ICGC PCAWG Dataset: CMDI-UK_PCAWG_WGS_BWA
ICGC PCAWG Dataset for WGS BAM aligned using BWA MEM. Project: CMDI-UK.
- 14/09/2016
- 98 samples
- DAC: EGAC00001000010
- HMB DUO:0000006 (version: 2021-02-23)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
- NPUNCU DUO:0000018 (version: 2021-02-23)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
- PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
- GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.
ICGC Data Access
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001001692 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00001143147 | bam | 123.3 GB | ||
| EGAF00001143148 | bai | 15.3 MB | ||
| EGAF00001143149 | xml.gz | 5.5 kB | ||
| EGAF00001143150 | bam | 136.2 GB | ||
| EGAF00001143151 | bai | 14.3 MB | ||
| EGAF00001143152 | xml.gz | 5.7 kB | ||
| EGAF00001143153 | bam | 129.8 GB | ||
| EGAF00001143154 | bai | 15.6 MB | ||
| EGAF00001143155 | xml.gz | 9.1 kB | ||
| EGAF00001143156 | bam | 124.9 GB | ||
| EGAF00001143157 | bai | 15.2 MB | ||
| EGAF00001143158 | xml.gz | 5.5 kB | ||
| EGAF00001143159 | bam | 86.2 GB | ||
| EGAF00001143160 | bai | 12.7 MB | ||
| EGAF00001143161 | xml.gz | 5.2 kB | ||
| EGAF00001143162 | bam | 92.8 GB | ||
| EGAF00001143163 | bai | 12.4 MB | ||
| EGAF00001143164 | xml.gz | 5.3 kB | ||
| EGAF00001143165 | bam | 129.2 GB | ||
| EGAF00001143166 | bai | 21.1 MB | ||
| EGAF00001143167 | xml.gz | 5.5 kB | ||
| EGAF00001143168 | bam | 94.9 GB | ||
| EGAF00001143169 | bai | 18.3 MB | ||
| EGAF00001143170 | xml.gz | 5.2 kB | ||
| EGAF00001143171 | bam | 88.1 GB | ||
| EGAF00001143172 | bai | 13.2 MB | ||
| EGAF00001143173 | xml.gz | 5.3 kB | ||
| EGAF00001143174 | bam | 125.8 GB | ||
| EGAF00001143175 | bai | 15.3 MB | ||
| EGAF00001143176 | xml.gz | 5.6 kB | ||
| EGAF00001143177 | bam | 128.1 GB | ||
| EGAF00001143178 | bai | 15.1 MB | ||
| EGAF00001143179 | xml.gz | 5.4 kB | ||
| EGAF00001143180 | bam | 125.2 GB | ||
| EGAF00001143181 | bai | 13.6 MB | ||
| EGAF00001143182 | xml.gz | 5.5 kB | ||
| EGAF00001143183 | bam | 127.7 GB | ||
| EGAF00001143184 | bai | 14.6 MB | ||
| EGAF00001143185 | xml.gz | 5.5 kB | ||
| EGAF00001143186 | bam | 143.4 GB | ||
| EGAF00001143187 | bai | 14.3 MB | ||
| EGAF00001143188 | xml.gz | 5.5 kB | ||
| EGAF00001143189 | bam | 131.4 GB | ||
| EGAF00001143190 | bai | 17.7 MB | ||
| EGAF00001143191 | xml.gz | 5.9 kB | ||
| EGAF00001143192 | bam | 132.2 GB | ||
| EGAF00001143193 | bai | 13.8 MB | ||
