ICGC PCAWG Dataset: BRCA-UK_PCAWG_WGS_BWA
ICGC PCAWG Dataset for WGS BAM aligned using BWA MEM. Project: BRCA-UK.
- 17/06/2016
- 90 samples
- DAC: EGAC00001000010
- HMB DUO:0000006 (version: 2021-02-23)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
- NPUNCU DUO:0000018 (version: 2021-02-23)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
- PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
- GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.
ICGC Data Access
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001001692 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00001082830 | bam | 99.4 GB | ||
| EGAF00001082831 | bai | 13.2 MB | ||
| EGAF00001082832 | xml.gz | 5.9 kB | ||
| EGAF00001082833 | bam | 119.6 GB | ||
| EGAF00001082834 | bai | 27.7 MB | ||
| EGAF00001082835 | xml.gz | 9.4 kB | ||
| EGAF00001082836 | bam | 163.0 GB | ||
| EGAF00001082837 | bai | 18.9 MB | ||
| EGAF00001082838 | xml.gz | 6.1 kB | ||
| EGAF00001082839 | bam | 148.4 GB | ||
| EGAF00001082840 | bai | 21.1 MB | ||
| EGAF00001082841 | xml.gz | 9.1 kB | ||
| EGAF00001082842 | bam | 137.6 GB | ||
| EGAF00001082843 | bai | 16.2 MB | ||
| EGAF00001082844 | xml.gz | 6.3 kB | ||
| EGAF00001082845 | bam | 144.6 GB | ||
| EGAF00001082846 | bai | 19.9 MB | ||
| EGAF00001082847 | xml.gz | 6.0 kB | ||
| EGAF00001082848 | bam | 133.6 GB | ||
| EGAF00001082849 | bai | 24.3 MB | ||
| EGAF00001082850 | xml.gz | 9.2 kB | ||
| EGAF00001082851 | bam | 124.7 GB | ||
| EGAF00001082852 | bai | 15.6 MB | ||
| EGAF00001082853 | xml.gz | 5.9 kB | ||
| EGAF00001082854 | bam | 118.0 GB | ||
| EGAF00001082855 | bai | 22.4 MB | ||
| EGAF00001082856 | xml.gz | 8.5 kB | ||
| EGAF00001082857 | bam | 105.1 GB | ||
| EGAF00001082858 | bai | 19.9 MB | ||
| EGAF00001082859 | xml.gz | 7.4 kB | ||
| EGAF00001082860 | bam | 114.8 GB | ||
| EGAF00001082861 | bai | 14.8 MB | ||
| EGAF00001082862 | xml.gz | 6.1 kB | ||
| EGAF00001082863 | bam | 131.9 GB | ||
| EGAF00001082864 | bai | 12.9 MB | ||
| EGAF00001082865 | xml.gz | 10.1 kB | ||
| EGAF00001082866 | bam | 182.3 GB | ||
| EGAF00001082867 | bai | 17.0 MB | ||
| EGAF00001082868 | xml.gz | 5.8 kB | ||
| EGAF00001082869 | bam | 133.4 GB | ||
| EGAF00001082870 | bai | 14.5 MB | ||
| EGAF00001082871 | xml.gz | 8.0 kB | ||
| EGAF00001082872 | bam | 123.8 GB | ||
| EGAF00001082873 | bai | 30.7 MB | ||
| EGAF00001082874 | xml.gz | 6.2 kB | ||
| EGAF00001085015 | bam | 101.5 GB | ||
| EGAF00001085016 | bai | 12.8 MB | ||
| EGAF00001085017 | xml.gz | 5.2 kB | ||
| EGAF00001085018 | bam | 137.3 GB | ||
| EGAF00001085019 | bai | 14.0 MB | ||
| EGAF00001085020 | xml.gz | 9.4 kB | ||
| EGAF00001085021 | bam | 143.9 GB | ||
| EGAF00001085022 | bai | 23.5 MB | ||
| EGAF00001085023 | xml.gz | 9.4 kB | ||
| EGAF00001085024 | bam | 126.6 GB | ||
| EGAF00001085025 | bai | 33.2 MB | ||
| EGAF00001085026 | xml.gz | 6.2 kB | ||
