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RNAseq data of polyA+ RNA from Leukocytes from 624 individuals of the ProgeNIA cohort.

We sequenced the polyA+ fraction of the RNA of the leukocytes from 624 sardinian individuals with RNAseq. Prior to library preparation we added either ERCC ExFold RNA Spike-In. An average of 60M reads per samples with 51 bp paired-end reads were generated on a HiSeq 2000 (Illumina). Sequencing reads were then aligned using STAR-2.2.0c2 to the h37d5 reference genome supplemented with the ERCC spike-ins sequences. We further provided an exon-exon junction database that we generated from the GENCODE v14 annotation. In order to remove a contamination from a parallel experiment, we discarded any reads that mapped to the genomic regions of CBLB (chr3:105370773-105592330) and BCL11A (chr2:60672555-60784156). Filtered aligned reads (bam format) are shared.

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DAC for Sardinia Leukocytes polyA RNAseq 624 project

This document refers to the data set, EGAS00001002105 which has been submitted to the European Genome Archive (EGA) for the controlled access by legitimate academic institutions that have agreed to comply with the terms of a Data Access Agreement drafted by IRGB-CNR RNAseq phenotypes access committee. There are a number of steps that a researcher must take to obtain access to this data and the process is overseen by our Data Access Committee, called IRGB-CNR in the persons of Francesco Cucca (francesco.cucca@irgb.cnr.it), Mauro Pala (mauro.pala@irgb.cnr.it), Mara Marongiu (mara.marongiu@irgb.cnr.it) and Carlo Sidore (carlo.sidore@irgb.cnr.it), authorized to approve researchers to have encrypted access to the data submitted to the EGA. Please be advised that Mauro Pala (mauro.pala@irgb.cnr.it) is authorized to upload data to the EGA for archiving and distribution as part of your submission process, which will enable approved researchers to have encrypted access to the data. We can confirm that this submission is consistent with the informed consent of the participants of the study or has been granted ethical approval and is in accordance with the applicable laws and regulations. Sincerely, Francesco Cucca, IRGB CNR Director

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002105 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00001418052 bam 5.7 GB
EGAF00001418053 bam 6.2 GB
EGAF00001418054 bam 7.0 GB
EGAF00001418055 bam 4.9 GB
EGAF00001418056 bam 5.8 GB
EGAF00001418057 bam 5.7 GB
EGAF00001418058 bam 6.1 GB
EGAF00001418059 bam 7.0 GB
EGAF00001418060 bam 5.7 GB
EGAF00001418061 bam 7.4 GB
EGAF00001418062 bam 6.5 GB
EGAF00001418063 bam 6.2 GB
