Need Help?

Monomorphic sarcomas RNAseq dataset

Dataset is composed of FASTQ files from 165 samples of small round cell sarcomas which were RNA-sequenced (whole transcriptome) with either Illumina HiSeq 2500 (120 million reads per sample, paired-end 100 pb) or Illumina NextSeq 500 (110 million reads per sample, paired-end 150)

Request Access

Data sharing Policy for study EGAS00001002189

1. The User Institution agrees to only use these Data for the purpose of the Project and only for Research Purposes. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise infringe the confidentiality of information on Research Participants. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect these Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data available in a way that could re-identify the Research Participants, even if access to that data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorised Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or protection of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees to follow the Fort Lauderdale Guidelines (http://www.wellcome.ac.uk/stellent/groups/corporatesite/@policy_communications/documents/web_document/wtd003207.pdf ) and the Toronto Statement (http://www.nature.com/nature/journal/v461/n7261/full/461168a.html). This includes but is not limited to recognising the contribution of the Data Producers and including a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analysing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. In this case, the User Institution agrees to implement licensing policies that will not obstruct further research and to follow the U.S. National Institutes of Health Best Practices for the Licensing of Genomic Inventions (2005) (https://www.icgc.org/files/daco/NIH_BestPracticesLicensingGenomicInventions_2005_en.pdf ) in conformity with the Organisation for Economic Co-operation and Development Guidelines for the Licensing of the Genetic Inventions (2006) (http://www.oecd.org/science/biotech/36198812.pdf ). 11. The User Institution agrees to destroy/discard the Data held, once it is no longer used for the Project, unless obliged to retain the data for archival purposes in conformity with audit or legal requirements. 12. The User Institution will notify the Data access committee within 30 days of any changes or departures of Authorised Personnel. 13. The User Institution will notify the Data access committee prior to any significant changes to the protocol for the Project. 14. The User Institution will notify the Data access committee as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. the Data access committee may terminate this agreement by written notice to the User Institution. