ICGC PCAWG Dataset: ORCA-IN_PCAWG_WGS_BWA
ICGC PCAWG Dataset for WGS BAM aligned using BWA MEM. Project: ORCA-IN.
- 31/05/2016
- 26 samples
- DAC: EGAC00001000010
- HMB DUO:0000006 (version: 2021-02-23)health or medical or biomedical researchThis data use permission indicates that use is allowed for health/medical/biomedical purposes; does not include the study of population origins or ancestry.
- NPUNCU DUO:0000018 (version: 2021-02-23)not for profit, non commercial use onlyThis data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.
- PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
- GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.
ICGC Data Access
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00001073688 | bam | 92.3 GB | ||
| EGAF00001073689 | bai | 11.8 MB | ||
| EGAF00001073690 | xml.gz | 7.4 kB | ||
| EGAF00001073691 | bam | 89.0 GB | ||
| EGAF00001073692 | bai | 11.8 MB | ||
| EGAF00001073693 | xml.gz | 8.1 kB | ||
| EGAF00001073694 | bam | 95.4 GB | ||
| EGAF00001073695 | bai | 11.5 MB | ||
| EGAF00001073696 | xml.gz | 8.1 kB | ||
| EGAF00001073697 | bam | 134.8 GB | ||
| EGAF00001073698 | bai | 14.8 MB | ||
| EGAF00001073699 | xml.gz | 9.7 kB | ||
| EGAF00001073700 | bam | 183.2 GB | ||
| EGAF00001073701 | bai | 16.3 MB | ||
| EGAF00001073702 | xml.gz | 7.5 kB | ||
| EGAF00001073703 | bam | 88.3 GB | ||
| EGAF00001073704 | bai | 11.4 MB | ||
| EGAF00001073705 | xml.gz | 7.4 kB | ||
| EGAF00001073706 | bam | 97.0 GB | ||
| EGAF00001073707 | bai | 11.6 MB | ||
| EGAF00001073708 | xml.gz | 6.8 kB | ||
| EGAF00001073709 | bam | 92.3 GB | ||
| EGAF00001073710 | bai | 11.6 MB | ||
| EGAF00001073711 | xml.gz | 8.1 kB | ||
| EGAF00001073712 | bam | 90.0 GB | ||
| EGAF00001073713 | bai | 11.3 MB | ||
| EGAF00001073714 | xml.gz | 6.8 kB | ||
| EGAF00001073715 | bam | 188.5 GB | ||
| EGAF00001073716 | bai | 15.4 MB | ||
| EGAF00001073717 | xml.gz | 7.5 kB | ||
| EGAF00001073718 | bam | 109.8 GB | ||
| EGAF00001073719 | bai | 12.0 MB | ||
| EGAF00001073720 | xml.gz | 6.8 kB | ||
| EGAF00001073721 | bam | 90.2 GB | ||
| EGAF00001073722 | bai | 11.3 MB | ||
| EGAF00001073723 | xml.gz | 5.8 kB | ||
| EGAF00001073724 | bam | 92.1 GB | ||
| EGAF00001073725 | bai | 11.4 MB | ||
| EGAF00001073726 | xml.gz | 5.2 kB | ||
| EGAF00001073727 | bam | 170.4 GB | ||
| EGAF00001073728 | bai | 13.9 MB | ||
| EGAF00001073729 | xml.gz | 9.8 kB | ||
| EGAF00001149745 | bam | 92.5 GB | ||
| EGAF00001149746 | bai | 11.8 MB | ||
| EGAF00001149747 | xml.gz | 8.1 kB | ||
| EGAF00001149748 | bam | 146.9 GB | ||
| EGAF00001149749 | bai | 14.1 MB | ||
| EGAF00001149750 | xml.gz | 9.8 kB | ||
| EGAF00001149751 | bam | 156.2 GB | ||
| EGAF00001149752 | bai | 14.9 MB | ||
| EGAF00001149753 | xml.gz | 5.9 kB | ||
| EGAF00001149754 | bam | 176.5 GB | ||
| EGAF00001149755 | bai | 16.4 MB | ||
| EGAF00001149756 | xml.gz | 7.7 kB | ||
| EGAF00001149757 | bam | 175.4 GB | ||
| EGAF00001149758 | bai | 16.1 MB | ||
| EGAF00001149759 | xml.gz | 5.9 kB | ||
| EGAF00001149760 | bam | 158.1 GB | ||
| EGAF00001149761 | bai | 14.8 MB | ||
| EGAF00001149762 | xml.gz | 9.8 kB | ||
| EGAF00001149862 | bam | 95.6 GB | ||
| EGAF00001149863 | bai | 11.8 MB | ||
| EGAF00001149864 | xml.gz | 6.8 kB | ||
| EGAF00001149865 | bam | 172.5 GB | ||
| EGAF00001149866 | bai | 16.8 MB | ||
| EGAF00001149867 | xml.gz | 10.0 kB | ||
| EGAF00001149868 | bam | 161.5 GB | ||
| EGAF00001149869 | bai | 15.1 MB | ||
| EGAF00001149870 | xml.gz | 5.5 kB | ||
| EGAF00001149871 | bam | 95.3 GB | ||
| EGAF00001149872 | bai | 11.2 MB | ||
| EGAF00001149873 | xml.gz | 7.5 kB | ||
| EGAF00001149874 | bam | 153.9 GB | ||
| EGAF00001149875 | bai | 15.3 MB | ||
| EGAF00001149876 | xml.gz | 5.6 kB | ||
| EGAF00001149877 | bam | 164.5 GB | ||
| EGAF00001149878 | bai | 13.9 MB | ||
| EGAF00001149879 | xml.gz | 9.8 kB | ||
| 78 Files (3.4 TB) | ||||