| EGAF00001143194 | xml.gz | 9.2 kB | ||
| EGAF00001143195 | bam | 137.6 GB | ||
| EGAF00001143196 | bai | 17.2 MB | ||
| EGAF00001143197 | xml.gz | 5.5 kB | ||
| EGAF00001143198 | bam | 111.3 GB | ||
| EGAF00001143199 | bai | 13.6 MB | ||
| EGAF00001143200 | xml.gz | 5.4 kB | ||
| EGAF00001143201 | bam | 95.5 GB | ||
| EGAF00001143202 | bai | 16.4 MB | ||
| EGAF00001143203 | xml.gz | 5.2 kB | ||
| EGAF00001143204 | bam | 128.5 GB | ||
| EGAF00001143205 | bai | 13.2 MB | ||
| EGAF00001143206 | xml.gz | 5.5 kB | ||
| EGAF00001143207 | bam | 124.6 GB | ||
| EGAF00001143208 | bai | 13.7 MB | ||
| EGAF00001143209 | xml.gz | 5.5 kB | ||
| EGAF00001143210 | bam | 144.9 GB | ||
| EGAF00001143211 | bai | 15.6 MB | ||
| EGAF00001143212 | xml.gz | 5.7 kB | ||
| EGAF00001143213 | bam | 95.8 GB | ||
| EGAF00001143214 | bai | 15.5 MB | ||
| EGAF00001143215 | xml.gz | 5.2 kB | ||
| EGAF00001143216 | bam | 122.5 GB | ||
| EGAF00001143217 | bai | 16.8 MB | ||
| EGAF00001143218 | xml.gz | 9.2 kB | ||
| EGAF00001143219 | bam | 125.6 GB | ||
| EGAF00001143220 | bai | 12.9 MB | ||
| EGAF00001143221 | xml.gz | 5.5 kB | ||
| EGAF00001143222 | bam | 122.1 GB | ||
| EGAF00001143223 | bai | 15.0 MB | ||
| EGAF00001143224 | xml.gz | 5.5 kB | ||
| EGAF00001143225 | bam | 139.6 GB | ||
| EGAF00001143226 | bai | 14.2 MB | ||
| EGAF00001143227 | xml.gz | 5.8 kB | ||
| EGAF00001143228 | bam | 144.6 GB | ||
| EGAF00001143229 | bai | 16.1 MB | ||
| EGAF00001143230 | xml.gz | 5.4 kB | ||
| EGAF00001143231 | bam | 136.2 GB | ||
| EGAF00001143232 | bai | 16.0 MB | ||
| EGAF00001143233 | xml.gz | 5.9 kB | ||
| EGAF00001143234 | bam | 124.4 GB | ||
| EGAF00001143235 | bai | 17.8 MB | ||
| EGAF00001143236 | xml.gz | 5.5 kB | ||
| EGAF00001143237 | bam | 119.3 GB | ||
| EGAF00001143238 | bai | 15.9 MB | ||
| EGAF00001143239 | xml.gz | 9.2 kB | ||
| EGAF00001143240 | bam | 126.2 GB | ||
| EGAF00001143241 | bai | 14.4 MB | ||
| EGAF00001143242 | xml.gz | 5.5 kB | ||
| EGAF00001143243 | bam | 134.4 GB | ||
| EGAF00001143244 | bai | 15.0 MB | ||
| EGAF00001143245 | xml.gz | 5.5 kB | ||
| EGAF00001143246 | bam | 143.0 GB | ||
| EGAF00001143247 | bai | 17.4 MB | ||
| EGAF00001143248 | xml.gz | 5.4 kB | ||
| EGAF00001143249 | bam | 96.6 GB | ||
| EGAF00001143250 | bai | 12.5 MB | ||
| EGAF00001143251 | xml.gz | 5.5 kB | ||
| EGAF00001143252 | bam | 93.4 GB | ||
| EGAF00001143253 | bai | 13.2 MB | ||
| EGAF00001143254 | xml.gz | 5.3 kB | ||
| EGAF00001143255 | bam | 143.4 GB | ||
