Single-cell RNA sequencing on 5063 single T cells from six hepatocellular carcinoma patients

T cells isolated from peripheral blood, tumors and adjacent normal tissues from six hepatocellular carcinoma patients. SmartSeq2 and Tang2009 protocol were used to amplify RNA from single T cells. High depth enables simultaneously expression profiling and TCR assembling.

14/08/2017
5063 samples
DAC: EGAC00001000551
Technologies: Illumina HiSeq 2500, Illumina HiSeq 4000

Access Policy1 Study Files

Metadata

Request Access

Data access policy of sequencing data from BIOPIC, Peking University.The DATA ACCESS AGREEMENT is provided at https://github.com/zhangyybio/single-T-cell-data-access. To get the access to raw data, an agreement must be made first. Please fill in the form in https://github.com/zhangyybio/single-T-cell-data-access, and send me (cancerpku@pku.edu.cn) the document with signatures added. Particularly,in the page 4 of the agreement, table "Agreed for User Institution" should contain the signature of the person who can represent your institution, such as institution director

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001002072	Single-cell RNA sequencing on 5063 single T cells isolated from peripheral blood, tumour and adjacent normal tissues from six hepatocellular carcinoma patients.	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00001601839	fq.gz	84.0 MB
EGAF00001601840	fq.gz	88.9 MB
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EGAF00001601844	fq.gz	150.0 MB
EGAF00001601845	fq.gz	84.4 MB
EGAF00001601846	fq.gz	90.2 MB
EGAF00001601847	fq.gz	87.6 MB
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EGAF00001602004	fq.gz	177.0 MB
EGAF00001602005	fq.gz	60.6 MB
EGAF00001602006	fq.gz	65.3 MB
EGAF00001602007	fq.gz	95.8 MB
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EGAF00001621586	fq.gz	88.1 MB
EGAF00001621587	fq.gz	93.0 MB
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EGAF00001621589	fq.gz	94.1 MB
EGAF00001621590	fq.gz	98.2 MB
10115 Files (1.8 TB)