EGAF00001418064 bam 7.1 GB
EGAF00001418065 bam 5.3 GB
EGAF00001418066 bam 6.7 GB
EGAF00001418067 bam 6.6 GB
EGAF00001418068 bam 5.4 GB
EGAF00001418069 bam 7.4 GB
EGAF00001418070 bam 5.2 GB
EGAF00001418071 bam 7.0 GB
EGAF00001418072 bam 4.1 GB
EGAF00001418073 bam 5.6 GB
EGAF00001418074 bam 5.3 GB
EGAF00001418075 bam 6.7 GB
EGAF00001418076 bam 5.4 GB
EGAF00001418077 bam 5.8 GB
EGAF00001418078 bam 6.3 GB
EGAF00001418079 bam 6.1 GB
EGAF00001418080 bam 5.6 GB
EGAF00001418081 bam 6.2 GB
EGAF00001418082 bam 5.6 GB
EGAF00001418083 bam 6.0 GB
EGAF00001418084 bam 5.7 GB
EGAF00001418085 bam 5.8 GB
EGAF00001418086 bam 7.0 GB
EGAF00001418087 bam 7.5 GB
EGAF00001418088 bam 6.7 GB
EGAF00001418089 bam 6.4 GB
EGAF00001418090 bam 5.5 GB
EGAF00001418091 bam 5.9 GB
EGAF00001418092 bam 6.3 GB
EGAF00001418093 bam 5.6 GB
EGAF00001418094 bam 5.2 GB
EGAF00001418095 bam 6.3 GB
EGAF00001418096 bam 5.9 GB
EGAF00001418097 bam 7.4 GB
EGAF00001418098 bam 4.9 GB
EGAF00001418099 bam 5.7 GB
EGAF00001418100 bam 6.2 GB
EGAF00001418101 bam 6.5 GB
EGAF00001418102 bam 6.1 GB
EGAF00001418103 bam 7.0 GB
EGAF00001418104 bam 6.2 GB
EGAF00001418105 bam 5.8 GB
EGAF00001418106 bam 6.2 GB
EGAF00001418107 bam 5.9 GB
EGAF00001418108 bam 6.3 GB
EGAF00001418109 bam 5.7 GB
EGAF00001418110 bam 6.1 GB
EGAF00001418111 bam 4.9 GB
EGAF00001418112 bam 6.6 GB
EGAF00001418113 bam 3.3 GB
EGAF00001418114 bam 6.7 GB
EGAF00001418115 bam 6.2 GB
EGAF00001418116 bam 6.0 GB
EGAF00001418117 bam 6.1 GB
EGAF00001418118 bam 6.5 GB
EGAF00001418119 bam 6.5 GB
EGAF00001418120 bam 6.9 GB
EGAF00001418121 bam 5.6 GB
EGAF00001418122 bam 5.5 GB
EGAF00001418123 bam 5.3 GB
EGAF00001418124 bam 4.2 GB
EGAF00001418125 bam 5.5 GB
EGAF00001418126 bam 5.4 GB
EGAF00001418127 bam 6.6 GB
EGAF00001418128 bam 6.4 GB
EGAF00001418129 bam 6.3 GB
EGAF00001418130 bam 4.8 GB
EGAF00001418131 bam 5.8 GB
EGAF00001418132 bam 6.4 GB
EGAF00001418133 bam 7.2 GB
EGAF00001418134 bam 6.0 GB
EGAF00001418135 bam 5.6 GB
EGAF00001418136 bam 5.7 GB
EGAF00001418137 bam 4.2 GB
EGAF00001418138 bam 4.6 GB
EGAF00001418139 bam 6.4 GB
EGAF00001418140 bam 5.3 GB
EGAF00001418141 bam 7.1 GB
EGAF00001418142 bam 7.2 GB
EGAF00001418143 bam 6.3 GB
EGAF00001418144 bam 6.5 GB
EGAF00001418145 bam 5.7 GB
EGAF00001418146 bam 6.5 GB
EGAF00001418147 bam 6.2 GB
EGAF00001418148 bam 4.8 GB
EGAF00001418149 bam 6.9 GB
EGAF00001418150 bam 5.9 GB
EGAF00001418151 bam 4.5 GB
EGAF00001418152 bam 7.1 GB
EGAF00001418153 bam 5.8 GB
EGAF00001418154 bam 5.8 GB
EGAF00001418155 bam 6.2 GB
EGAF00001418156 bam 4.0 GB
EGAF00001418157 bam 6.0 GB
EGAF00001418158 bam 7.5 GB
EGAF00001418159 bam 5.4 GB
EGAF00001418160 bam 6.7 GB
EGAF00001418161 bam 5.1 GB
EGAF00001418162 bam 7.5 GB