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. As an example, this may include specific provisions relating to the Data required by Data Producers other than Franck Tirode or Olivier Delattre. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorised Personnel. The User Institution will procure that the Authorised Personnel comply with the terms of this agreement. 19. This agreement (and any dispute, controversy, proceedings or claim of whatever nature arising out of this agreement or its formation) shall be construed, interpreted and governed by the laws of France and shall be subject to the exclusive jurisdiction of the French courts.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00001429717 fastq.gz 4.1 GB
EGAF00001429718 fastq.gz 4.4 GB
EGAF00001429719 fastq.gz 5.4 GB
EGAF00001429720 fastq.gz 5.7 GB
EGAF00001429721 fastq.gz 7.9 GB
EGAF00001429722 fastq.gz 8.0 GB
EGAF00001429723 fastq.gz 3.8 GB
EGAF00001429724 fastq.gz 4.1 GB
EGAF00001429725 fastq.gz 4.0 GB
EGAF00001429726 fastq.gz 4.3 GB
EGAF00001429727 fastq.gz 4.0 GB
EGAF00001429728 fastq.gz 4.3 GB
EGAF00001429729 fastq.gz 4.2 GB
EGAF00001429730 fastq.gz 4.5 GB
EGAF00001429731 fastq.gz 4.1 GB
EGAF00001429732 fastq.gz 4.4 GB
EGAF00001429733 fastq.gz 4.4 GB
EGAF00001429734 fastq.gz 4.7 GB
EGAF00001429735 fastq.gz 3.7 GB
EGAF00001429736 fastq.gz 4.0 GB
EGAF00001429737 fastq.gz 4.5 GB
EGAF00001429738 fastq.gz 4.8 GB
EGAF00001429739 fastq.gz 3.5 GB
EGAF00001429740 fastq.gz 3.8 GB
EGAF00001429741 fastq.gz 5.8 GB
EGAF00001429742 fastq.gz 6.4 GB
EGAF00001429743 fastq.gz 3.2 GB
EGAF00001429744 fastq.gz 3.5 GB
EGAF00001429745 fastq.gz 3.3 GB
EGAF00001429746 fastq.gz 3.6 GB
EGAF00001429747 fastq.gz 2.7 GB
EGAF00001429748 fastq.gz 2.9 GB
EGAF00001429749 fastq.gz 4.3 GB
EGAF00001429750 fastq.gz 4.7 GB
EGAF00001429751 fastq.gz 4.8 GB
EGAF00001429752 fastq.gz 5.1 GB
EGAF00001429753 fastq.gz 5.6 GB
EGAF00001429754 fastq.gz 5.9 GB
EGAF00001429755 fastq.gz 3.9 GB
EGAF00001429756 fastq.gz 4.2 GB
EGAF00001429757 fastq.gz 4.7 GB
EGAF00001429758 fastq.gz 5.0 GB
EGAF00001429759 fastq.gz 4.3 GB
EGAF00001429760 fastq.gz 4.6 GB
EGAF00001429761 fastq.gz 4.7 GB
EGAF00001429762 fastq.gz 5.0 GB
EGAF00001429763 fastq.gz 3.2 GB
EGAF00001429764 fastq.gz 3.4 GB
EGAF00001429765 fastq.gz 4.1 GB
EGAF00001429766 fastq.gz 4.4 GB
EGAF00001429767 fastq.gz 3.3 GB
EGAF00001429768 fastq.gz 3.5 GB
EGAF00001429769 fastq.gz 4.7 GB
EGAF00001429770 fastq.gz 5.1 GB
EGAF00001429771 fastq.gz 3.9 GB
EGAF00001429772 fastq.gz 4.2 GB
EGAF00001429773 fastq.gz 3.6 GB
EGAF00001429774 fastq.gz 3.9 GB
EGAF00001429775 fastq.gz 3.8 GB
EGAF00001429776 fastq.gz 4.1 GB
EGAF00001429777 fastq.gz 4.4 GB
EGAF00001429778 fastq.gz 4.7 GB
EGAF00001429779 fastq.gz 4.7 GB
EGAF00001429780 fastq.gz 5.1 GB
EGAF00001429781 fastq.gz 3.6 GB
EGAF00001429782 fastq.gz 3.9 GB
EGAF00001429783 fastq.gz 3.3 GB
EGAF00001429784 fastq.gz 3.5 GB
