CNV detection in targeted NGS panel data
We present targeted NGS panel data from 170 samples that were processed using the TruSightTM Cancer (TSC) panel (Illumina, San Diego, CA, USA), which targets 94 genes and 284 SNPs associated with a predisposition towards cancer. The samples are enriched for CNVs in the genes of interest. All CNVs have previously been assessed with MLPA and can therefore be considered as confirmed.
- 12/07/2017
- 170 samples
- DAC: EGAC00001000669
- Technology: Illumina MiSeq
Data Access Agreement of JKU and MUI for study EGAS00001002481: CNV detection in targeted NGS panel data
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
Study ID | Study Title | Study Type |
---|---|---|
EGAS00001002481 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
ID | File Type | Size | Located in | |
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EGAF00001676792 | fastq.gz | 140.1 MB | ||
EGAF00001676793 | fastq.gz | 149.5 MB | ||
EGAF00001676794 | fastq.gz | 165.6 MB | ||
EGAF00001676795 | fastq.gz | 176.2 MB | ||
EGAF00001676796 | fastq.gz | 144.1 MB | ||
EGAF00001676797 | fastq.gz | 150.7 MB | ||
EGAF00001676798 | fastq.gz | 148.4 MB | ||
EGAF00001676799 | fastq.gz | 156.5 MB | ||
EGAF00001676800 | fastq.gz | 157.8 MB | ||
EGAF00001676801 | fastq.gz | 166.6 MB | ||
EGAF00001676802 | fastq.gz | 191.6 MB | ||
EGAF00001676803 | fastq.gz | 211.5 MB | ||
EGAF00001676804 | fastq.gz | 187.1 MB | ||
EGAF00001676805 | fastq.gz | 190.9 MB | ||
EGAF00001676806 | fastq.gz | 164.6 MB | ||
EGAF00001676807 | fastq.gz | 172.8 MB | ||
EGAF00001676808 | fastq.gz | 164.3 MB | ||
EGAF00001676809 | fastq.gz | 179.9 MB | ||
EGAF00001676810 | fastq.gz | 161.1 MB | ||
EGAF00001676811 | fastq.gz | 168.8 MB | ||
EGAF00001676812 | fastq.gz | 176.4 MB | ||
EGAF00001676813 | fastq.gz | 191.7 MB | ||
EGAF00001676814 | fastq.gz | 164.8 MB | ||
EGAF00001676815 | fastq.gz | 178.0 MB | ||
EGAF00001676816 | fastq.gz | 148.1 MB | ||
EGAF00001676817 | fastq.gz | 164.5 MB | ||
EGAF00001676818 | fastq.gz | 157.5 MB | ||
EGAF00001676819 | fastq.gz | 169.1 MB | ||
EGAF00001676820 | fastq.gz | 174.4 MB | ||
EGAF00001676821 | fastq.gz | 193.7 MB | ||
EGAF00001676822 | fastq.gz | 190.4 MB | ||
EGAF00001676823 | fastq.gz | 194.3 MB | ||
EGAF00001676824 | fastq.gz | 161.7 MB | ||
EGAF00001676825 | fastq.gz | 167.5 MB | ||
EGAF00001676826 | fastq.gz | 149.2 MB | ||
EGAF00001676827 | fastq.gz | 162.5 MB | ||
EGAF00001676828 | fastq.gz | 171.7 MB | ||
EGAF00001676829 | fastq.gz | 188.2 MB | ||
EGAF00001676830 | fastq.gz | 184.0 MB | ||
EGAF00001676831 | fastq.gz | 199.8 MB | ||