EGAF00001418163 bam 5.4 GB
EGAF00001418164 bam 6.8 GB
EGAF00001418165 bam 4.6 GB
EGAF00001418166 bam 5.8 GB
EGAF00001418167 bam 4.8 GB
EGAF00001418168 bam 6.2 GB
EGAF00001418169 bam 5.7 GB
EGAF00001418170 bam 6.0 GB
EGAF00001418171 bam 4.5 GB
EGAF00001418172 bam 5.2 GB
EGAF00001418173 bam 6.2 GB
EGAF00001418174 bam 4.9 GB
EGAF00001418175 bam 4.7 GB
EGAF00001418176 bam 4.6 GB
EGAF00001418177 bam 6.4 GB
EGAF00001418178 bam 5.3 GB
EGAF00001418179 bam 6.1 GB
EGAF00001418180 bam 5.8 GB
EGAF00001418181 bam 6.5 GB
EGAF00001418182 bam 6.1 GB
EGAF00001418183 bam 6.2 GB
EGAF00001418184 bam 5.7 GB
EGAF00001418185 bam 5.4 GB
EGAF00001418186 bam 6.4 GB
EGAF00001418187 bam 5.9 GB
EGAF00001418188 bam 6.6 GB
EGAF00001418189 bam 5.0 GB
EGAF00001418190 bam 5.7 GB
EGAF00001418191 bam 5.0 GB
EGAF00001418192 bam 5.6 GB
EGAF00001418193 bam 6.8 GB
EGAF00001418194 bam 6.3 GB
EGAF00001418195 bam 6.3 GB
EGAF00001418196 bam 6.1 GB
EGAF00001418197 bam 5.2 GB
EGAF00001418198 bam 5.9 GB
EGAF00001418199 bam 6.8 GB
EGAF00001418200 bam 5.8 GB
EGAF00001418201 bam 6.0 GB
EGAF00001418202 bam 5.5 GB
EGAF00001418203 bam 4.9 GB
EGAF00001418204 bam 4.5 GB
EGAF00001418205 bam 6.6 GB
EGAF00001418206 bam 6.6 GB
EGAF00001418207 bam 6.4 GB
EGAF00001418208 bam 5.4 GB
EGAF00001418209 bam 5.8 GB
EGAF00001418210 bam 4.5 GB
EGAF00001418211 bam 5.9 GB
EGAF00001418212 bam 5.6 GB
EGAF00001418213 bam 6.7 GB
EGAF00001418214 bam 5.6 GB
EGAF00001418215 bam 6.0 GB
EGAF00001418216 bam 5.4 GB
EGAF00001418217 bam 5.4 GB
EGAF00001418218 bam 5.1 GB
EGAF00001418219 bam 5.6 GB
EGAF00001418220 bam 5.8 GB
EGAF00001418221 bam 4.5 GB
EGAF00001418222 bam 6.1 GB
EGAF00001418223 bam 6.5 GB
EGAF00001418224 bam 4.7 GB
EGAF00001418225 bam 5.7 GB
EGAF00001418226 bam 5.7 GB
EGAF00001418227 bam 4.5 GB
EGAF00001418228 bam 5.6 GB
EGAF00001418229 bam 4.5 GB
EGAF00001418230 bam 4.4 GB
EGAF00001418231 bam 6.2 GB
EGAF00001418232 bam 6.6 GB
EGAF00001418233 bam 6.9 GB
EGAF00001418234 bam 5.9 GB
EGAF00001418235 bam 5.8 GB
EGAF00001418236 bam 6.0 GB
EGAF00001418237 bam 6.9 GB
EGAF00001418238 bam 5.7 GB
EGAF00001418239 bam 6.6 GB
EGAF00001418240 bam 6.9 GB
EGAF00001418241 bam 6.5 GB
EGAF00001418242 bam 7.0 GB
EGAF00001418243 bam 7.5 GB
EGAF00001418244 bam 6.9 GB
EGAF00001418245 bam 7.3 GB
EGAF00001418246 bam 4.9 GB
EGAF00001418247 bam 6.2 GB
EGAF00001418248 bam 6.8 GB
EGAF00001418249 bam 5.5 GB
EGAF00001418250 bam 6.4 GB
EGAF00001418251 bam 5.1 GB
EGAF00001418252 bam 4.1 GB
EGAF00001418253 bam 4.5 GB
EGAF00001418254 bam 7.7 GB
EGAF00001418255 bam 4.7 GB
EGAF00001418256 bam 6.1 GB
EGAF00001418257 bam 5.5 GB
EGAF00001418258 bam 5.9 GB
EGAF00001418259 bam 5.6 GB
EGAF00001418260 bam 6.1 GB
EGAF00001418261 bam 6.0 GB
EGAF00001418262 bam 3.8 GB
