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Exome Sequencing

Exome sequencing of for 10 patients: 10 tumors, 10 cell lines and 7 blood samples (for 3 patients blood was not available)

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Data Access Policy for NGS data

European Genome-phenome Archive European Bioinformatics Institute European Molecular Biology Laboratory Wellcome Trust Genome Campus Hinxton, Cambridge, CB10 1SD United Kingdom 18/7/16 ICM, Hôpital Pitié Salpêtrière, 47 Boulevard de l'Hôpital, 75013 Paris GlioTeX-ICM, EGAC00001000513 This document specifies the policy for granting access to the European Genome-phenome Archive (EGA) secure Web based tools for managing data access permissions to the data stored in the EGA database. Access is granted to those Data Access Committee members named in this document by Paul Flicek, head of Genes, Genomes and Variation. Conditions of access: The account holder will abide by all current and future policies of the EBI for computer use as well as computer use policies of the European Molecular Biology Laboratory (EMBL), of which the EBI is a part. All EGA specific policies and standard operating procedures (SOPs) must also be followed. All applicable policies will be provided to the authorized users. Method of access: The EBI will create a personal account for the authorized person. The account username and password together with a RSA key provide access to the secure EGA infrastructure. A separate document with detailed guidelines on how to access and use these tools is provided to each account holder. The EGA helpdesk provides training when needed. Review: All individuals access to the EGA user authorization tools will be reviewed annually by Paul Flicek. Any staff changes affecting the authorized person must be provided immediately to Paul Flicek (flicek@ebi.ac.uk). Authorized Data Access Committee user: Dr. Ahmed Idbaih Service de Neurologie 2-Mazarin, 47/83 Boulevard de l’Hôpital, 75013 Paris, France ahmed.idbaih@aphp.fr Supervisor of Authorized user: Dr. Ahmed Idbaih Principle investigator of GlioTeX project ahmed.idbaih@aphp.fr

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00001308527 bam 7.3 GB
EGAF00001308528 bam 7.4 GB
EGAF00001308529 bam 7.0 GB
EGAF00001308530 bam 6.6 GB
EGAF00001308531 bam 9.3 GB
EGAF00001308532 bam 6.9 GB
EGAF00001308533 bam 7.3 GB
EGAF00001308534 bam 7.2 GB
EGAF00001308535 bam 4.9 GB
EGAF00001308536 bam 4.2 GB
EGAF00001308537 bam 7.1 GB
EGAF00001308538 bam 8.0 GB
EGAF00001308539 bam 8.6 GB
EGAF00001308540 bam 6.3 GB
EGAF00001308541 bam 7.8 GB
EGAF00001308542 bam 4.4 GB
EGAF00001308543 bam 7.5 GB
EGAF00001308544 bam 9.5 GB
EGAF00001308545 bam 2.3 GB
EGAF00001308546 bam 4.7 GB
EGAF00001308547 bam 5.6 GB
EGAF00001308548 bam 6.7 GB
EGAF00001308549 bam 7.1 GB
EGAF00001308550 bam 9.7 GB
EGAF00001308551 bam 7.0 GB
EGAF00001308552 bam 5.9 GB
EGAF00001308553 bam 3.4 GB
27 Files (179.6 GB)