EGAF00001676832 | fastq.gz | 215.9 MB | ||
EGAF00001676833 | fastq.gz | 225.1 MB | ||
EGAF00001676834 | fastq.gz | 179.4 MB | ||
EGAF00001676835 | fastq.gz | 182.2 MB | ||
EGAF00001676836 | fastq.gz | 203.0 MB | ||
EGAF00001676837 | fastq.gz | 207.6 MB | ||
EGAF00001676838 | fastq.gz | 210.1 MB | ||
EGAF00001676839 | fastq.gz | 205.8 MB | ||
EGAF00001676840 | fastq.gz | 167.6 MB | ||
EGAF00001676841 | fastq.gz | 177.9 MB | ||
EGAF00001676842 | fastq.gz | 165.6 MB | ||
EGAF00001676843 | fastq.gz | 157.6 MB | ||
EGAF00001676844 | fastq.gz | 218.9 MB | ||
EGAF00001676845 | fastq.gz | 220.7 MB | ||
EGAF00001676846 | fastq.gz | 146.3 MB | ||
EGAF00001676847 | fastq.gz | 162.7 MB | ||
EGAF00001676848 | fastq.gz | 177.8 MB | ||
EGAF00001676849 | fastq.gz | 184.9 MB | ||
EGAF00001676850 | fastq.gz | 173.1 MB | ||
EGAF00001676851 | fastq.gz | 190.3 MB | ||
EGAF00001676852 | fastq.gz | 168.3 MB | ||
EGAF00001676853 | fastq.gz | 180.0 MB | ||
EGAF00001676854 | fastq.gz | 207.6 MB | ||
EGAF00001676855 | fastq.gz | 211.0 MB | ||
EGAF00001676856 | fastq.gz | 185.2 MB | ||
EGAF00001676857 | fastq.gz | 184.1 MB | ||
EGAF00001676858 | fastq.gz | 178.0 MB | ||
EGAF00001676859 | fastq.gz | 186.8 MB | ||
EGAF00001676860 | fastq.gz | 197.2 MB | ||
EGAF00001676861 | fastq.gz | 204.7 MB | ||
EGAF00001676862 | fastq.gz | 237.0 MB | ||
EGAF00001676863 | fastq.gz | 246.3 MB | ||
EGAF00001676864 | fastq.gz | 196.4 MB | ||
EGAF00001676865 | fastq.gz | 206.3 MB | ||
EGAF00001676866 | fastq.gz | 181.8 MB | ||
EGAF00001676867 | fastq.gz | 200.3 MB | ||
EGAF00001676868 | fastq.gz | 149.9 MB | ||
EGAF00001676869 | fastq.gz | 166.9 MB | ||
EGAF00001676870 | fastq.gz | 177.3 MB | ||
EGAF00001676871 | fastq.gz | 185.6 MB | ||
EGAF00001676872 | fastq.gz | 210.3 MB | ||
EGAF00001676873 | fastq.gz | 214.5 MB | ||
EGAF00001676874 | fastq.gz | 140.0 MB | ||
EGAF00001676875 | fastq.gz | 150.7 MB | ||
EGAF00001676876 | fastq.gz | 182.6 MB | ||
EGAF00001676877 | fastq.gz | 191.8 MB | ||
EGAF00001676878 | fastq.gz | 187.0 MB | ||
EGAF00001676879 | fastq.gz | 198.4 MB | ||
EGAF00001676880 | fastq.gz | 193.9 MB | ||
EGAF00001676881 | fastq.gz | 203.7 MB | ||
EGAF00001676882 | fastq.gz | 77.1 MB | ||
EGAF00001676883 | fastq.gz | 78.9 MB | ||
EGAF00001676884 | fastq.gz | 224.5 MB | ||
EGAF00001676885 | fastq.gz | 246.5 MB | ||
EGAF00001676886 | fastq.gz | 215.5 MB | ||
EGAF00001676887 | fastq.gz | 227.2 MB | ||
EGAF00001676888 | fastq.gz | 181.3 MB | ||
EGAF00001676889 | fastq.gz | 187.5 MB | ||
EGAF00001676890 | fastq.gz | 100.0 MB | ||
EGAF00001676891 | fastq.gz | 107.6 MB | ||
