RNA-seq data from 195 pediatric BCP-ALL cases

RNA-seq data from 195 pediatric BCP-ALL cases. Alignment: TopHat 2.0.7. Reference genome: hg19.

05/06/2016
195 samples
DAC: EGAC00001000481
Technology: Illumina HiScanSQ

Access Policy1 Study Files

Metadata

Request Access

Data access policy for BCP-ALL_RNA-seq_Lund-2016

The data access agreement provided by the data access committee stipulates that in order to get access to the deposited genetic data, the user will need to agree to: • use the data only for academic research purposes; • cite the original article in any resulting publication; • protect the confidentiality of the data; • provide appropriate data security; • not attempt to identify individual participants from whom data were obtained; • not redistribute the data, or any subset or derivative, that could be used to identify the research participant

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
	RNA-sequencing data from 195 B-cell precursor acute lymphoblastic leukemias and mate pair whole genome sequencing data from 15 B-cell precursor acute lymphoblastic leukemias	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00001170324	fastq.bz2	1.1 GB
EGAF00001170325	fastq.bz2	1.1 GB
EGAF00001170326	fastq.bz2	860.3 MB
EGAF00001170327	fastq.bz2	869.9 MB
EGAF00001170328	fastq.bz2	739.2 MB
EGAF00001170329	fastq.bz2	750.8 MB
EGAF00001170330	fastq.bz2	827.7 MB
EGAF00001170331	fastq.bz2	835.1 MB
EGAF00001170332	fastq.bz2	875.6 MB
EGAF00001170333	fastq.bz2	880.9 MB
EGAF00001170334	fastq.bz2	875.5 MB
EGAF00001170335	fastq.bz2	883.5 MB
EGAF00001170336	fastq.bz2	991.2 MB
EGAF00001170337	fastq.bz2	1.0 GB
EGAF00001170338	fastq.bz2	956.9 MB
EGAF00001170339	fastq.bz2	976.3 MB
EGAF00001170340	fastq.bz2	821.6 MB
EGAF00001170341	fastq.bz2	837.8 MB
EGAF00001170342	fastq.bz2	952.6 MB
EGAF00001170343	fastq.bz2	962.4 MB
EGAF00001170344	fastq.bz2	925.5 MB
EGAF00001170345	fastq.bz2	932.9 MB
EGAF00001170346	fastq.bz2	1.1 GB
EGAF00001170347	fastq.bz2	1.2 GB
EGAF00001170367	fastq.bz2	1.0 GB
EGAF00001170368	fastq.bz2	1.0 GB
EGAF00001170369	fastq.bz2	975.2 MB
EGAF00001170370	fastq.bz2	996.6 MB
EGAF00001170371	fastq.bz2	876.7 MB
EGAF00001170372	fastq.bz2	896.2 MB
EGAF00001170373	fastq.bz2	863.9 MB
EGAF00001170374	fastq.bz2	656.2 MB
EGAF00001170375	fastq.bz2	880.7 MB
EGAF00001170376	fastq.bz2	890.7 MB
EGAF00001170377	fastq.bz2	831.5 MB
EGAF00001170378	fastq.bz2	855.5 MB