EGAF00001418263 bam 5.5 GB
EGAF00001418264 bam 5.5 GB
EGAF00001418265 bam 5.1 GB
EGAF00001418266 bam 5.2 GB
EGAF00001418267 bam 7.2 GB
EGAF00001418268 bam 4.5 GB
EGAF00001418269 bam 6.9 GB
EGAF00001418270 bam 6.0 GB
EGAF00001418271 bam 4.4 GB
EGAF00001418272 bam 4.1 GB
EGAF00001418273 bam 4.8 GB
EGAF00001418274 bam 5.5 GB
EGAF00001418275 bam 4.3 GB
EGAF00001418276 bam 6.8 GB
EGAF00001418277 bam 5.2 GB
EGAF00001418278 bam 6.1 GB
EGAF00001418279 bam 6.5 GB
EGAF00001418280 bam 5.9 GB
EGAF00001418281 bam 5.7 GB
EGAF00001418282 bam 5.4 GB
EGAF00001418283 bam 6.6 GB
EGAF00001418284 bam 6.1 GB
EGAF00001418285 bam 6.0 GB
EGAF00001418286 bam 5.1 GB
EGAF00001418287 bam 8.0 GB
EGAF00001418288 bam 6.3 GB
EGAF00001418289 bam 6.3 GB
EGAF00001418290 bam 6.6 GB
EGAF00001418291 bam 6.9 GB
EGAF00001418292 bam 5.4 GB
EGAF00001418293 bam 5.4 GB
EGAF00001418294 bam 5.6 GB
EGAF00001418295 bam 5.5 GB
EGAF00001418296 bam 6.3 GB
EGAF00001418297 bam 6.1 GB
EGAF00001418298 bam 6.3 GB
EGAF00001418299 bam 6.0 GB
EGAF00001418300 bam 5.4 GB
EGAF00001418301 bam 7.1 GB
EGAF00001418302 bam 6.1 GB
EGAF00001418303 bam 6.3 GB
EGAF00001418304 bam 5.1 GB
EGAF00001418305 bam 5.7 GB
EGAF00001418306 bam 4.8 GB
EGAF00001418307 bam 6.8 GB
EGAF00001418308 bam 4.9 GB
EGAF00001418309 bam 5.4 GB
EGAF00001418310 bam 5.8 GB
EGAF00001418311 bam 4.8 GB
EGAF00001418312 bam 5.8 GB
EGAF00001418313 bam 6.2 GB
EGAF00001418314 bam 5.9 GB
EGAF00001418315 bam 5.1 GB
EGAF00001418316 bam 6.9 GB
EGAF00001418317 bam 6.4 GB
EGAF00001418318 bam 5.5 GB
EGAF00001418319 bam 5.4 GB
EGAF00001418320 bam 5.6 GB
EGAF00001418321 bam 5.0 GB
EGAF00001418322 bam 6.4 GB
EGAF00001418323 bam 5.8 GB
EGAF00001418324 bam 6.1 GB
EGAF00001418325 bam 6.4 GB
EGAF00001418326 bam 7.2 GB
EGAF00001418327 bam 5.6 GB
EGAF00001418328 bam 7.6 GB
EGAF00001418329 bam 5.4 GB
EGAF00001418330 bam 4.5 GB
EGAF00001418331 bam 6.7 GB
EGAF00001418332 bam 5.7 GB
EGAF00001418333 bam 5.8 GB
EGAF00001418334 bam 6.5 GB
EGAF00001418335 bam 4.0 GB
EGAF00001418336 bam 6.3 GB
EGAF00001418337 bam 5.3 GB
EGAF00001418338 bam 5.8 GB
EGAF00001418339 bam 5.6 GB
EGAF00001418340 bam 5.9 GB
EGAF00001418341 bam 5.3 GB
EGAF00001418342 bam 6.8 GB
EGAF00001418343 bam 4.9 GB
EGAF00001418344 bam 5.8 GB
EGAF00001418345 bam 6.4 GB
EGAF00001418346 bam 5.8 GB
EGAF00001418347 bam 5.3 GB
EGAF00001418348 bam 5.4 GB
EGAF00001418349 bam 7.4 GB
EGAF00001418350 bam 6.4 GB
EGAF00001418351 bam 5.1 GB
EGAF00001418352 bam 7.2 GB
EGAF00001418353 bam 4.8 GB
EGAF00001418354 bam 5.5 GB
EGAF00001418355 bam 5.6 GB
EGAF00001418356 bam 7.3 GB
EGAF00001418357 bam 6.2 GB
EGAF00001418358 bam 6.6 GB
EGAF00001418359 bam 5.5 GB
EGAF00001418360 bam 6.4 GB
EGAF00001418361 bam 5.6 GB