EGAF00001429785 fastq.gz 4.7 GB
EGAF00001429786 fastq.gz 5.0 GB
EGAF00001429787 fastq.gz 3.5 GB
EGAF00001429788 fastq.gz 3.8 GB
EGAF00001429789 fastq.gz 4.1 GB
EGAF00001429790 fastq.gz 4.4 GB
EGAF00001429791 fastq.gz 2.7 GB
EGAF00001429792 fastq.gz 2.9 GB
EGAF00001429793 fastq.gz 3.2 GB
EGAF00001429794 fastq.gz 3.4 GB
EGAF00001429795 fastq.gz 4.4 GB
EGAF00001429796 fastq.gz 4.7 GB
EGAF00001429797 fastq.gz 5.7 GB
EGAF00001429798 fastq.gz 6.1 GB
EGAF00001429799 fastq.gz 6.2 GB
EGAF00001429800 fastq.gz 6.7 GB
EGAF00001429801 fastq.gz 4.6 GB
EGAF00001429802 fastq.gz 4.9 GB
EGAF00001429803 fastq.gz 5.2 GB
EGAF00001429804 fastq.gz 5.5 GB
EGAF00001429805 fastq.gz 5.1 GB
EGAF00001429806 fastq.gz 5.4 GB
EGAF00001429807 fastq.gz 7.1 GB
EGAF00001429808 fastq.gz 7.5 GB
EGAF00001429809 fastq.gz 5.7 GB
EGAF00001429810 fastq.gz 6.0 GB
EGAF00001429811 fastq.gz 5.4 GB
EGAF00001429812 fastq.gz 5.8 GB
EGAF00001429813 fastq.gz 6.4 GB
EGAF00001429814 fastq.gz 6.8 GB
EGAF00001429815 fastq.gz 6.5 GB
EGAF00001429816 fastq.gz 6.9 GB
EGAF00001429817 fastq.gz 5.7 GB
EGAF00001429818 fastq.gz 6.0 GB
EGAF00001429819 fastq.gz 7.3 GB
EGAF00001429820 fastq.gz 7.7 GB
EGAF00001429821 fastq.gz 5.2 GB
EGAF00001429822 fastq.gz 5.5 GB
EGAF00001429823 fastq.gz 5.4 GB
EGAF00001429824 fastq.gz 5.8 GB
EGAF00001429825 fastq.gz 5.4 GB
EGAF00001429826 fastq.gz 5.8 GB
EGAF00001429827 fastq.gz 5.7 GB
EGAF00001429828 fastq.gz 6.1 GB
EGAF00001429829 fastq.gz 6.8 GB
EGAF00001429830 fastq.gz 7.2 GB
EGAF00001429831 fastq.gz 4.6 GB
EGAF00001429832 fastq.gz 4.9 GB
EGAF00001429833 fastq.gz 6.8 GB
EGAF00001429834 fastq.gz 7.2 GB
EGAF00001429835 fastq.gz 6.0 GB
EGAF00001429836 fastq.gz 6.3 GB
EGAF00001429837 fastq.gz 6.3 GB
EGAF00001429838 fastq.gz 6.6 GB
EGAF00001429839 fastq.gz 7.2 GB
EGAF00001429840 fastq.gz 7.6 GB
EGAF00001429841 fastq.gz 6.0 GB
EGAF00001429842 fastq.gz 6.2 GB
EGAF00001429843 fastq.gz 5.9 GB
EGAF00001429844 fastq.gz 6.2 GB
EGAF00001429845 fastq.gz 5.9 GB
EGAF00001429846 fastq.gz 6.2 GB
EGAF00001429847 fastq.gz 4.0 GB
EGAF00001429848 fastq.gz 4.2 GB
EGAF00001429849 fastq.gz 3.3 GB
EGAF00001429850 fastq.gz 3.4 GB
EGAF00001429851 fastq.gz 4.4 GB
EGAF00001429852 fastq.gz 4.7 GB
EGAF00001429853 fastq.gz 5.6 GB
EGAF00001429854 fastq.gz 5.7 GB
EGAF00001429855 fastq.gz 6.5 GB
EGAF00001429856 fastq.gz 6.6 GB
EGAF00001429857 fastq.gz 6.3 GB
EGAF00001429858 fastq.gz 6.4 GB
EGAF00001429859 fastq.gz 5.9 GB
EGAF00001429860 fastq.gz 6.0 GB
EGAF00001429861 fastq.gz 6.0 GB
EGAF00001429862 fastq.gz 6.1 GB
EGAF00001429863 fastq.gz 6.9 GB
EGAF00001429864 fastq.gz 6.9 GB
EGAF00001429865 fastq.gz 8.6 GB
EGAF00001429866 fastq.gz 8.7 GB
EGAF00001429867 fastq.gz 7.5 GB
EGAF00001429868 fastq.gz 7.6 GB
EGAF00001429869 fastq.gz 9.3 GB
EGAF00001429870 fastq.gz 9.5 GB
EGAF00001429871 fastq.gz 9.4 GB
EGAF00001429872 fastq.gz 9.5 GB