EGAF00001676892 | fastq.gz | 141.9 MB | ||
EGAF00001676893 | fastq.gz | 151.8 MB | ||
EGAF00001676894 | fastq.gz | 203.4 MB | ||
EGAF00001676895 | fastq.gz | 212.6 MB | ||
EGAF00001676896 | fastq.gz | 189.3 MB | ||
EGAF00001676897 | fastq.gz | 200.1 MB | ||
EGAF00001676898 | fastq.gz | 175.6 MB | ||
EGAF00001676899 | fastq.gz | 183.7 MB | ||
EGAF00001676900 | fastq.gz | 151.5 MB | ||
EGAF00001676901 | fastq.gz | 149.1 MB | ||
EGAF00001676902 | fastq.gz | 93.6 MB | ||
EGAF00001676903 | fastq.gz | 97.6 MB | ||
EGAF00001676904 | fastq.gz | 161.8 MB | ||
EGAF00001676905 | fastq.gz | 173.0 MB | ||
EGAF00001676906 | fastq.gz | 238.0 MB | ||
EGAF00001676907 | fastq.gz | 247.7 MB | ||
EGAF00001676908 | fastq.gz | 80.0 MB | ||
EGAF00001676909 | fastq.gz | 86.1 MB | ||
EGAF00001676910 | fastq.gz | 106.5 MB | ||
EGAF00001676911 | fastq.gz | 110.9 MB | ||
EGAF00001676912 | fastq.gz | 192.9 MB | ||
EGAF00001676913 | fastq.gz | 203.3 MB | ||
EGAF00001676914 | fastq.gz | 213.6 MB | ||
EGAF00001676915 | fastq.gz | 219.7 MB | ||
EGAF00001676916 | fastq.gz | 196.3 MB | ||
EGAF00001676917 | fastq.gz | 207.9 MB | ||
EGAF00001676918 | fastq.gz | 171.8 MB | ||
EGAF00001676919 | fastq.gz | 176.8 MB | ||
EGAF00001676920 | fastq.gz | 170.4 MB | ||
EGAF00001676921 | fastq.gz | 183.8 MB | ||
EGAF00001676922 | fastq.gz | 128.8 MB | ||
EGAF00001676923 | fastq.gz | 141.9 MB | ||
EGAF00001676924 | fastq.gz | 153.0 MB | ||
EGAF00001676925 | fastq.gz | 165.3 MB | ||
EGAF00001676926 | fastq.gz | 147.2 MB | ||
EGAF00001676927 | fastq.gz | 159.2 MB | ||
EGAF00001676928 | fastq.gz | 163.5 MB | ||
EGAF00001676929 | fastq.gz | 185.5 MB | ||
EGAF00001676930 | fastq.gz | 169.4 MB | ||
EGAF00001676931 | fastq.gz | 183.7 MB | ||
EGAF00001676932 | fastq.gz | 208.7 MB | ||
EGAF00001676933 | fastq.gz | 222.2 MB | ||
EGAF00001676934 | fastq.gz | 142.6 MB | ||
EGAF00001676935 | fastq.gz | 151.7 MB | ||
EGAF00001676936 | fastq.gz | 196.2 MB | ||
EGAF00001676937 | fastq.gz | 207.0 MB | ||
EGAF00001676938 | fastq.gz | 206.3 MB | ||
EGAF00001676939 | fastq.gz | 213.2 MB | ||
EGAF00001676940 | fastq.gz | 174.0 MB | ||
EGAF00001676941 | fastq.gz | 181.8 MB | ||
EGAF00001676942 | fastq.gz | 187.8 MB | ||
EGAF00001676943 | fastq.gz | 192.3 MB | ||
EGAF00001676944 | fastq.gz | 102.8 MB | ||
EGAF00001676945 | fastq.gz | 108.0 MB | ||
EGAF00001676946 | fastq.gz | 180.8 MB | ||
EGAF00001676947 | fastq.gz | 192.8 MB | ||
EGAF00001676948 | fastq.gz | 149.2 MB | ||
EGAF00001676949 | fastq.gz | 171.7 MB | ||
EGAF00001676950 | fastq.gz | 185.9 MB | ||
EGAF00001676951 | fastq.gz | 190.9 MB | ||