EGAF00001418362 bam 6.2 GB
EGAF00001418363 bam 5.7 GB
EGAF00001418364 bam 6.0 GB
EGAF00001418365 bam 5.6 GB
EGAF00001418366 bam 5.5 GB
EGAF00001418367 bam 5.8 GB
EGAF00001418368 bam 6.0 GB
EGAF00001418369 bam 5.9 GB
EGAF00001418370 bam 4.8 GB
EGAF00001418371 bam 5.4 GB
EGAF00001418372 bam 6.7 GB
EGAF00001418373 bam 7.3 GB
EGAF00001418374 bam 5.7 GB
EGAF00001418375 bam 4.2 GB
EGAF00001418376 bam 5.4 GB
EGAF00001418377 bam 5.5 GB
EGAF00001418378 bam 6.1 GB
EGAF00001418379 bam 5.3 GB
EGAF00001418380 bam 5.8 GB
EGAF00001418381 bam 5.0 GB
EGAF00001418382 bam 7.2 GB
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EGAF00001418385 bam 6.0 GB
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EGAF00001418390 bam 6.2 GB
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EGAF00001418394 bam 6.3 GB
EGAF00001418395 bam 5.1 GB
EGAF00001418396 bam 6.0 GB
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EGAF00001418398 bam 6.4 GB
EGAF00001418399 bam 5.9 GB
EGAF00001418400 bam 6.0 GB
EGAF00001418401 bam 5.7 GB
EGAF00001418402 bam 4.9 GB
EGAF00001418403 bam 5.3 GB
EGAF00001418404 bam 5.4 GB
EGAF00001418405 bam 5.8 GB
EGAF00001418406 bam 4.9 GB
EGAF00001418407 bam 6.9 GB
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EGAF00001418409 bam 6.2 GB
EGAF00001418410 bam 4.3 GB
EGAF00001418411 bam 7.0 GB
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EGAF00001418413 bam 5.2 GB
EGAF00001418414 bam 5.9 GB
EGAF00001418415 bam 6.6 GB
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EGAF00001418417 bam 6.2 GB
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EGAF00001418419 bam 5.6 GB
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EGAF00001418421 bam 5.7 GB
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EGAF00001418423 bam 6.4 GB
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EGAF00001418428 bam 6.3 GB
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EGAF00001418444 bam 8.2 GB
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EGAF00001418551 bam 5.4 GB
EGAF00001418552 bam 7.3 GB
EGAF00001418553 bam 6.2 GB
EGAF00001418554 bam 6.0 GB
EGAF00001418555 bam 5.3 GB
EGAF00001418556 bam 5.7 GB
EGAF00001418557 bam 5.2 GB
EGAF00001418558 bam 4.9 GB
EGAF00001418559 bam 5.3 GB
EGAF00001418560 bam 7.1 GB
EGAF00001418561 bam 5.8 GB
EGAF00001418562 bam 5.1 GB
EGAF00001418563 bam 5.5 GB
EGAF00001418564 bam 6.0 GB
EGAF00001418565 bam 5.9 GB
EGAF00001418566 bam 5.8 GB
EGAF00001418567 bam 10.7 GB
EGAF00001418568 bam 5.5 GB
EGAF00001418569 bam 5.8 GB
EGAF00001418570 bam 5.5 GB
EGAF00001418571 bam 5.6 GB
EGAF00001418572 bam 5.9 GB
EGAF00001418573 bam 6.9 GB
EGAF00001418574 bam 5.4 GB
EGAF00001418575 bam 5.7 GB
EGAF00001418576 bam 5.2 GB