| EGAF00001143256 | bai | 14.9 MB | ||
| EGAF00001143257 | xml.gz | 5.5 kB | ||
| EGAF00001143258 | bam | 136.5 GB | ||
| EGAF00001143259 | bai | 19.8 MB | ||
| EGAF00001143260 | xml.gz | 5.5 kB | ||
| EGAF00001143261 | bam | 117.4 GB | ||
| EGAF00001143262 | bai | 14.4 MB | ||
| EGAF00001143263 | xml.gz | 5.5 kB | ||
| EGAF00001143264 | bam | 133.9 GB | ||
| EGAF00001143265 | bai | 22.9 MB | ||
| EGAF00001143266 | xml.gz | 5.3 kB | ||
| EGAF00001143267 | bam | 97.8 GB | ||
| EGAF00001143268 | bai | 15.0 MB | ||
| EGAF00001143269 | xml.gz | 5.5 kB | ||
| EGAF00001143273 | bam | 135.2 GB | ||
| EGAF00001143274 | bai | 14.8 MB | ||
| EGAF00001143275 | xml.gz | 6.0 kB | ||
| EGAF00001143276 | bam | 133.7 GB | ||
| EGAF00001143277 | bai | 15.7 MB | ||
| EGAF00001143278 | xml.gz | 5.8 kB | ||
| EGAF00001143279 | bam | 145.0 GB | ||
| EGAF00001143280 | bai | 15.6 MB | ||
| EGAF00001143281 | xml.gz | 6.0 kB | ||
| EGAF00001143282 | bam | 141.7 GB | ||
| EGAF00001143283 | bai | 14.0 MB | ||
| EGAF00001143284 | xml.gz | 5.5 kB | ||
| EGAF00001143285 | bam | 130.0 GB | ||
| EGAF00001143286 | bai | 13.6 MB | ||
| EGAF00001143287 | xml.gz | 5.8 kB | ||
| EGAF00001143288 | bam | 137.7 GB | ||
| EGAF00001143289 | bai | 14.9 MB | ||
| EGAF00001143290 | xml.gz | 5.7 kB | ||
| EGAF00001143291 | bam | 128.5 GB | ||
| EGAF00001143292 | bai | 16.8 MB | ||
| EGAF00001143293 | xml.gz | 5.8 kB | ||
| EGAF00001143294 | bam | 102.9 GB | ||
| EGAF00001143295 | bai | 12.6 MB | ||
| EGAF00001143296 | xml.gz | 5.5 kB | ||
| EGAF00001143297 | bam | 137.6 GB | ||
| EGAF00001143298 | bai | 17.3 MB | ||
| EGAF00001143299 | xml.gz | 5.9 kB | ||
| EGAF00001143300 | bam | 107.5 GB | ||
| EGAF00001143301 | bai | 13.5 MB | ||
| EGAF00001143302 | xml.gz | 5.6 kB | ||
| EGAF00001143303 | bam | 126.0 GB | ||
| EGAF00001143304 | bai | 15.3 MB | ||
| EGAF00001143305 | xml.gz | 5.5 kB | ||
| EGAF00001143306 | bam | 141.3 GB | ||
| EGAF00001143307 | bai | 17.9 MB | ||
| EGAF00001143308 | xml.gz | 5.5 kB | ||
| EGAF00001143309 | bam | 121.1 GB | ||
| EGAF00001143310 | bai | 14.4 MB | ||
| EGAF00001143311 | xml.gz | 5.5 kB | ||
| EGAF00001143312 | bam | 124.2 GB | ||
| EGAF00001143313 | bai | 18.1 MB | ||
| EGAF00001143314 | xml.gz | 9.2 kB | ||
| EGAF00001143315 | bam | 123.1 GB | ||
| EGAF00001143316 | bai | 13.8 MB | ||
| EGAF00001143317 | xml.gz | 5.5 kB | ||
| EGAF00001143318 | bam | 129.1 GB | ||
| EGAF00001143319 | bai | 14.7 MB | ||
| EGAF00001143320 | xml.gz | 5.8 kB | ||