EGAF00001170379	fastq.bz2	1.1 GB
EGAF00001170380	fastq.bz2	873.9 MB
EGAF00001170381	fastq.bz2	1.4 GB
EGAF00001170382	fastq.bz2	1.1 GB
EGAF00001170383	fastq.bz2	899.0 MB
EGAF00001170384	fastq.bz2	897.2 MB
EGAF00001170385	fastq.bz2	950.9 MB
EGAF00001170386	fastq.bz2	960.7 MB
EGAF00001170387	fastq.bz2	498.5 MB
EGAF00001170388	fastq.bz2	504.0 MB
EGAF00001170389	fastq.bz2	1.1 GB
EGAF00001170390	fastq.bz2	811.0 MB
EGAF00001170391	fastq.bz2	857.6 MB
EGAF00001170392	fastq.bz2	876.0 MB
EGAF00001170393	fastq.bz2	1.1 GB
EGAF00001170394	fastq.bz2	1.1 GB
EGAF00001170395	fastq.bz2	722.8 MB
EGAF00001170396	fastq.bz2	744.4 MB
EGAF00001170397	fastq.bz2	1.6 GB
EGAF00001170398	fastq.bz2	1.6 GB
EGAF00001170436	fastq.bz2	1.3 GB
EGAF00001170437	fastq.bz2	1.4 GB
EGAF00001170438	fastq.bz2	917.0 MB
EGAF00001170439	fastq.bz2	931.9 MB
EGAF00001170440	fastq.bz2	958.6 MB
EGAF00001170441	fastq.bz2	980.1 MB
EGAF00001170442	fastq.bz2	1.2 GB
EGAF00001170443	fastq.bz2	1.3 GB
EGAF00001170444	fastq.bz2	1.1 GB
EGAF00001170445	fastq.bz2	1.1 GB
EGAF00001170446	fastq.bz2	1.1 GB
EGAF00001170447	fastq.bz2	1.1 GB
EGAF00001170448	fastq.bz2	754.2 MB
EGAF00001170449	fastq.bz2	753.4 MB
EGAF00001170450	fastq.bz2	1.1 GB
EGAF00001170451	fastq.bz2	913.3 MB
EGAF00001170452	fastq.bz2	635.1 MB
EGAF00001170453	fastq.bz2	655.1 MB
EGAF00001170454	fastq.bz2	959.9 MB
EGAF00001170455	fastq.bz2	978.0 MB
EGAF00001170456	fastq.bz2	986.2 MB
EGAF00001170457	fastq.bz2	1.0 GB
EGAF00001170458	fastq.bz2	1.0 GB
EGAF00001170459	fastq.bz2	1.1 GB
EGAF00001170460	fastq.bz2	1.1 GB
EGAF00001170461	fastq.bz2	875.2 MB
EGAF00001170462	fastq.bz2	784.9 MB
EGAF00001170463	fastq.bz2	620.8 MB
EGAF00001170464	fastq.bz2	1.0 GB
EGAF00001170465	fastq.bz2	1.0 GB
EGAF00001170466	fastq.bz2	883.4 MB
EGAF00001170467	fastq.bz2	897.0 MB
EGAF00001170497	fastq.bz2	1.1 GB
EGAF00001170498	fastq.bz2	884.2 MB
EGAF00001170499	fastq.bz2	1.0 GB
EGAF00001170500	fastq.bz2	1.0 GB
EGAF00001170501	fastq.bz2	864.9 MB
EGAF00001170502	fastq.bz2	888.2 MB
EGAF00001170503	fastq.bz2	911.3 MB
EGAF00001170504	fastq.bz2	928.7 MB
EGAF00001170505	fastq.bz2	808.9 MB
EGAF00001170506	fastq.bz2	823.2 MB
EGAF00001170507	fastq.bz2	749.6 MB
EGAF00001170508	fastq.bz2	578.0 MB
EGAF00001170509	fastq.bz2	944.5 MB
EGAF00001170510	fastq.bz2	760.5 MB
EGAF00001170511	fastq.bz2	1.0 GB
EGAF00001170512	fastq.bz2	1.0 GB
EGAF00001170513	fastq.bz2	770.2 MB
