ICGC PCAWG Dataset: PAEN-IT_PCAWG_WGS_BWA
ICGC PCAWG Dataset for WGS BAM aligned using BWA MEM. Project: PAEN-IT.
- 17/06/2016
- 74 samples
- DAC: EGAC00001000010
- HMB DUO:0000006 (version: 2021-02-23)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
- NPUNCU DUO:0000018 (version: 2021-02-23)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
- PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
- GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.
ICGC Data Access
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00001196690 | bam | 223.9 GB | ||
| EGAF00001196691 | bai | 28.6 MB | ||
| EGAF00001196692 | xml.gz | 5.9 kB | ||
| EGAF00001196693 | bam | 177.1 GB | ||
| EGAF00001196694 | bai | 24.7 MB | ||
| EGAF00001196695 | xml.gz | 5.5 kB | ||
| EGAF00001196696 | bam | 127.3 GB | ||
| EGAF00001196697 | bai | 19.9 MB | ||
| EGAF00001196698 | xml.gz | 5.4 kB | ||
| EGAF00001197158 | bam | 139.3 GB | ||
| EGAF00001197159 | bai | 24.6 MB | ||
| EGAF00001197160 | xml.gz | 5.8 kB | ||
| EGAF00001197161 | bam | 302.3 GB | ||
| EGAF00001197162 | bai | 88.6 MB | ||
| EGAF00001197163 | xml.gz | 5.9 kB | ||
| EGAF00001197164 | bam | 150.9 GB | ||
| EGAF00001197165 | bai | 23.0 MB | ||
| EGAF00001197166 | xml.gz | 5.5 kB | ||
| EGAF00001197167 | bam | 100.6 GB | ||
| EGAF00001197168 | bai | 14.4 MB | ||
| EGAF00001197169 | xml.gz | 5.4 kB | ||
| EGAF00001197170 | bam | 290.8 GB | ||
| EGAF00001197171 | bai | 62.4 MB | ||
| EGAF00001197172 | xml.gz | 6.0 kB | ||
| EGAF00001197173 | bam | 109.4 GB | ||
| EGAF00001197174 | bai | 18.9 MB | ||
| EGAF00001197175 | xml.gz | 5.3 kB | ||
| EGAF00001197176 | bam | 206.5 GB | ||
| EGAF00001197177 | bai | 36.6 MB | ||
| EGAF00001197178 | xml.gz | 5.6 kB | ||
| EGAF00001197179 | bam | 144.1 GB | ||
| EGAF00001197180 | bai | 27.3 MB | ||
| EGAF00001197181 | xml.gz | 5.3 kB | ||
| EGAF00001197182 | bam | 255.3 GB | ||
| EGAF00001197183 | bai | 44.7 MB | ||
| EGAF00001197184 | xml.gz | 6.0 kB | ||
| EGAF00001197185 | bam | 182.0 GB | ||
| EGAF00001197186 | bai | 40.2 MB | ||
| EGAF00001197187 | xml.gz | 5.8 kB | ||
| EGAF00001197188 | bam | 105.6 GB | ||
| EGAF00001197189 | bai | 15.3 MB | ||
| EGAF00001197190 | xml.gz | 5.3 kB | ||
| EGAF00001197191 | bam | 120.2 GB | ||
| EGAF00001197192 | bai | 18.9 MB | ||
| EGAF00001197193 | xml.gz | 5.4 kB | ||
| EGAF00001197194 | bam | 193.4 GB | ||
| EGAF00001197195 | bai | 19.6 MB | ||
| EGAF00001197196 | xml.gz | 5.8 kB | ||
| EGAF00001197197 | bam | 130.0 GB | ||
| EGAF00001197198 | bai | 22.1 MB | ||
| EGAF00001197199 | xml.gz | 5.4 kB | ||
| EGAF00001197200 | bam | 192.4 GB | ||
| EGAF00001197201 | bai | 29.9 MB | ||
| EGAF00001197202 | xml.gz | 5.5 kB | ||
| EGAF00001197203 | bam | 249.6 GB | ||
| EGAF00001197204 | bai | 43.9 MB | ||
| EGAF00001197205 | xml.gz | 5.9 kB | ||
| EGAF00001197206 | bam | 140.2 GB | ||
| EGAF00001197207 | bai | 29.9 MB | ||
| EGAF00001197208 | xml.gz | 5.4 kB | ||
| EGAF00001197209 | bam | 173.3 GB | ||
| EGAF00001197210 | bai | 26.2 MB | ||
| EGAF00001197211 | xml.gz | 5.6 kB | ||
| EGAF00001197212 | bam | 198.3 GB | ||
| EGAF00001197213 | bai | 22.4 MB | ||