| EGAF00001085027 | bam | 123.1 GB | ||
| EGAF00001085028 | bai | 17.1 MB | ||
| EGAF00001085029 | xml.gz | 6.4 kB | ||
| EGAF00001085030 | bam | 114.7 GB | ||
| EGAF00001085031 | bai | 16.6 MB | ||
| EGAF00001085032 | xml.gz | 5.8 kB | ||
| EGAF00001085033 | bam | 138.1 GB | ||
| EGAF00001085034 | bai | 16.7 MB | ||
| EGAF00001085035 | xml.gz | 6.1 kB | ||
| EGAF00001085036 | bam | 128.9 GB | ||
| EGAF00001085037 | bai | 14.5 MB | ||
| EGAF00001085038 | xml.gz | 5.5 kB | ||
| EGAF00001085039 | bam | 122.8 GB | ||
| EGAF00001085040 | bai | 20.8 MB | ||
| EGAF00001085041 | xml.gz | 7.3 kB | ||
| EGAF00001085042 | bam | 147.2 GB | ||
| EGAF00001085043 | bai | 17.8 MB | ||
| EGAF00001085044 | xml.gz | 6.1 kB | ||
| EGAF00001085045 | bam | 135.6 GB | ||
| EGAF00001085046 | bai | 13.2 MB | ||
| EGAF00001085047 | xml.gz | 10.2 kB | ||
| EGAF00001085048 | bam | 130.2 GB | ||
| EGAF00001085049 | bai | 16.8 MB | ||
| EGAF00001085050 | xml.gz | 6.2 kB | ||
| EGAF00001085054 | bam | 146.7 GB | ||
| EGAF00001085055 | bai | 18.5 MB | ||
| EGAF00001085056 | xml.gz | 6.2 kB | ||
| EGAF00001085057 | bam | 127.6 GB | ||
| EGAF00001085058 | bai | 15.7 MB | ||
| EGAF00001085059 | xml.gz | 5.9 kB | ||
| EGAF00001085060 | bam | 136.0 GB | ||
| EGAF00001085061 | bai | 34.0 MB | ||
| EGAF00001085062 | xml.gz | 7.8 kB | ||
| EGAF00001085063 | bam | 126.7 GB | ||
| EGAF00001085064 | bai | 28.3 MB | ||
| EGAF00001085065 | xml.gz | 11.4 kB | ||
| EGAF00001085066 | bam | 145.3 GB | ||
| EGAF00001085067 | bai | 14.0 MB | ||
| EGAF00001085068 | xml.gz | 7.9 kB | ||
| EGAF00001085069 | bam | 128.3 GB | ||
| EGAF00001085070 | bai | 21.6 MB | ||
| EGAF00001085071 | xml.gz | 10.2 kB | ||
| EGAF00001085072 | bam | 133.8 GB | ||
| EGAF00001085073 | bai | 21.9 MB | ||
| EGAF00001085074 | xml.gz | 8.1 kB | ||
| EGAF00001085075 | bam | 98.6 GB | ||
| EGAF00001085076 | bai | 12.9 MB | ||
| EGAF00001085077 | xml.gz | 8.0 kB | ||
| EGAF00001085135 | bam | 117.8 GB | ||
| EGAF00001085136 | bai | 18.3 MB | ||
| EGAF00001085137 | xml.gz | 9.2 kB | ||
| EGAF00001085138 | bam | 114.4 GB | ||
| EGAF00001085139 | bai | 24.8 MB | ||
| EGAF00001085140 | xml.gz | 8.9 kB | ||
| EGAF00001085141 | bam | 140.4 GB | ||
| EGAF00001085142 | bai | 14.5 MB | ||
| EGAF00001085143 | xml.gz | 5.4 kB | ||
| EGAF00001085144 | bam | 120.4 GB | ||
| EGAF00001085145 | bai | 15.8 MB | ||
| EGAF00001085146 | xml.gz | 5.9 kB | ||
| EGAF00001085147 | bam | 122.9 GB | ||
| EGAF00001085148 | bai | 21.6 MB | ||
| EGAF00001085149 | xml.gz | 7.1 kB | ||
| EGAF00001085150 | bam | 146.5 GB | ||
| EGAF00001085151 | bai | 23.7 MB | ||
| EGAF00001085152 | xml.gz | 9.4 kB | ||
| EGAF00001085153 | bam | 110.6 GB | ||
| EGAF00001085154 | bai | 13.7 MB | ||
| EGAF00001085155 | xml.gz | 5.5 kB | ||
| EGAF00001085156 | bam | 106.3 GB | ||
| EGAF00001085157 | bai | 13.3 MB | ||