EGAF00001418577 bam 6.4 GB
EGAF00001418578 bam 5.5 GB
EGAF00001418579 bam 5.7 GB
EGAF00001418580 bam 5.7 GB
EGAF00001418581 bam 5.6 GB
EGAF00001418582 bam 7.8 GB
EGAF00001418583 bam 7.3 GB
EGAF00001418584 bam 6.4 GB
EGAF00001418585 bam 5.1 GB
EGAF00001418586 bam 6.6 GB
EGAF00001418587 bam 6.4 GB
EGAF00001418588 bam 6.5 GB
EGAF00001418589 bam 6.5 GB
EGAF00001418590 bam 4.7 GB
EGAF00001418591 bam 6.7 GB
EGAF00001418592 bam 6.0 GB
EGAF00001418593 bam 6.1 GB
EGAF00001418594 bam 5.1 GB
EGAF00001418595 bam 6.0 GB
EGAF00001418596 bam 6.3 GB
EGAF00001418597 bam 7.1 GB
EGAF00001418598 bam 7.2 GB
EGAF00001418599 bam 5.1 GB
EGAF00001418600 bam 6.5 GB
EGAF00001418601 bam 4.8 GB
EGAF00001418602 bam 6.0 GB
EGAF00001418603 bam 5.3 GB
EGAF00001418604 bam 5.1 GB
EGAF00001418605 bam 9.5 GB
EGAF00001418606 bam 5.9 GB
EGAF00001418607 bam 6.7 GB
EGAF00001418608 bam 6.6 GB
EGAF00001418609 bam 10.8 GB
EGAF00001418610 bam 7.2 GB
EGAF00001418611 bam 6.4 GB
EGAF00001418612 bam 6.7 GB
EGAF00001418613 bam 6.2 GB
EGAF00001418614 bam 7.4 GB
EGAF00001418615 bam 7.0 GB
EGAF00001418616 bam 7.1 GB
EGAF00001418617 bam 5.4 GB
EGAF00001418618 bam 4.8 GB
EGAF00001418619 bam 7.0 GB
EGAF00001418620 bam 5.8 GB
EGAF00001418621 bam 5.5 GB
EGAF00001418622 bam 6.2 GB
EGAF00001418623 bam 6.4 GB
EGAF00001418624 bam 5.3 GB
EGAF00001418625 bam 5.6 GB
EGAF00001418626 bam 5.2 GB
EGAF00001418627 bam 7.1 GB
EGAF00001418628 bam 5.7 GB
EGAF00001418629 bam 5.2 GB
EGAF00001418630 bam 6.7 GB
EGAF00001418631 bam 5.9 GB
EGAF00001418632 bam 7.5 GB
EGAF00001418633 bam 6.1 GB
EGAF00001418634 bam 5.6 GB
EGAF00001418635 bam 4.9 GB
EGAF00001418636 bam 5.6 GB
EGAF00001418637 bam 4.0 GB
EGAF00001418638 bam 5.6 GB
EGAF00001418639 bam 5.7 GB
EGAF00001418640 bam 8.6 GB
EGAF00001418641 bam 6.6 GB
EGAF00001418642 bam 6.2 GB
EGAF00001418643 bam 5.4 GB
EGAF00001418644 bam 5.8 GB
EGAF00001418645 bam 4.4 GB
EGAF00001418646 bam 7.5 GB
EGAF00001418647 bam 5.5 GB
EGAF00001418648 bam 4.7 GB
EGAF00001418649 bam 5.6 GB
EGAF00001418650 bam 5.2 GB
EGAF00001418651 bam 6.9 GB
EGAF00001418652 bam 5.7 GB
EGAF00001418653 bam 6.1 GB
EGAF00001418654 bam 5.7 GB
EGAF00001418655 bam 5.6 GB
EGAF00001418656 bam 6.2 GB
EGAF00001418657 bam 6.8 GB
EGAF00001418658 bam 6.0 GB
EGAF00001418659 bam 5.0 GB
EGAF00001418660 bam 5.4 GB
EGAF00001418661 bam 6.5 GB
EGAF00001418662 bam 6.0 GB
EGAF00001418663 bam 5.6 GB
EGAF00001418664 bam 5.8 GB
EGAF00001418665 bam 6.1 GB
EGAF00001418666 bam 5.6 GB
EGAF00001418667 bam 4.9 GB
EGAF00001418668 bam 6.9 GB
EGAF00001418669 bam 6.0 GB
EGAF00001418670 bam 6.8 GB
EGAF00001418671 bam 6.2 GB
EGAF00001418672 bam 5.4 GB
EGAF00001418673 bam 5.5 GB
EGAF00001418674 bam 6.1 GB
EGAF00001418675 bam 4.5 GB
624 Files (3.7 TB)