| EGAF00001197214 | xml.gz | 5.9 kB | ||
| EGAF00001197215 | bam | 138.8 GB | ||
| EGAF00001197216 | bai | 46.4 MB | ||
| EGAF00001197217 | xml.gz | 5.4 kB | ||
| EGAF00001197218 | bam | 149.5 GB | ||
| EGAF00001197219 | bai | 26.2 MB | ||
| EGAF00001197220 | xml.gz | 5.8 kB | ||
| EGAF00001197221 | bam | 109.4 GB | ||
| EGAF00001197222 | bai | 17.3 MB | ||
| EGAF00001197223 | xml.gz | 5.4 kB | ||
| EGAF00001197224 | bam | 211.2 GB | ||
| EGAF00001197225 | bai | 23.1 MB | ||
| EGAF00001197226 | xml.gz | 5.9 kB | ||
| EGAF00001197227 | bam | 152.9 GB | ||
| EGAF00001197228 | bai | 14.1 MB | ||
| EGAF00001197229 | xml.gz | 5.5 kB | ||
| EGAF00001197230 | bam | 137.2 GB | ||
| EGAF00001197231 | bai | 20.5 MB | ||
| EGAF00001197232 | xml.gz | 5.6 kB | ||
| EGAF00001197233 | bam | 114.2 GB | ||
| EGAF00001197234 | bai | 17.3 MB | ||
| EGAF00001197235 | xml.gz | 5.4 kB | ||
| EGAF00001197236 | bam | 77.5 GB | ||
| EGAF00001197237 | bai | 12.8 MB | ||
| EGAF00001197238 | xml.gz | 5.0 kB | ||
| EGAF00001197242 | bam | 122.6 GB | ||
| EGAF00001197243 | bai | 19.2 MB | ||
| EGAF00001197244 | xml.gz | 5.4 kB | ||
| EGAF00001197245 | bam | 210.8 GB | ||
| EGAF00001197246 | bai | 42.1 MB | ||
| EGAF00001197247 | xml.gz | 5.7 kB | ||
| EGAF00001197248 | bam | 143.3 GB | ||
| EGAF00001197249 | bai | 25.1 MB | ||
| EGAF00001197250 | xml.gz | 5.4 kB | ||
| EGAF00001197251 | bam | 201.4 GB | ||
| EGAF00001197252 | bai | 21.3 MB | ||
| EGAF00001197253 | xml.gz | 5.8 kB | ||
| EGAF00001197254 | bam | 203.8 GB | ||
| EGAF00001197255 | bai | 34.8 MB | ||
| EGAF00001197256 | xml.gz | 6.3 kB | ||
| EGAF00001197257 | bam | 122.0 GB | ||
| EGAF00001197258 | bai | 18.4 MB | ||
| EGAF00001197259 | xml.gz | 5.4 kB | ||
| EGAF00001197260 | bam | 100.8 GB | ||
| EGAF00001197261 | bai | 17.7 MB | ||
| EGAF00001197262 | xml.gz | 6.2 kB | ||
| EGAF00001197263 | bam | 114.1 GB | ||
| EGAF00001197264 | bai | 17.2 MB | ||
| EGAF00001197265 | xml.gz | 5.4 kB | ||
| EGAF00001197266 | bam | 192.5 GB | ||
| EGAF00001197267 | bai | 29.2 MB | ||
| EGAF00001197268 | xml.gz | 5.6 kB | ||
| EGAF00001197269 | bam | 124.8 GB | ||
| EGAF00001197270 | bai | 19.2 MB | ||
| EGAF00001197271 | xml.gz | 5.4 kB | ||
| EGAF00001197272 | bam | 162.0 GB | ||
| EGAF00001197273 | bai | 29.3 MB | ||
| EGAF00001197274 | xml.gz | 5.8 kB | ||
| EGAF00001197275 | bam | 157.3 GB | ||
| EGAF00001197276 | bai | 15.9 MB | ||
| EGAF00001197277 | xml.gz | 5.5 kB | ||
| EGAF00001197278 | bam | 159.6 GB | ||
| EGAF00001197279 | bai | 25.1 MB | ||
| EGAF00001197280 | xml.gz | 6.1 kB | ||
| EGAF00001197281 | bam | 151.4 GB | ||
| EGAF00001197282 | bai | 30.6 MB | ||
| EGAF00001197283 | xml.gz | 5.4 kB | ||
| EGAF00001197284 | bam | 273.1 GB | ||
| EGAF00001197285 | bai | 53.0 MB | ||
| EGAF00001197286 | xml.gz | 5.9 kB | ||
| EGAF00001197287 | bam | 194.0 GB | ||
| EGAF00001197288 | bai | 31.3 MB | ||
| EGAF00001197289 | xml.gz | 5.5 kB | ||
| EGAF00001197290 | bam | 208.3 GB | ||
| EGAF00001197291 | bai | 34.4 MB | ||
| EGAF00001197292 | xml.gz | 5.9 kB | ||
| EGAF00001197293 | bam | 163.6 GB | ||
| EGAF00001197294 | bai | 29.9 MB | ||
| EGAF00001197295 | xml.gz | 5.8 kB | ||