EGAF00001676952 | fastq.gz | 160.8 MB | ||
EGAF00001676953 | fastq.gz | 171.4 MB | ||
EGAF00001676954 | fastq.gz | 140.6 MB | ||
EGAF00001676955 | fastq.gz | 148.7 MB | ||
EGAF00001676956 | fastq.gz | 230.8 MB | ||
EGAF00001676957 | fastq.gz | 227.6 MB | ||
EGAF00001676958 | fastq.gz | 123.4 MB | ||
EGAF00001676959 | fastq.gz | 136.5 MB | ||
EGAF00001676960 | fastq.gz | 195.5 MB | ||
EGAF00001676961 | fastq.gz | 200.2 MB | ||
EGAF00001676962 | fastq.gz | 163.3 MB | ||
EGAF00001676963 | fastq.gz | 170.0 MB | ||
EGAF00001676964 | fastq.gz | 187.5 MB | ||
EGAF00001676965 | fastq.gz | 201.6 MB | ||
EGAF00001676966 | fastq.gz | 172.1 MB | ||
EGAF00001676967 | fastq.gz | 188.7 MB | ||
EGAF00001676968 | fastq.gz | 181.7 MB | ||
EGAF00001676969 | fastq.gz | 184.1 MB | ||
EGAF00001676970 | fastq.gz | 192.6 MB | ||
EGAF00001676971 | fastq.gz | 202.2 MB | ||
EGAF00001676972 | fastq.gz | 136.7 MB | ||
EGAF00001676973 | fastq.gz | 148.0 MB | ||
EGAF00001676974 | fastq.gz | 175.8 MB | ||
EGAF00001676975 | fastq.gz | 182.2 MB | ||
EGAF00001676976 | fastq.gz | 169.6 MB | ||
EGAF00001676977 | fastq.gz | 179.8 MB | ||
EGAF00001676978 | fastq.gz | 148.5 MB | ||
EGAF00001676979 | fastq.gz | 158.9 MB | ||
EGAF00001676980 | fastq.gz | 176.3 MB | ||
EGAF00001676981 | fastq.gz | 196.7 MB | ||
EGAF00001676982 | fastq.gz | 177.8 MB | ||
EGAF00001676983 | fastq.gz | 193.8 MB | ||
EGAF00001676984 | fastq.gz | 163.5 MB | ||
EGAF00001676985 | fastq.gz | 158.2 MB | ||
EGAF00001676986 | fastq.gz | 121.1 MB | ||
EGAF00001676987 | fastq.gz | 135.1 MB | ||
EGAF00001676988 | fastq.gz | 224.2 MB | ||
EGAF00001676989 | fastq.gz | 232.4 MB | ||
EGAF00001676990 | fastq.gz | 152.0 MB | ||
EGAF00001676991 | fastq.gz | 161.4 MB | ||
EGAF00001676992 | fastq.gz | 177.5 MB | ||
EGAF00001676993 | fastq.gz | 184.9 MB | ||
EGAF00001676994 | fastq.gz | 155.1 MB | ||
EGAF00001676995 | fastq.gz | 160.5 MB | ||
EGAF00001676996 | fastq.gz | 121.5 MB | ||
EGAF00001676997 | fastq.gz | 132.8 MB | ||
EGAF00001676998 | fastq.gz | 185.3 MB | ||
EGAF00001676999 | fastq.gz | 195.6 MB | ||
EGAF00001677000 | fastq.gz | 130.6 MB | ||
EGAF00001677001 | fastq.gz | 133.7 MB | ||
EGAF00001677002 | fastq.gz | 198.4 MB | ||
EGAF00001677003 | fastq.gz | 207.2 MB | ||
EGAF00001677004 | fastq.gz | 136.8 MB | ||
EGAF00001677005 | fastq.gz | 150.6 MB | ||
EGAF00001677006 | fastq.gz | 202.3 MB | ||
EGAF00001677007 | fastq.gz | 210.6 MB | ||
EGAF00001677008 | fastq.gz | 147.6 MB | ||
EGAF00001677009 | fastq.gz | 158.3 MB | ||
EGAF00001677010 | fastq.gz | 142.8 MB | ||
EGAF00001677011 | fastq.gz | 150.6 MB | ||