EGAF00001170514	fastq.bz2	787.1 MB
EGAF00001170515	fastq.bz2	1.1 GB
EGAF00001170516	fastq.bz2	1.1 GB
EGAF00001170517	fastq.bz2	1.2 GB
EGAF00001170518	fastq.bz2	1.3 GB
EGAF00001170519	fastq.bz2	856.9 MB
EGAF00001170520	fastq.bz2	878.9 MB
EGAF00001170521	fastq.bz2	1.2 GB
EGAF00001170522	fastq.bz2	992.2 MB
EGAF00001170523	fastq.bz2	1.0 GB
EGAF00001170524	fastq.bz2	811.3 MB
EGAF00001170525	fastq.bz2	1.2 GB
EGAF00001170526	fastq.bz2	1.2 GB
EGAF00001170527	fastq.bz2	1.2 GB
EGAF00001170528	fastq.bz2	929.9 MB
EGAF00001170549	fastq.bz2	787.3 MB
EGAF00001170550	fastq.bz2	800.9 MB
EGAF00001170551	fastq.bz2	1.0 GB
EGAF00001170552	fastq.bz2	1.0 GB
EGAF00001170553	fastq.bz2	839.4 MB
EGAF00001170554	fastq.bz2	860.8 MB
EGAF00001170555	fastq.bz2	766.4 MB
EGAF00001170556	fastq.bz2	774.6 MB
EGAF00001170557	fastq.bz2	810.5 MB
EGAF00001170558	fastq.bz2	832.0 MB
EGAF00001170559	fastq.bz2	717.4 MB
EGAF00001170560	fastq.bz2	733.7 MB
EGAF00001170561	fastq.bz2	914.5 MB
EGAF00001170562	fastq.bz2	935.3 MB
EGAF00001170563	fastq.bz2	732.1 MB
EGAF00001170564	fastq.bz2	754.1 MB
EGAF00001170565	fastq.bz2	929.2 MB
EGAF00001170566	fastq.bz2	942.7 MB
EGAF00001170567	fastq.bz2	1.1 GB
EGAF00001170568	fastq.bz2	1.1 GB
EGAF00001170569	fastq.bz2	825.6 MB
EGAF00001170570	fastq.bz2	843.9 MB
EGAF00001170571	fastq.bz2	1.1 GB
EGAF00001170572	fastq.bz2	1.1 GB
EGAF00001170573	fastq.bz2	1.1 GB
EGAF00001170574	fastq.bz2	1.1 GB
EGAF00001170575	fastq.bz2	927.2 MB
EGAF00001170576	fastq.bz2	940.7 MB
EGAF00001170577	fastq.bz2	954.5 MB
EGAF00001170578	fastq.bz2	979.2 MB
EGAF00001170579	fastq.bz2	933.8 MB
EGAF00001170580	fastq.bz2	955.8 MB
EGAF00001170583	fastq.bz2	1.1 GB
EGAF00001170584	fastq.bz2	1.1 GB
EGAF00001170585	fastq.bz2	921.4 MB
EGAF00001170586	fastq.bz2	938.9 MB
EGAF00001170587	fastq.bz2	1.3 GB
EGAF00001170588	fastq.bz2	1.0 GB
EGAF00001170589	fastq.bz2	1.1 GB
EGAF00001170590	fastq.bz2	868.7 MB
EGAF00001170591	fastq.bz2	878.7 MB
EGAF00001170592	fastq.bz2	898.7 MB
EGAF00001170593	fastq.bz2	1.1 GB
EGAF00001170594	fastq.bz2	1.1 GB
EGAF00001170595	fastq.bz2	1.2 GB
EGAF00001170596	fastq.bz2	1.2 GB
EGAF00001170597	fastq.bz2	1.1 GB
EGAF00001170598	fastq.bz2	1.1 GB
EGAF00001170599	fastq.bz2	1.0 GB
EGAF00001170600	fastq.bz2	1.0 GB
EGAF00001170601	fastq.bz2	798.3 MB
EGAF00001170602	fastq.bz2	808.0 MB
EGAF00001170603	fastq.bz2	1.0 GB
EGAF00001170604	fastq.bz2	1.0 GB
EGAF00001170605	fastq.bz2	1.1 GB
