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Transcriptome profiling for Korean Early Onset Gastric Cancer

To identify transcriptome profile in this unique subset of gastric cancers, RNA-seq analyses were performed using frozen cancer tissue. Adjacent normal tissue of the same patients were used in differently expressed gene selection and fusion gene prediction.

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Korean Diffuse Gastric cancer

Jan 9, 2104European Genome-phenome ArchiveEuropean Bioinformatics InstituteEuropean Molecular Biology LaboratoryWellcome Trust Genome CampusHinxton, Cambridge, CB10 1SDUnited KingdomDAC NAME AND ACCESSIONThis document specifies the policy for granting access to the European Genome-phenome Archive (EGA) secure Web based tools for managing data access permissions to the data stored in the EGA database. Access is granted to those Data Access Committee members named in this document by Paul Flicek, head of Genes, Genomes and Variation.Conditions of access:The account holder will abide by all current and future policies of the EBI for computer use as well as computer use policies of the European Molecular Biology Laboratory (EMBL), of which the EBI is a part. All EGA specific policies and standard operating procedures (SOPs) must also be followed. All applicable policies will be provided to the authorized users. Method of access:The EBI will create a personal account for the authorized person. The account username and password together with a RSA key provide access to the secure EGA infrastructure. A separate document with detailed guidelines on how to access and use these tools is provided to each account holder. The EGA help-desk provides training when needed.Review:All individuals will access to the EGA user authorization tools will be reviewed annually by Paul Flicek. Any staff changes affecting the authorized person must be provided immediately to Paul Flicek (flicek@ebi.ac.uk).Authorized Data Access Committee user:<Full name>Hark K. Kim<Postal address for RSA Key>National Cancer Center, 323 Ilsanro, Goyang, Gyeonggi, 410-769, Republic of Korea<Email>hkim@ncc.re.krSignature of authorized user indicating that this policy has been read and understood.Supervisor of Authorized user:<Full name> Hark K. Kim<Title>Chief, Biomolecular Function Research Branch<Email>hkim@ncc.re.krSignature supervisor of authorized user indicating that this policy has been read and understood