EGAF00001677012 | fastq.gz | 165.6 MB | ||
EGAF00001677013 | fastq.gz | 186.0 MB | ||
EGAF00001677014 | fastq.gz | 200.9 MB | ||
EGAF00001677015 | fastq.gz | 213.9 MB | ||
EGAF00001677016 | fastq.gz | 161.2 MB | ||
EGAF00001677017 | fastq.gz | 181.6 MB | ||
EGAF00001677018 | fastq.gz | 127.4 MB | ||
EGAF00001677019 | fastq.gz | 140.2 MB | ||
EGAF00001677020 | fastq.gz | 166.6 MB | ||
EGAF00001677021 | fastq.gz | 165.4 MB | ||
EGAF00001677022 | fastq.gz | 217.4 MB | ||
EGAF00001677023 | fastq.gz | 228.8 MB | ||
EGAF00001677024 | fastq.gz | 150.7 MB | ||
EGAF00001677025 | fastq.gz | 158.3 MB | ||
EGAF00001677026 | fastq.gz | 190.5 MB | ||
EGAF00001677027 | fastq.gz | 195.4 MB | ||
EGAF00001677028 | fastq.gz | 173.2 MB | ||
EGAF00001677029 | fastq.gz | 176.3 MB | ||
EGAF00001677030 | fastq.gz | 135.1 MB | ||
EGAF00001677031 | fastq.gz | 146.0 MB | ||
EGAF00001677032 | fastq.gz | 135.7 MB | ||
EGAF00001677033 | fastq.gz | 147.0 MB | ||
EGAF00001677034 | fastq.gz | 194.1 MB | ||
EGAF00001677035 | fastq.gz | 213.3 MB | ||
EGAF00001677036 | fastq.gz | 215.8 MB | ||
EGAF00001677037 | fastq.gz | 229.6 MB | ||
EGAF00001677038 | fastq.gz | 171.8 MB | ||
EGAF00001677039 | fastq.gz | 176.3 MB | ||
EGAF00001677040 | fastq.gz | 167.1 MB | ||
EGAF00001677041 | fastq.gz | 172.8 MB | ||
EGAF00001677042 | fastq.gz | 166.9 MB | ||
EGAF00001677043 | fastq.gz | 191.7 MB | ||
EGAF00001677044 | fastq.gz | 83.5 MB | ||
EGAF00001677045 | fastq.gz | 82.2 MB | ||
EGAF00001677046 | fastq.gz | 164.6 MB | ||
EGAF00001677047 | fastq.gz | 175.9 MB | ||
EGAF00001677048 | fastq.gz | 170.0 MB | ||
EGAF00001677049 | fastq.gz | 176.5 MB | ||
EGAF00001677050 | fastq.gz | 199.8 MB | ||
EGAF00001677051 | fastq.gz | 205.9 MB | ||
EGAF00001677052 | fastq.gz | 108.4 MB | ||
EGAF00001677053 | fastq.gz | 116.9 MB | ||
EGAF00001677054 | fastq.gz | 182.6 MB | ||
EGAF00001677055 | fastq.gz | 201.8 MB | ||
EGAF00001677056 | fastq.gz | 230.8 MB | ||
EGAF00001677057 | fastq.gz | 242.9 MB | ||
EGAF00001677058 | fastq.gz | 186.0 MB | ||
EGAF00001677059 | fastq.gz | 201.4 MB | ||
EGAF00001677060 | fastq.gz | 193.4 MB | ||
EGAF00001677061 | fastq.gz | 203.7 MB | ||
EGAF00001677062 | fastq.gz | 374.0 MB | ||
EGAF00001677063 | fastq.gz | 374.5 MB | ||
EGAF00001677064 | fastq.gz | 153.3 MB | ||
EGAF00001677065 | fastq.gz | 168.8 MB | ||
EGAF00001677066 | fastq.gz | 155.6 MB | ||
EGAF00001677067 | fastq.gz | 162.6 MB | ||
EGAF00001677068 | fastq.gz | 165.4 MB | ||
EGAF00001677069 | fastq.gz | 177.6 MB | ||
EGAF00001677070 | fastq.gz | 184.3 MB | ||
EGAF00001677071 | fastq.gz | 207.6 MB | ||