| EGAF00001085158 | xml.gz | 7.6 kB | ||
| EGAF00001085159 | bam | 173.8 GB | ||
| EGAF00001085160 | bai | 21.5 MB | ||
| EGAF00001085161 | xml.gz | 6.3 kB | ||
| EGAF00001085162 | bam | 147.7 GB | ||
| EGAF00001085163 | bai | 16.7 MB | ||
| EGAF00001085164 | xml.gz | 6.5 kB | ||
| EGAF00001085165 | bam | 101.1 GB | ||
| EGAF00001085166 | bai | 17.1 MB | ||
| EGAF00001085167 | xml.gz | 7.4 kB | ||
| EGAF00001085168 | bam | 115.4 GB | ||
| EGAF00001085169 | bai | 19.0 MB | ||
| EGAF00001085170 | xml.gz | 6.5 kB | ||
| EGAF00001085171 | bam | 137.9 GB | ||
| EGAF00001085172 | bai | 14.0 MB | ||
| EGAF00001085173 | xml.gz | 5.9 kB | ||
| EGAF00001085174 | bam | 120.1 GB | ||
| EGAF00001085175 | bai | 12.4 MB | ||
| EGAF00001085176 | xml.gz | 9.4 kB | ||
| EGAF00001085177 | bam | 116.9 GB | ||
| EGAF00001085178 | bai | 16.7 MB | ||
| EGAF00001085179 | xml.gz | 11.2 kB | ||
| EGAF00001085180 | bam | 141.6 GB | ||
| EGAF00001085181 | bai | 19.3 MB | ||
| EGAF00001085182 | xml.gz | 6.2 kB | ||
| EGAF00001085183 | bam | 115.9 GB | ||
| EGAF00001085184 | bai | 14.5 MB | ||
| EGAF00001085185 | xml.gz | 5.8 kB | ||
| EGAF00001085186 | bam | 122.3 GB | ||
| EGAF00001085187 | bai | 22.8 MB | ||
| EGAF00001085188 | xml.gz | 8.9 kB | ||
| EGAF00001149787 | bam | 130.5 GB | ||
| EGAF00001149788 | bai | 20.5 MB | ||
| EGAF00001149789 | xml.gz | 6.1 kB | ||
| EGAF00001149790 | bam | 148.2 GB | ||
| EGAF00001149791 | bai | 17.2 MB | ||
| EGAF00001149792 | xml.gz | 6.1 kB | ||
| EGAF00001149793 | bam | 123.2 GB | ||
| EGAF00001149794 | bai | 15.9 MB | ||
| EGAF00001149795 | xml.gz | 6.5 kB | ||
| EGAF00001149796 | bam | 128.8 GB | ||
| EGAF00001149797 | bai | 22.2 MB | ||
| EGAF00001149798 | xml.gz | 9.0 kB | ||
| EGAF00001149799 | bam | 142.6 GB | ||
| EGAF00001149800 | bai | 23.0 MB | ||
| EGAF00001149801 | xml.gz | 8.7 kB | ||
| EGAF00001149802 | bam | 170.9 GB | ||
| EGAF00001149803 | bai | 25.2 MB | ||
| EGAF00001149804 | xml.gz | 9.2 kB | ||
| EGAF00001149808 | bam | 109.8 GB | ||
| EGAF00001149809 | bai | 20.0 MB | ||
| EGAF00001149810 | xml.gz | 7.8 kB | ||
| EGAF00001149811 | bam | 130.9 GB | ||
| EGAF00001149812 | bai | 18.4 MB | ||
| EGAF00001149813 | xml.gz | 11.3 kB | ||
| EGAF00001149814 | bam | 101.6 GB | ||
| EGAF00001149815 | bai | 16.4 MB | ||
| EGAF00001149816 | xml.gz | 8.9 kB | ||
| EGAF00001149817 | bam | 94.2 GB | ||
| EGAF00001149818 | bai | 14.0 MB | ||
| EGAF00001149819 | xml.gz | 5.9 kB | ||
| EGAF00001149820 | bam | 124.9 GB | ||
| EGAF00001149821 | bai | 15.3 MB | ||
| EGAF00001149822 | xml.gz | 6.4 kB | ||
| EGAF00001149823 | bam | 145.4 GB | ||
| EGAF00001149824 | bai | 25.2 MB | ||
| EGAF00001149825 | xml.gz | 9.5 kB | ||
| EGAF00001149826 | bam | 187.1 GB | ||
| EGAF00001149827 | bai | 20.8 MB | ||
| EGAF00001149828 | xml.gz | 6.1 kB | ||
| EGAF00001149829 | bam | 160.7 GB | ||