| EGAF00001197296 | bam | 146.7 GB | ||
| EGAF00001197297 | bai | 28.1 MB | ||
| EGAF00001197298 | xml.gz | 5.4 kB | ||
| EGAF00001197551 | bam | 150.8 GB | ||
| EGAF00001197552 | bai | 16.8 MB | ||
| EGAF00001197553 | xml.gz | 5.5 kB | ||
| EGAF00001197554 | bam | 136.0 GB | ||
| EGAF00001197555 | bai | 20.5 MB | ||
| EGAF00001197556 | xml.gz | 5.5 kB | ||
| EGAF00001197557 | bam | 188.0 GB | ||
| EGAF00001197558 | bai | 20.1 MB | ||
| EGAF00001197559 | xml.gz | 5.9 kB | ||
| EGAF00001197560 | bam | 100.2 GB | ||
| EGAF00001197561 | bai | 15.8 MB | ||
| EGAF00001197562 | xml.gz | 5.4 kB | ||
| EGAF00001197963 | bam | 177.1 GB | ||
| EGAF00001197964 | bai | 46.8 MB | ||
| EGAF00001197965 | xml.gz | 5.4 kB | ||
| EGAF00001197966 | bam | 153.4 GB | ||
| EGAF00001197967 | bai | 27.0 MB | ||
| EGAF00001197968 | xml.gz | 5.8 kB | ||
| EGAF00001197969 | bam | 204.0 GB | ||
| EGAF00001197970 | bai | 34.4 MB | ||
| EGAF00001197971 | xml.gz | 5.6 kB | ||
| EGAF00001198263 | bam | 198.8 GB | ||
| EGAF00001198264 | bai | 22.5 MB | ||
| EGAF00001198265 | xml.gz | 5.9 kB | ||
| EGAF00001198266 | bam | 197.7 GB | ||
| EGAF00001198267 | bai | 25.6 MB | ||
| EGAF00001198268 | xml.gz | 5.9 kB | ||
| EGAF00001198269 | bam | 146.9 GB | ||
| EGAF00001198270 | bai | 27.0 MB | ||
| EGAF00001198271 | xml.gz | 5.4 kB | ||
| EGAF00001198272 | bam | 120.4 GB | ||
| EGAF00001198273 | bai | 15.7 MB | ||
| EGAF00001198274 | xml.gz | 5.5 kB | ||
| EGAF00001198275 | bam | 188.2 GB | ||
| EGAF00001198276 | bai | 19.4 MB | ||
| EGAF00001198277 | xml.gz | 5.9 kB | ||
| EGAF00001198278 | bam | 134.0 GB | ||
| EGAF00001198279 | bai | 20.9 MB | ||
| EGAF00001198280 | xml.gz | 5.4 kB | ||
| EGAF00001198281 | bam | 115.4 GB | ||
| EGAF00001198282 | bai | 18.8 MB | ||
| EGAF00001198283 | xml.gz | 5.4 kB | ||
| EGAF00001198284 | bam | 93.6 GB | ||
| EGAF00001198285 | bai | 14.4 MB | ||
| EGAF00001198286 | xml.gz | 5.4 kB | ||
| EGAF00001198287 | bam | 104.7 GB | ||
| EGAF00001198288 | bai | 25.1 MB | ||
| EGAF00001198289 | xml.gz | 5.1 kB | ||
| EGAF00001198290 | bam | 195.5 GB | ||
| EGAF00001198291 | bai | 24.3 MB | ||
| EGAF00001198292 | xml.gz | 5.9 kB | ||
| EGAF00001198293 | bam | 196.1 GB | ||
| EGAF00001198294 | bai | 33.0 MB | ||
| EGAF00001198295 | xml.gz | 5.6 kB | ||
| EGAF00001198296 | bam | 193.1 GB | ||
| EGAF00001198297 | bai | 31.8 MB | ||
| EGAF00001198298 | xml.gz | 5.6 kB | ||
| EGAF00001198299 | bam | 202.3 GB | ||
| EGAF00001198300 | bai | 23.3 MB | ||
| EGAF00001198301 | xml.gz | 5.9 kB | ||
| EGAF00001198302 | bam | 116.1 GB | ||
| EGAF00001198303 | bai | 16.3 MB | ||
| EGAF00001198304 | xml.gz | 5.5 kB | ||
| EGAF00001198305 | bam | 239.3 GB | ||
| EGAF00001198306 | bai | 36.7 MB | ||
| EGAF00001198307 | xml.gz | 5.8 kB | ||
| EGAF00001198308 | bam | 144.9 GB | ||
| EGAF00001198309 | bai | 27.3 MB | ||
| EGAF00001198310 | xml.gz | 5.4 kB | ||
| EGAF00001198311 | bam | 137.0 GB | ||
| EGAF00001198312 | bai | 24.6 MB | ||
| EGAF00001198313 | xml.gz | 5.4 kB | ||
| EGAF00001198314 | bam | 90.6 GB | ||
| EGAF00001198315 | bai | 18.6 MB | ||
| EGAF00001198316 | xml.gz | 5.1 kB | ||
| 222 Files (12.1 TB) | ||||