EGAF00001677072 | fastq.gz | 205.7 MB | ||
EGAF00001677073 | fastq.gz | 217.3 MB | ||
EGAF00001677074 | fastq.gz | 200.7 MB | ||
EGAF00001677075 | fastq.gz | 221.2 MB | ||
EGAF00001677076 | fastq.gz | 187.5 MB | ||
EGAF00001677077 | fastq.gz | 201.1 MB | ||
EGAF00001677078 | fastq.gz | 159.5 MB | ||
EGAF00001677079 | fastq.gz | 169.9 MB | ||
EGAF00001677080 | fastq.gz | 174.5 MB | ||
EGAF00001677081 | fastq.gz | 186.0 MB | ||
EGAF00001677082 | fastq.gz | 165.9 MB | ||
EGAF00001677083 | fastq.gz | 173.5 MB | ||
EGAF00001677084 | fastq.gz | 214.3 MB | ||
EGAF00001677085 | fastq.gz | 216.9 MB | ||
EGAF00001677086 | fastq.gz | 193.3 MB | ||
EGAF00001677087 | fastq.gz | 204.8 MB | ||
EGAF00001677088 | fastq.gz | 186.7 MB | ||
EGAF00001677089 | fastq.gz | 194.1 MB | ||
EGAF00001677090 | fastq.gz | 225.4 MB | ||
EGAF00001677091 | fastq.gz | 238.8 MB | ||
EGAF00001677092 | fastq.gz | 147.9 MB | ||
EGAF00001677093 | fastq.gz | 156.1 MB | ||
EGAF00001677094 | fastq.gz | 197.7 MB | ||
EGAF00001677095 | fastq.gz | 207.4 MB | ||
EGAF00001677096 | fastq.gz | 160.7 MB | ||
EGAF00001677097 | fastq.gz | 168.3 MB | ||
EGAF00001677098 | fastq.gz | 180.5 MB | ||
EGAF00001677099 | fastq.gz | 186.4 MB | ||
EGAF00001677100 | fastq.gz | 195.3 MB | ||
EGAF00001677101 | fastq.gz | 204.8 MB | ||
EGAF00001677102 | fastq.gz | 192.1 MB | ||
EGAF00001677103 | fastq.gz | 207.4 MB | ||
EGAF00001677104 | fastq.gz | 219.0 MB | ||
EGAF00001677105 | fastq.gz | 233.6 MB | ||
EGAF00001677106 | fastq.gz | 200.3 MB | ||
EGAF00001677107 | fastq.gz | 217.2 MB | ||
EGAF00001677108 | fastq.gz | 202.6 MB | ||
EGAF00001677109 | fastq.gz | 213.4 MB | ||
EGAF00001677110 | fastq.gz | 177.5 MB | ||
EGAF00001677111 | fastq.gz | 186.5 MB | ||
EGAF00001677112 | fastq.gz | 144.1 MB | ||
EGAF00001677113 | fastq.gz | 150.3 MB | ||
EGAF00001677114 | fastq.gz | 161.7 MB | ||
EGAF00001677115 | fastq.gz | 170.1 MB | ||
EGAF00001677116 | fastq.gz | 180.1 MB | ||
EGAF00001677117 | fastq.gz | 190.3 MB | ||
EGAF00001677118 | fastq.gz | 195.5 MB | ||
EGAF00001677119 | fastq.gz | 205.6 MB | ||
EGAF00001677120 | fastq.gz | 200.1 MB | ||
EGAF00001677121 | fastq.gz | 219.3 MB | ||
EGAF00001677122 | fastq.gz | 182.3 MB | ||
EGAF00001677123 | fastq.gz | 195.4 MB | ||
EGAF00001677124 | fastq.gz | 162.4 MB | ||
EGAF00001677125 | fastq.gz | 172.8 MB | ||
EGAF00001677126 | fastq.gz | 170.5 MB | ||
EGAF00001677127 | fastq.gz | 179.4 MB | ||
EGAF00001677128 | fastq.gz | 201.1 MB | ||
EGAF00001677129 | fastq.gz | 224.3 MB | ||
EGAF00001677130 | fastq.gz | 161.8 MB | ||
EGAF00001677131 | fastq.gz | 167.9 MB | ||
340 Files (60.8 GB) |