EGAF00001170606	fastq.bz2	1.1 GB
EGAF00001170607	fastq.bz2	1.3 GB
EGAF00001170608	fastq.bz2	1.3 GB
EGAF00001170609	fastq.bz2	1.3 GB
EGAF00001170610	fastq.bz2	1.0 GB
EGAF00001170611	fastq.bz2	755.1 MB
EGAF00001170612	fastq.bz2	764.8 MB
EGAF00001170613	fastq.bz2	562.2 MB
EGAF00001170614	fastq.bz2	425.7 MB
EGAF00001170615	fastq.bz2	695.2 MB
EGAF00001170616	fastq.bz2	714.1 MB
EGAF00001170617	fastq.bz2	1.1 GB
EGAF00001170618	fastq.bz2	1.1 GB
EGAF00001170619	fastq.bz2	681.5 MB
EGAF00001170620	fastq.bz2	698.1 MB
EGAF00001170621	fastq.bz2	1.0 GB
EGAF00001170622	fastq.bz2	1.0 GB
EGAF00001170623	fastq.bz2	767.0 MB
EGAF00001170624	fastq.bz2	784.9 MB
EGAF00001170625	fastq.bz2	508.5 MB
EGAF00001170626	fastq.bz2	521.3 MB
EGAF00001170627	fastq.bz2	1.0 GB
EGAF00001170628	fastq.bz2	1.0 GB
EGAF00001170629	fastq.bz2	1.0 GB
EGAF00001170630	fastq.bz2	1.1 GB
EGAF00001170631	fastq.bz2	1.1 GB
EGAF00001170632	fastq.bz2	1.1 GB
EGAF00001170633	fastq.bz2	831.0 MB
EGAF00001170634	fastq.bz2	849.5 MB
EGAF00001170635	fastq.bz2	756.7 MB
EGAF00001170636	fastq.bz2	768.3 MB
EGAF00001170637	fastq.bz2	568.9 MB
EGAF00001170638	fastq.bz2	581.7 MB
EGAF00001170639	fastq.bz2	680.3 MB
EGAF00001170640	fastq.bz2	698.6 MB
EGAF00001170641	fastq.bz2	688.1 MB
EGAF00001170642	fastq.bz2	704.2 MB
EGAF00001170643	fastq.bz2	862.8 MB
EGAF00001170644	fastq.bz2	875.1 MB
EGAF00001170645	fastq.bz2	988.0 MB
EGAF00001170646	fastq.bz2	1.0 GB
EGAF00001170647	fastq.bz2	801.1 MB
EGAF00001170648	fastq.bz2	818.9 MB
EGAF00001170649	fastq.bz2	899.0 MB
EGAF00001170650	fastq.bz2	917.8 MB
EGAF00001170651	fastq.bz2	992.0 MB
EGAF00001170652	fastq.bz2	1.0 GB
EGAF00001170653	fastq.bz2	809.2 MB
EGAF00001170654	fastq.bz2	824.1 MB
EGAF00001170655	fastq.bz2	943.1 MB
EGAF00001170656	fastq.bz2	965.7 MB
EGAF00001170657	fastq.bz2	1.2 GB
EGAF00001170658	fastq.bz2	1.3 GB
EGAF00001170659	fastq.bz2	1.0 GB
EGAF00001170660	fastq.bz2	1.1 GB
EGAF00001170661	fastq.bz2	1.5 GB
EGAF00001170662	fastq.bz2	1.5 GB
EGAF00001170663	fastq.bz2	968.9 MB
EGAF00001170664	fastq.bz2	990.8 MB
EGAF00001170665	fastq.bz2	665.0 MB
EGAF00001170666	fastq.bz2	535.9 MB
EGAF00001170667	fastq.bz2	847.4 MB
EGAF00001170668	fastq.bz2	870.5 MB
EGAF00001170669	fastq.bz2	725.6 MB
EGAF00001170670	fastq.bz2	746.0 MB
EGAF00001170671	fastq.bz2	838.4 MB
EGAF00001170672	fastq.bz2	860.5 MB
EGAF00001170673	fastq.bz2	974.1 MB
EGAF00001170674	fastq.bz2	1.0 GB
