683913 | bam | 20.5 GB | ||
| EGAF00001683914 | bai | 4.3 MB | ||
| EGAF00001683915 | xml.gz | 3.6 kB | ||
| EGAF00001683916 | bam | 15.0 GB | ||
| EGAF00001683917 | bai | 4.1 MB | ||
| EGAF00001683918 | xml.gz | 3.6 kB | ||
| EGAF00001683919 | bam | 15.9 GB | ||
| EGAF00001683920 | bai | 3.8 MB | ||
| EGAF00001683921 | xml.gz | 3.6 kB | ||
| EGAF00001683922 | bam | 13.7 GB | ||
| EGAF00001683923 | bai | 4.1 MB | ||
| EGAF00001683924 | xml.gz | 3.6 kB | ||
| EGAF00001683925 | bam | 17.3 GB | ||
| EGAF00001683926 | bai | 4.0 MB | ||
| EGAF00001683927 | xml.gz | 3.5 kB | ||
| EGAF00001683928 | bam | 18.6 GB | ||
| EGAF00001683929 | bai | 4.2 MB | ||
| EGAF00001683930 | xml.gz | 3.5 kB | ||
| EGAF00001683931 | bam | 17.8 GB | ||
| EGAF00001683932 | bai | 4.4 MB | ||
| EGAF00001683933 | xml.gz | 3.5 kB | ||
| EGAF00001683934 | bam | 13.7 GB | ||
| EGAF00001683935 | bai | 3.8 MB | ||
| EGAF00001683936 | xml.gz | 3.5 kB | ||
| EGAF00001683937 | bam | 11.3 GB | ||
| EGAF00001683938 | bai | 3.9 MB | ||
| EGAF00001683939 | xml.gz | 3.5 kB | ||
| EGAF00001683940 | bam | 16.5 GB | ||
| EGAF00001683941 | bai | 4.9 MB | ||
| EGAF00001683942 | xml.gz | 3.5 kB | ||
| EGAF00001683943 | bam | 112.5 GB | ||
| EGAF00001683944 | bai | 4.3 MB | ||
| EGAF00001683945 | xml.gz | 3.5 kB | ||
| EGAF00001683946 | bam | 16.2 GB | ||
| EGAF00001683947 | bai | 4.6 MB | ||
| EGAF00001683948 | xml.gz | 3.6 kB | ||
| EGAF00001683949 | bam | 15.2 GB | ||
| EGAF00001683950 | bai | 4.3 MB | ||
| EGAF00001683951 | xml.gz | 3.5 kB | ||
| EGAF00001683952 | bam | 18.4 GB | ||
| EGAF00001683953 | bai | 4.7 MB | ||
| EGAF00001683954 | xml.gz | 3.6 kB | ||
| EGAF00001683955 | bam | 18.6 GB | ||
| EGAF00001683956 | bai | 4.3 MB | ||
| EGAF00001683957 | xml.gz | 3.5 kB | ||
| EGAF00001683958 | bam | 20.1 GB | ||
| EGAF00001683959 | bai | 4.6 MB | ||
| EGAF00001683960 | xml.gz | 3.6 kB | ||
| EGAF00001683961 | bam | 17.5 GB | ||
| EGAF00001683962 | bai | 4.4 MB | ||
| EGAF00001683963 | xml.gz | 3.5 kB | ||
| EGAF00001683964 | bam | 14.6 GB | ||
| EGAF00001683965 | bai | 4.0 MB | ||
| EGAF00001683966 | xml.gz | 3.5 kB | ||
| EGAF00001683967 | bam | 21.6 GB | ||
| EGAF00001683968 | bai | 4.5 MB | ||
| EGAF00001683969 | xml.gz | 3.6 kB | ||
| EGAF00001683970 | bam | 12.4 GB | ||
| EGAF00001683971 | bai | 3.7 MB | ||
| EGAF00001683972 | xml.gz | 3.5 kB | ||
| EGAF00001683973 | bam | 17.6 GB | ||
| EGAF00001683974 | bai | 3.8 MB | ||
| EGAF00001683975 | xml.gz | 3.5 kB | ||
| EGAF00001683976 | bam | 16.8 GB | ||
| EGAF00001683977 | bai | 4.5 MB | ||
| EGAF00001683978 | xml.gz | 3.5 kB | ||
| EGAF00001683979 | bam | 16.3 GB | ||
| EGAF00001683980 | bai | 4.0 MB | ||
| EGAF00001683981 | xml.gz | 3.5 kB | ||
| EGAF00001683982 | bam | 15.7 GB | ||
| EGAF00001683983 | bai | 4.1 MB | ||
| EGAF00001683984 | xml.gz | 3.6 kB | ||
| EGAF00001683985 | bam | 16.6 GB | ||
| EGAF00001683986 | bai | 4.2 MB | ||
| EGAF00001683987 | xml.gz | 3.5 kB | ||
| 279 Files (1.7 TB) | ||||