EGAF00001429873 fastq.gz 8.0 GB
EGAF00001429874 fastq.gz 8.1 GB
EGAF00001429875 fastq.gz 10.3 GB
EGAF00001429876 fastq.gz 10.5 GB
EGAF00001429877 fastq.gz 7.5 GB
EGAF00001429878 fastq.gz 7.6 GB
EGAF00001429879 fastq.gz 6.0 GB
EGAF00001429880 fastq.gz 6.1 GB
EGAF00001429881 fastq.gz 7.7 GB
EGAF00001429882 fastq.gz 7.7 GB
EGAF00001429883 fastq.gz 6.0 GB
EGAF00001429884 fastq.gz 6.2 GB
EGAF00001429885 fastq.gz 6.7 GB
EGAF00001429886 fastq.gz 6.8 GB
EGAF00001429887 fastq.gz 7.6 GB
EGAF00001429888 fastq.gz 7.8 GB
EGAF00001429889 fastq.gz 7.8 GB
EGAF00001429890 fastq.gz 8.0 GB
EGAF00001429891 fastq.gz 5.7 GB
EGAF00001429892 fastq.gz 5.8 GB
EGAF00001429893 fastq.gz 7.7 GB
EGAF00001429894 fastq.gz 7.8 GB
EGAF00001429895 fastq.gz 6.3 GB
EGAF00001429896 fastq.gz 6.4 GB
EGAF00001429897 fastq.gz 9.1 GB
EGAF00001429898 fastq.gz 9.3 GB
EGAF00001429899 fastq.gz 9.4 GB
EGAF00001429900 fastq.gz 9.6 GB
EGAF00001429901 fastq.gz 8.0 GB
EGAF00001429902 fastq.gz 8.1 GB
EGAF00001429903 fastq.gz 7.3 GB
EGAF00001429904 fastq.gz 7.5 GB
EGAF00001429905 fastq.gz 7.9 GB
EGAF00001429906 fastq.gz 8.0 GB
EGAF00001429907 fastq.gz 7.7 GB
EGAF00001429908 fastq.gz 7.8 GB
EGAF00001429909 fastq.gz 4.9 GB
EGAF00001429910 fastq.gz 4.9 GB
EGAF00001429911 fastq.gz 8.6 GB
EGAF00001429912 fastq.gz 8.7 GB
EGAF00001429913 fastq.gz 10.0 GB
EGAF00001429914 fastq.gz 10.1 GB
EGAF00001429915 fastq.gz 6.5 GB
EGAF00001429916 fastq.gz 6.5 GB
EGAF00001429917 fastq.gz 7.3 GB
EGAF00001429918 fastq.gz 7.4 GB
EGAF00001429919 fastq.gz 11.9 GB
EGAF00001429920 fastq.gz 12.1 GB
EGAF00001429921 fastq.gz 5.1 GB
EGAF00001429922 fastq.gz 5.1 GB
EGAF00001429923 fastq.gz 8.4 GB
EGAF00001429924 fastq.gz 8.3 GB
EGAF00001429925 fastq.gz 10.6 GB
EGAF00001429926 fastq.gz 10.5 GB
EGAF00001429927 fastq.gz 5.9 GB
EGAF00001429928 fastq.gz 6.0 GB
EGAF00001429929 fastq.gz 7.5 GB
EGAF00001429930 fastq.gz 7.5 GB
EGAF00001429931 fastq.gz 10.3 GB
EGAF00001429932 fastq.gz 10.2 GB
EGAF00001429933 fastq.gz 4.8 GB
EGAF00001429934 fastq.gz 4.8 GB
EGAF00001429935 fastq.gz 5.8 GB
EGAF00001429936 fastq.gz 5.8 GB
EGAF00001429937 fastq.gz 8.2 GB
EGAF00001429938 fastq.gz 8.2 GB
EGAF00001429939 fastq.gz 11.8 GB
EGAF00001429940 fastq.gz 11.9 GB
EGAF00001429941 fastq.gz 7.6 GB
EGAF00001429942 fastq.gz 7.7 GB
EGAF00001429943 fastq.gz 7.0 GB
EGAF00001429944 fastq.gz 7.0 GB
EGAF00001429945 fastq.gz 8.6 GB
EGAF00001429946 fastq.gz 8.6 GB
EGAF00001429947 fastq.gz 5.8 GB
EGAF00001429948 fastq.gz 5.8 GB
EGAF00001429949 fastq.gz 8.4 GB
EGAF00001429950 fastq.gz 8.5 GB
EGAF00001429951 fastq.gz 7.4 GB
EGAF00001429952 fastq.gz 7.5 GB
EGAF00001429953 fastq.gz 6.5 GB
EGAF00001429954 fastq.gz 6.4 GB
EGAF00001429955 fastq.gz 8.4 GB
EGAF00001429956 fastq.gz 8.4 GB
EGAF00001429957 fastq.gz 8.1 GB
EGAF00001429958 fastq.gz 8.1 GB
EGAF00001429959 fastq.gz 9.8 GB