EGAF00001170675	fastq.bz2	1.0 GB
EGAF00001170676	fastq.bz2	1.1 GB
EGAF00001170677	fastq.bz2	725.8 MB
EGAF00001170678	fastq.bz2	747.0 MB
EGAF00001170679	fastq.bz2	900.8 MB
EGAF00001170680	fastq.bz2	920.4 MB
EGAF00001170681	fastq.bz2	991.5 MB
EGAF00001170682	fastq.bz2	1.0 GB
EGAF00001170683	fastq.bz2	1.0 GB
EGAF00001170684	fastq.bz2	1.0 GB
EGAF00001170685	fastq.bz2	1.0 GB
EGAF00001170686	fastq.bz2	1.0 GB
EGAF00001170687	fastq.bz2	1.1 GB
EGAF00001170688	fastq.bz2	1.1 GB
EGAF00001170689	fastq.bz2	1.0 GB
EGAF00001170690	fastq.bz2	1.1 GB
EGAF00001170691	fastq.bz2	942.7 MB
EGAF00001170692	fastq.bz2	964.5 MB
EGAF00001170693	fastq.bz2	1.1 GB
EGAF00001170694	fastq.bz2	1.2 GB
EGAF00001170695	fastq.bz2	699.9 MB
EGAF00001170696	fastq.bz2	708.8 MB
EGAF00001170697	fastq.bz2	902.9 MB
EGAF00001170698	fastq.bz2	926.2 MB
EGAF00001170699	fastq.bz2	883.0 MB
EGAF00001170700	fastq.bz2	911.2 MB
EGAF00001170701	fastq.bz2	1.0 GB
EGAF00001170702	fastq.bz2	1.0 GB
EGAF00001170703	fastq.bz2	1.1 GB
EGAF00001170704	fastq.bz2	1.1 GB
EGAF00001170705	fastq.bz2	1.0 GB
EGAF00001170706	fastq.bz2	1.0 GB
EGAF00001170707	fastq.bz2	897.6 MB
EGAF00001170708	fastq.bz2	912.3 MB
EGAF00001170709	fastq.bz2	903.0 MB
EGAF00001170710	fastq.bz2	926.8 MB
EGAF00001170711	fastq.bz2	1.1 GB
EGAF00001170712	fastq.bz2	1.2 GB
EGAF00001170713	fastq.bz2	1.1 GB
EGAF00001170714	fastq.bz2	1.1 GB
EGAF00001170715	fastq.bz2	798.7 MB
EGAF00001170716	fastq.bz2	815.6 MB
EGAF00001170717	fastq.bz2	826.1 MB
EGAF00001170718	fastq.bz2	845.7 MB
EGAF00001170719	fastq.bz2	1.0 GB
EGAF00001170720	fastq.bz2	1.0 GB
EGAF00001170721	fastq.bz2	980.3 MB
EGAF00001170722	fastq.bz2	1.0 GB
EGAF00001170723	fastq.bz2	884.8 MB
EGAF00001170724	fastq.bz2	903.9 MB
EGAF00001170725	fastq.bz2	1.1 GB
EGAF00001170726	fastq.bz2	1.1 GB
EGAF00001170727	fastq.bz2	988.4 MB
EGAF00001170728	fastq.bz2	1.0 GB
EGAF00001170729	fastq.bz2	1.2 GB
EGAF00001170730	fastq.bz2	1.2 GB
EGAF00001170731	fastq.bz2	960.1 MB
EGAF00001170732	fastq.bz2	984.3 MB
EGAF00001170733	fastq.bz2	905.8 MB
EGAF00001170734	fastq.bz2	925.5 MB
EGAF00001170735	fastq.bz2	1.4 GB
EGAF00001170736	fastq.bz2	1.4 GB
EGAF00001170737	fastq.bz2	886.7 MB
EGAF00001170738	fastq.bz2	909.6 MB
EGAF00001170739	fastq.bz2	1.0 GB
EGAF00001170740	fastq.bz2	1.0 GB
EGAF00001170741	fastq.bz2	865.5 MB
EGAF00001170742	fastq.bz2	878.0 MB
EGAF00001170743	fastq.bz2	992.3 MB
EGAF00001170744	fastq.bz2	1.0 GB
EGAF00001170745	fastq.bz2	993.6 MB
