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Bam files from whole exome sequencing (WES)from multiple laser microdissected regions from tumor and paired biopsies from metastatic lesions.

In this study we characterized genomic alterations in three bladder cancer patients with metastatic disease courses. Multiple regions were procured by laser microdissection or punctures from primary tumor, lymph node metastases and from distant metastases. Data provided here consist of 35 Bam files for WES (32 Tumors and 2 blood, 1 adjacent normal)

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MOMA DAC Access Policy

This document specifies the policy for granting access to the European Genome-phenome Archive (EGA) secure Web based tools for managing data access permissions to the data stored in the EGA database. Access is granted to those Data Access Committee members named in this document by Paul Flicek, head of Genes, Genomes and Variation.Conditions of access:The account holder will abide by all current and future policies of the EBI for computer use as well as computer use policies of the European Molecular Biology Laboratory (EMBL), of which the EBI is a part. All EGA specific policies and standard operating procedures (SOPs) must also be followed. All applicable policies will be provided to the authorized users. Method of access:The EBI will create a personal account for the authorized person. The account username and password together with a RSA key provide access to the secure EGA infrastructure. A separate document with detailed guidelines on how to access and use these tools is provided to each account holder. The EGA help-desk provides training when needed.Review:All individuals will access to the EGA user authorization tools will be reviewed annually by Paul Flicek. Any staff changes affecting the authorized person must be provided immediately to Paul Flicek (flicek@ebi.ac.uk).Authorized Data Access Committee user:Henrik Hornshøj (hhj@ki.au.dk) and Søren Vang (vang@ki.au.dk)Department of Molecular Medicine (MOMA), Aarhus University Hospital, Brendstrupgårdsvej 100, 8200 Aarhus N, Denmark

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00001407193 bam 24.2 GB
EGAF00001407194 bam 81.3 GB
EGAF00001407195 bam 27.6 GB
EGAF00001407196 bam 194.5 GB
EGAF00001407197 bam 16.2 GB
EGAF00001407198 bam 29.2 GB
EGAF00001407199 bam 27.4 GB
EGAF00001407200 bam 18.2 GB
EGAF00001407201 bam 21.3 GB
EGAF00001407202 bam 21.6 GB
EGAF00001407203 bam 23.5 GB
EGAF00001407204 bam 6.4 GB
EGAF00001407205 bam 56.0 GB
EGAF00001407206 bam 1.0 GB
EGAF00001407207 bam 9.8 GB
EGAF00001407208 bam 1.1 GB
EGAF00001407209 bam 7.5 GB
EGAF00001407210 bam 13.4 GB
EGAF00001407211 bam 35.4 GB
EGAF00001407212 bam 20.7 GB
EGAF00001407213 bam 24.6 GB
EGAF00001407214 bam 73.0 GB
EGAF00001407215 bam 19.7 GB
EGAF00001407216 bam 26.4 GB
EGAF00001407217 bam 8.4 GB
EGAF00001407218 bam 24.0 GB
EGAF00001407219 bam 15.4 GB
EGAF00001407220 bam 30.2 GB
EGAF00001407221 bam 44.5 GB
EGAF00001407222 bam 13.1 GB
EGAF00001407223 bam 24.6 GB
EGAF00001407224 bam 39.8 GB
EGAF00001407225 bam 84.3 GB
EGAF00001407226 bam 24.6 GB
EGAF00001407227 bam 19.9 GB
35 Files (1.1 TB)