| EGAF00001149830 | bai | 22.2 MB | ||
| EGAF00001149831 | xml.gz | 9.3 kB | ||
| EGAF00001149832 | bam | 652.2 GB | ||
| EGAF00001149833 | bai | 69.7 MB | ||
| EGAF00001149834 | xml.gz | 9.9 kB | ||
| EGAF00001149835 | bam | 156.2 GB | ||
| EGAF00001149836 | bai | 13.7 MB | ||
| EGAF00001149837 | xml.gz | 10.2 kB | ||
| EGAF00001149838 | bam | 148.3 GB | ||
| EGAF00001149839 | bai | 25.5 MB | ||
| EGAF00001149840 | xml.gz | 9.7 kB | ||
| EGAF00001149841 | bam | 182.8 GB | ||
| EGAF00001149842 | bai | 18.8 MB | ||
| EGAF00001149843 | xml.gz | 5.8 kB | ||
| EGAF00001149904 | bam | 150.9 GB | ||
| EGAF00001149905 | bai | 17.2 MB | ||
| EGAF00001149906 | xml.gz | 8.4 kB | ||
| EGAF00001149907 | bam | 136.9 GB | ||
| EGAF00001149908 | bai | 18.6 MB | ||
| EGAF00001149909 | xml.gz | 6.5 kB | ||
| EGAF00001149910 | bam | 150.5 GB | ||
| EGAF00001149911 | bai | 25.8 MB | ||
| EGAF00001149912 | xml.gz | 9.2 kB | ||
| EGAF00001149913 | bam | 137.2 GB | ||
| EGAF00001149914 | bai | 18.9 MB | ||
| EGAF00001149915 | xml.gz | 7.3 kB | ||
| EGAF00001149916 | bam | 134.4 GB | ||
| EGAF00001149917 | bai | 16.8 MB | ||
| EGAF00001149918 | xml.gz | 5.9 kB | ||
| EGAF00001149919 | bam | 121.6 GB | ||
| EGAF00001149920 | bai | 18.4 MB | ||
| EGAF00001149921 | xml.gz | 5.5 kB | ||
| EGAF00001149922 | bam | 114.4 GB | ||
| EGAF00001149923 | bai | 17.7 MB | ||
| EGAF00001149924 | xml.gz | 5.9 kB | ||
| EGAF00001149925 | bam | 108.8 GB | ||
| EGAF00001149926 | bai | 11.8 MB | ||
| EGAF00001149927 | xml.gz | 9.4 kB | ||
| EGAF00001149928 | bam | 123.0 GB | ||
| EGAF00001149929 | bai | 19.8 MB | ||
| EGAF00001149930 | xml.gz | 7.9 kB | ||
| EGAF00001149931 | bam | 100.3 GB | ||
| EGAF00001149932 | bai | 14.5 MB | ||
| EGAF00001149933 | xml.gz | 5.9 kB | ||
| EGAF00001149934 | bam | 126.7 GB | ||
| EGAF00001149935 | bai | 20.6 MB | ||
| EGAF00001149936 | xml.gz | 7.9 kB | ||
| EGAF00001149937 | bam | 177.4 GB | ||
| EGAF00001149938 | bai | 17.2 MB | ||
| EGAF00001149939 | xml.gz | 5.8 kB | ||
| EGAF00001149940 | bam | 132.3 GB | ||
| EGAF00001149941 | bai | 12.6 MB | ||
| EGAF00001149942 | xml.gz | 9.5 kB | ||
| EGAF00001149943 | bam | 213.0 GB | ||
| EGAF00001149944 | bai | 22.2 MB | ||
| EGAF00001149945 | xml.gz | 5.6 kB | ||
| EGAF00001149946 | bam | 97.6 GB | ||
| EGAF00001149947 | bai | 21.5 MB | ||
| EGAF00001149948 | xml.gz | 8.9 kB | ||
| EGAF00001149949 | bam | 150.0 GB | ||
| EGAF00001149950 | bai | 19.7 MB | ||
| EGAF00001149951 | xml.gz | 6.8 kB | ||
| EGAF00001149952 | bam | 158.7 GB | ||
| EGAF00001149953 | bai | 27.0 MB | ||
| EGAF00001149954 | xml.gz | 9.3 kB | ||
| EGAF00001149955 | bam | 156.1 GB | ||
| EGAF00001149956 | bai | 15.8 MB | ||
| EGAF00001149957 | xml.gz | 5.4 kB | ||
| EGAF00001149958 | bam | 156.9 GB | ||
| EGAF00001149959 | bai | 18.6 MB | ||
| EGAF00001149960 | xml.gz | 6.2 kB | ||
| 270 Files (12.5 TB) | ||||