| EGAF00001143321 | bam | 93.4 GB | ||
| EGAF00001143322 | bai | 11.9 MB | ||
| EGAF00001143323 | xml.gz | 5.3 kB | ||
| EGAF00001143324 | bam | 131.2 GB | ||
| EGAF00001143325 | bai | 14.3 MB | ||
| EGAF00001143326 | xml.gz | 5.5 kB | ||
| EGAF00001143327 | bam | 108.1 GB | ||
| EGAF00001143328 | bai | 15.0 MB | ||
| EGAF00001143329 | xml.gz | 5.5 kB | ||
| EGAF00001143330 | bam | 123.3 GB | ||
| EGAF00001143331 | bai | 16.7 MB | ||
| EGAF00001143332 | xml.gz | 5.6 kB | ||
| EGAF00001143333 | bam | 101.5 GB | ||
| EGAF00001143334 | bai | 16.4 MB | ||
| EGAF00001143335 | xml.gz | 5.2 kB | ||
| EGAF00001143336 | bam | 129.5 GB | ||
| EGAF00001143337 | bai | 17.4 MB | ||
| EGAF00001143338 | xml.gz | 9.7 kB | ||
| EGAF00001143339 | bam | 126.1 GB | ||
| EGAF00001143340 | bai | 14.9 MB | ||
| EGAF00001143341 | xml.gz | 5.5 kB | ||
| EGAF00001144367 | bam | 100.3 GB | ||
| EGAF00001144368 | bai | 12.8 MB | ||
| EGAF00001144369 | xml.gz | 5.5 kB | ||
| EGAF00001145657 | bam | 144.1 GB | ||
| EGAF00001145658 | bai | 17.0 MB | ||
| EGAF00001145659 | xml.gz | 5.8 kB | ||
| EGAF00001145660 | bam | 131.9 GB | ||
| EGAF00001145661 | bai | 14.5 MB | ||
| EGAF00001145662 | xml.gz | 5.7 kB | ||
| EGAF00001171911 | bam | 127.0 GB | ||
| EGAF00001171912 | bai | 16.9 MB | ||
| EGAF00001171913 | xml.gz | 5.5 kB | ||
| EGAF00001171917 | bam | 153.7 GB | ||
| EGAF00001171918 | bai | 16.9 MB | ||
| EGAF00001171919 | xml.gz | 6.0 kB | ||
| EGAF00001171920 | bam | 131.4 GB | ||
| EGAF00001171921 | bai | 14.8 MB | ||
| EGAF00001171922 | xml.gz | 5.5 kB | ||
| EGAF00001171923 | bam | 133.2 GB | ||
| EGAF00001171924 | bai | 15.9 MB | ||
| EGAF00001171925 | xml.gz | 5.4 kB | ||
| EGAF00001171926 | bam | 129.1 GB | ||
| EGAF00001171927 | bai | 13.0 MB | ||
| EGAF00001171928 | xml.gz | 5.5 kB | ||
| EGAF00001171929 | bam | 118.1 GB | ||
| EGAF00001171930 | bai | 13.1 MB | ||
| EGAF00001171931 | xml.gz | 5.5 kB | ||
| EGAF00001171932 | bam | 116.1 GB | ||
| EGAF00001171933 | bai | 14.2 MB | ||
| EGAF00001171934 | xml.gz | 5.4 kB | ||
| EGAF00001171935 | bam | 127.1 GB | ||
| EGAF00001171936 | bai | 14.8 MB | ||
| EGAF00001171937 | xml.gz | 5.4 kB | ||
| EGAF00001171938 | bam | 148.7 GB | ||
| EGAF00001171939 | bai | 19.6 MB | ||
| EGAF00001171940 | xml.gz | 5.5 kB | ||
| EGAF00001171941 | bam | 116.9 GB | ||
| EGAF00001171942 | bai | 15.1 MB | ||
| EGAF00001171943 | xml.gz | 5.4 kB | ||
| EGAF00001171944 | bam | 113.7 GB | ||
| EGAF00001171945 | bai | 14.3 MB | ||