EGAF00001429960 fastq.gz 9.8 GB
EGAF00001429961 fastq.gz 8.5 GB
EGAF00001429962 fastq.gz 8.5 GB
EGAF00001429963 fastq.gz 5.7 GB
EGAF00001429964 fastq.gz 5.7 GB
EGAF00001429965 fastq.gz 8.2 GB
EGAF00001429966 fastq.gz 8.2 GB
EGAF00001429967 fastq.gz 6.7 GB
EGAF00001429968 fastq.gz 6.6 GB
EGAF00001429969 fastq.gz 6.9 GB
EGAF00001429970 fastq.gz 6.8 GB
EGAF00001429971 fastq.gz 7.6 GB
EGAF00001429972 fastq.gz 7.6 GB
EGAF00001429973 fastq.gz 11.6 GB
EGAF00001429974 fastq.gz 11.5 GB
EGAF00001429975 fastq.gz 10.9 GB
EGAF00001429976 fastq.gz 10.7 GB
EGAF00001429977 fastq.gz 7.6 GB
EGAF00001429978 fastq.gz 7.6 GB
EGAF00001429979 fastq.gz 7.1 GB
EGAF00001429980 fastq.gz 7.2 GB
EGAF00001429981 fastq.gz 7.1 GB
EGAF00001429982 fastq.gz 7.2 GB
EGAF00001429983 fastq.gz 7.1 GB
EGAF00001429984 fastq.gz 7.1 GB
EGAF00001429985 fastq.gz 8.5 GB
EGAF00001429986 fastq.gz 8.5 GB
EGAF00001429987 fastq.gz 7.9 GB
EGAF00001429988 fastq.gz 8.0 GB
EGAF00001429989 fastq.gz 8.8 GB
EGAF00001429990 fastq.gz 8.9 GB
EGAF00001429991 fastq.gz 7.4 GB
EGAF00001429992 fastq.gz 7.4 GB
EGAF00001429993 fastq.gz 7.7 GB
EGAF00001429994 fastq.gz 7.8 GB
EGAF00001429995 fastq.gz 7.3 GB
EGAF00001429996 fastq.gz 7.4 GB
EGAF00001429997 fastq.gz 7.1 GB
EGAF00001429998 fastq.gz 7.1 GB
EGAF00001429999 fastq.gz 7.2 GB
EGAF00001430000 fastq.gz 7.2 GB
EGAF00001430001 fastq.gz 9.0 GB
EGAF00001430002 fastq.gz 9.1 GB
EGAF00001430003 fastq.gz 7.3 GB
EGAF00001430004 fastq.gz 7.3 GB
EGAF00001430005 fastq.gz 7.3 GB
EGAF00001430006 fastq.gz 7.3 GB
EGAF00001430007 fastq.gz 7.8 GB
EGAF00001430008 fastq.gz 7.8 GB
EGAF00001430009 fastq.gz 6.8 GB
EGAF00001430010 fastq.gz 6.8 GB
EGAF00001430011 fastq.gz 7.7 GB
EGAF00001430012 fastq.gz 7.7 GB
EGAF00001430013 fastq.gz 7.3 GB
EGAF00001430014 fastq.gz 7.4 GB
EGAF00001430015 fastq.gz 7.5 GB
EGAF00001430016 fastq.gz 7.6 GB
EGAF00001430017 fastq.gz 7.1 GB
EGAF00001430018 fastq.gz 7.3 GB
EGAF00001430019 fastq.gz 7.9 GB
EGAF00001430020 fastq.gz 8.0 GB
EGAF00001430021 fastq.gz 6.9 GB
EGAF00001430022 fastq.gz 7.0 GB
EGAF00001430023 fastq.gz 7.1 GB
EGAF00001430024 fastq.gz 7.1 GB
EGAF00001430025 fastq.gz 6.8 GB
EGAF00001430026 fastq.gz 6.8 GB
EGAF00001430027 fastq.gz 6.8 GB
EGAF00001430028 fastq.gz 6.9 GB
EGAF00001430029 fastq.gz 7.3 GB
EGAF00001430030 fastq.gz 7.4 GB
EGAF00001430031 fastq.gz 4.5 GB
EGAF00001430032 fastq.gz 4.5 GB
EGAF00001430033 fastq.gz 3.9 GB
EGAF00001430034 fastq.gz 4.0 GB
EGAF00001430035 fastq.gz 4.9 GB
EGAF00001430036 fastq.gz 5.0 GB
EGAF00001430037 fastq.gz 3.2 GB
EGAF00001430038 fastq.gz 3.2 GB
EGAF00001430039 fastq.gz 3.8 GB
EGAF00001430040 fastq.gz 3.8 GB
EGAF00001430041 fastq.gz 3.8 GB
EGAF00001430042 fastq.gz 3.9 GB
EGAF00001430043 fastq.gz 4.0 GB
EGAF00001430044 fastq.gz 4.1 GB
EGAF00001430045 fastq.gz 4.5 GB
EGAF00001430046 fastq.gz 4.6 GB
330 Files (2.1 TB)