Hip OA Functional Genomics RNAseq (2017-06-09)
From 9 patients undergoing hip joint replacement surgery for osteoarthritis, we collected 3 cartilage samples each: a low-grade sample (no obvious evidence of damage or fibrillation); a high-grade sample (damaged and fibrillated cartilage); an osteophytic sample (overlaid bony protrusions mainly around the margins of the articular surface). Multiplexed libraries were sequenced on Illumina HiSeq 2000 (75bp paired-end read length) and a cram file was produced for each sample. This dataset contains all the data available for this study on 2017-06-09.
- 12/06/2017
- 27 samples
- DAC: EGAC00001000205
- Technology: Illumina HiSeq 2500
Wellcome Trust Sanger Institute Data Sharing Policy
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Transcriptome Analysis |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00001663877 | cram | 3.0 GB | ||
| EGAF00001663878 | cram | 2.9 GB | ||
| EGAF00001663879 | cram | 3.6 GB | ||
| EGAF00001663880 | cram | 2.8 GB | ||
| EGAF00001663881 | cram | 3.1 GB | ||
| EGAF00001663882 | cram | 3.0 GB | ||
| EGAF00001663883 | cram | 3.7 GB | ||
| EGAF00001663884 | cram | 3.4 GB | ||
| EGAF00001663885 | cram | 3.3 GB | ||
| EGAF00001663886 | cram | 3.9 GB | ||
| EGAF00001663887 | cram | 3.2 GB | ||
| EGAF00001663888 | cram | 3.1 GB | ||
| EGAF00001663889 | cram | 3.4 GB | ||
| EGAF00001663890 | cram | 2.8 GB | ||
| EGAF00001663891 | cram | 3.0 GB | ||
| EGAF00001663892 | cram | 2.5 GB | ||
| EGAF00001663893 | cram | 2.6 GB | ||
| EGAF00001663894 | cram | 2.7 GB | ||
| EGAF00001663895 | cram | 2.8 GB | ||
| EGAF00001663896 | cram | 2.6 GB | ||
| EGAF00001663897 | cram | 2.6 GB | ||
| EGAF00001663898 | cram | 2.6 GB | ||
| EGAF00001663899 | cram | 2.6 GB | ||
| EGAF00001663900 | cram | 2.8 GB | ||
| EGAF00001663901 | cram | 2.6 GB | ||
| EGAF00001663902 | cram | 2.6 GB | ||
| EGAF00001663903 | cram | 2.7 GB | ||
| 27 Files (79.9 GB) | ||||