| EGAF00001171946 | xml.gz | 5.5 kB | ||
| EGAF00001171947 | bam | 153.6 GB | ||
| EGAF00001171948 | bai | 14.8 MB | ||
| EGAF00001171949 | xml.gz | 5.8 kB | ||
| EGAF00001171950 | bam | 153.9 GB | ||
| EGAF00001171951 | bai | 16.7 MB | ||
| EGAF00001171952 | xml.gz | 6.0 kB | ||
| EGAF00001171953 | bam | 122.3 GB | ||
| EGAF00001171954 | bai | 15.4 MB | ||
| EGAF00001171955 | xml.gz | 9.7 kB | ||
| EGAF00001171956 | bam | 153.5 GB | ||
| EGAF00001171957 | bai | 17.0 MB | ||
| EGAF00001171958 | xml.gz | 5.8 kB | ||
| EGAF00001171959 | bam | 150.9 GB | ||
| EGAF00001171960 | bai | 18.6 MB | ||
| EGAF00001171961 | xml.gz | 5.8 kB | ||
| EGAF00001171962 | bam | 128.2 GB | ||
| EGAF00001171963 | bai | 28.2 MB | ||
| EGAF00001171964 | xml.gz | 5.6 kB | ||
| EGAF00001171968 | bam | 115.1 GB | ||
| EGAF00001171969 | bai | 14.2 MB | ||
| EGAF00001171970 | xml.gz | 5.5 kB | ||
| EGAF00001171971 | bam | 110.1 GB | ||
| EGAF00001171972 | bai | 14.2 MB | ||
| EGAF00001171973 | xml.gz | 5.5 kB | ||
| EGAF00001171974 | bam | 156.2 GB | ||
| EGAF00001171975 | bai | 16.3 MB | ||
| EGAF00001171976 | xml.gz | 5.9 kB | ||
| EGAF00001171977 | bam | 147.6 GB | ||
| EGAF00001171978 | bai | 16.4 MB | ||
| EGAF00001171979 | xml.gz | 5.6 kB | ||
| EGAF00001171980 | bam | 161.5 GB | ||
| EGAF00001171981 | bai | 24.0 MB | ||
| EGAF00001171982 | xml.gz | 5.8 kB | ||
| EGAF00001171983 | bam | 158.2 GB | ||
| EGAF00001171984 | bai | 17.7 MB | ||
| EGAF00001171985 | xml.gz | 5.8 kB | ||
| EGAF00001171989 | bam | 135.8 GB | ||
| EGAF00001171990 | bai | 15.5 MB | ||
| EGAF00001171991 | xml.gz | 5.5 kB | ||
| EGAF00001171992 | bam | 150.5 GB | ||
| EGAF00001171993 | bai | 15.9 MB | ||
| EGAF00001171994 | xml.gz | 5.4 kB | ||
| EGAF00001171995 | bam | 130.4 GB | ||
| EGAF00001171996 | bai | 16.2 MB | ||
| EGAF00001171997 | xml.gz | 5.5 kB | ||
| EGAF00001171998 | bam | 102.6 GB | ||
| EGAF00001171999 | bai | 12.7 MB | ||
| EGAF00001172000 | xml.gz | 5.3 kB | ||
| EGAF00001172001 | bam | 122.0 GB | ||
| EGAF00001172002 | bai | 12.8 MB | ||
| EGAF00001172003 | xml.gz | 5.8 kB | ||
| EGAF00001172004 | bam | 114.2 GB | ||
| EGAF00001172005 | bai | 15.5 MB | ||
| EGAF00001172006 | xml.gz | 5.8 kB | ||
| EGAF00001172007 | bam | 152.6 GB | ||
| EGAF00001172008 | bai | 16.9 MB | ||
| EGAF00001172009 | xml.gz | 5.7 kB | ||
| EGAF00001172010 | bam | 152.5 GB | ||
| EGAF00001172011 | bai | 17.4 MB | ||
| EGAF00001172012 | xml.gz | 5.5 kB | ||
| 294 Files (12.5 TB) | ||||