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001001859 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00001210840 bam 10.7 GB
EGAF00001210841 bam 12.0 GB
EGAF00001210842 bam 11.0 GB
EGAF00001210843 bam 8.6 GB
EGAF00001210844 bam 12.9 GB
EGAF00001210845 bam 13.4 GB
EGAF00001210846 bam 10.6 GB
EGAF00001210847 bam 12.8 GB
EGAF00001210848 bam 8.4 GB
EGAF00001210849 bam 7.2 GB
EGAF00001210850 bam 8.0 GB
EGAF00001210851 bam 7.7 GB
EGAF00001210852 bam 9.8 GB
EGAF00001210853 bam 7.4 GB
EGAF00001210854 bam 3.8 GB
EGAF00001210855 bam 14.6 GB
EGAF00001210856 bam 9.1 GB
EGAF00001210857 bam 15.2 GB
EGAF00001210858 bam 13.7 GB
EGAF00001210859 bam 14.8 GB
EGAF00001210860 bam 9.6 GB
EGAF00001210861 bam 9.3 GB
EGAF00001210862 bam 9.9 GB
EGAF00001210863 bam 11.6 GB
EGAF00001210864 bam 9.2 GB
EGAF00001210865 bam 10.9 GB
EGAF00001210866 bam 8.4 GB
EGAF00001210867 bam 13.7 GB
EGAF00001210868 bam 14.7 GB
EGAF00001210869 bam 16.6 GB
EGAF00001210870 bam 16.2 GB
EGAF00001210871 bam 14.5 GB
EGAF00001210872 bam 14.4 GB
EGAF00001210873 bam 12.0 GB
EGAF00001210874 bam 10.8 GB
EGAF00001210875 bam 11.6 GB
EGAF00001210876 bam 13.3 GB
EGAF00001210877 bam 9.0 GB
EGAF00001210878 bam 10.5 GB
EGAF00001210879 bam 15.5 GB
EGAF00001210880 bam 9.6 GB
EGAF00001210881 bam 8.2 GB
EGAF00001210882 bam 15.2 GB
EGAF00001210883 bam 10.1 GB
EGAF00001210884 bam 17.8 GB
EGAF00001210885 bam 9.1 GB
EGAF00001210886 bam 4.9 GB
EGAF00001210887 bam 5.4 GB
EGAF00001210888 bam 4.2 GB
EGAF00001210889 bam 20.9 GB
EGAF00001210890 bam 4.7 GB
EGAF00001210891 bam 10.1 GB
EGAF00001210892 bam 3.9 GB
EGAF00001210893 bam 4.1 GB
EGAF00001210894 bam 3.8 GB
EGAF00001210895 bam 9.9 GB
EGAF00001210896 bam 2.5 GB
EGAF00001210897 bam 3.5 GB
EGAF00001210898 bam 10.9 GB
EGAF00001210899 bam 3.3 GB
EGAF00001210900 bam 3.7 GB
EGAF00001210901 bam 12.0 GB
EGAF00001210902 bam 13.9 GB
EGAF00001210903 bam 7.3 GB
EGAF00001210904 bam 13.0 GB
EGAF00001210905 bam 5.3 GB
EGAF00001210906 bam 10.8 GB
EGAF00001210907 bam 8.9 GB
EGAF00001210908 bam 8.8 GB
EGAF00001210909 bam 9.1 GB
EGAF00001210910 bam 8.4 GB
EGAF00001210911 bam 9.7 GB
EGAF00001210912 bam 9.0 GB
EGAF00001210913 bam 16.4 GB
EGAF00001210914 bam 4.9 GB
EGAF00001210915 bam 13.5 GB
EGAF00001210916 bam 4.8 GB
EGAF00001210917 bam 16.7 GB
EGAF00001210918 bam 14.7 GB
EGAF00001210919 bam 11.0 GB
EGAF00001210920 bam 9.7 GB
EGAF00001210921 bam 10.4 GB
EGAF00001210922 bam 10.0 GB
EGAF00001210923 bam 9.8 GB
EGAF00001210924 bam 10.8 GB
EGAF00001210925 bam 11.2 GB
EGAF00001210926 bam 11.2 GB
EGAF00001210927 bam 12.3 GB
EGAF00001210928 bam 12.1 GB
EGAF00001210929 bam 9.9 GB
EGAF00001210930 bam 10.5 GB
EGAF00001210931 bam 9.1 GB
EGAF00001210932 bam 8.2 GB
EGAF00001210933 bam 9.2 GB
EGAF00001210934 bam 7.6 GB
EGAF00001210935 bam 12.7 GB
EGAF00001210936 bam 25.9 GB
EGAF00001210937 bam 30.9 GB
EGAF00001210938 bam 16.4 GB
EGAF00001210939 bam 18.6 GB
EGAF00001210940 bam 7.8 GB
EGAF00001210941 bam 11.6 GB
EGAF00001210942 bam 20.9 GB
EGAF00001210943 bam 17.2 GB
EGAF00001210944 bam 6.4 GB
EGAF00001210945 bam 9.0 GB
EGAF00001210946 bam 11.5 GB
EGAF00001210947 bam 12.2 GB
EGAF00001210948 bam 9.2 GB
EGAF00001210949 bam 11.6 GB
EGAF00001210950 bam 8.4 GB
EGAF00001210951 bam 6.2 GB
EGAF00001210952 bam 9.4 GB
EGAF00001210953 bam 7.9 GB
EGAF00001210954 bam 7.9 GB
EGAF00001210955 bam 8.9 GB
EGAF00001210956 bam 15.6 GB
EGAF00001210957 bam 16.4 GB
EGAF00001210958 bam 8.8 GB
EGAF00001210959 bam 6.5 GB
EGAF00001210960 bam 6.1 GB
EGAF00001210961 bam 18.5 GB
EGAF00001210962 bam 8.6 GB
EGAF00001210963 bam 6.4 GB
EGAF00001210964 bam 5.9 GB
EGAF00001210965 bam 5.5 GB
EGAF00001210966 bam 10.6 GB
EGAF00001210967 bam 10.6 GB
EGAF00001210968 bam 19.9 GB
EGAF00001210969 bam 11.4 GB
EGAF00001210970 bam 6.2 GB
EGAF00001210971 bam 9.0 GB
EGAF00001210972 bam 7.1 GB
EGAF00001210973 bam 20.8 GB
EGAF00001210974 bam 8.3 GB
EGAF00001210975 bam 9.0 GB
EGAF00001210976 bam 8.7 GB
EGAF00001210977 bam 13.7 GB
138 Files (1.5 TB)