EGAF00001170746	fastq.bz2	1.0 GB
EGAF00001170747	fastq.bz2	1.1 GB
EGAF00001170748	fastq.bz2	1.1 GB
EGAF00001170749	fastq.bz2	1.2 GB
EGAF00001170750	fastq.bz2	1.2 GB
EGAF00001170751	fastq.bz2	841.8 MB
EGAF00001170752	fastq.bz2	860.5 MB
EGAF00001170753	fastq.bz2	1.0 GB
EGAF00001170754	fastq.bz2	1.0 GB
EGAF00001170755	fastq.bz2	983.2 MB
EGAF00001170756	fastq.bz2	1.0 GB
EGAF00001170757	fastq.bz2	734.1 MB
EGAF00001170758	fastq.bz2	752.1 MB
EGAF00001170759	fastq.bz2	1.1 GB
EGAF00001170760	fastq.bz2	1.2 GB
EGAF00001170761	fastq.bz2	836.0 MB
EGAF00001170762	fastq.bz2	857.3 MB
EGAF00001170763	fastq.bz2	1.8 GB
EGAF00001170764	fastq.bz2	1.9 GB
EGAF00001170765	fastq.bz2	847.3 MB
EGAF00001170766	fastq.bz2	862.5 MB
EGAF00001170767	fastq.bz2	739.6 MB
EGAF00001170768	fastq.bz2	753.9 MB
EGAF00001170769	fastq.bz2	932.9 MB
EGAF00001170770	fastq.bz2	949.9 MB
EGAF00001170771	fastq.bz2	1.4 GB
EGAF00001170772	fastq.bz2	1.5 GB
EGAF00001170773	fastq.bz2	1.4 GB
EGAF00001170774	fastq.bz2	1.4 GB
EGAF00001170775	fastq.bz2	802.2 MB
EGAF00001170776	fastq.bz2	826.2 MB
EGAF00001170777	fastq.bz2	830.6 MB
EGAF00001170778	fastq.bz2	851.9 MB
EGAF00001170779	fastq.bz2	905.5 MB
EGAF00001170780	fastq.bz2	931.3 MB
EGAF00001170781	fastq.bz2	1.0 GB
EGAF00001170782	fastq.bz2	1.0 GB
EGAF00001170783	fastq.bz2	941.2 MB
EGAF00001170784	fastq.bz2	963.1 MB
EGAF00001170785	fastq.bz2	722.9 MB
EGAF00001170786	fastq.bz2	744.2 MB
EGAF00001170787	fastq.bz2	830.3 MB
EGAF00001170788	fastq.bz2	855.0 MB
EGAF00001170789	fastq.bz2	831.4 MB
EGAF00001170790	fastq.bz2	855.4 MB
EGAF00001170791	fastq.bz2	755.1 MB
EGAF00001170792	fastq.bz2	768.8 MB
EGAF00001170793	fastq.bz2	1.2 GB
EGAF00001170794	fastq.bz2	1.2 GB
EGAF00001170795	fastq.bz2	723.2 MB
EGAF00001170796	fastq.bz2	731.7 MB
EGAF00001170797	fastq.bz2	885.7 MB
EGAF00001170798	fastq.bz2	892.7 MB
EGAF00001170799	fastq.bz2	888.9 MB
EGAF00001170800	fastq.bz2	897.8 MB
EGAF00001170801	fastq.bz2	1.0 GB
EGAF00001170802	fastq.bz2	1.1 GB
EGAF00001170803	fastq.bz2	901.5 MB
EGAF00001170804	fastq.bz2	919.3 MB
EGAF00001170805	fastq.bz2	824.7 MB
EGAF00001170806	fastq.bz2	840.1 MB
EGAF00001170807	fastq.bz2	1.2 GB
EGAF00001170808	fastq.bz2	1.2 GB
EGAF00001170809	fastq.bz2	1.0 GB
EGAF00001170810	fastq.bz2	1.1 GB
EGAF00001170811	fastq.bz2	704.5 MB
EGAF00001170812	fastq.bz2	719.1 MB
EGAF00001170813	fastq.bz2	873.2 MB
EGAF00001170814	fastq.bz2	892.5 MB
EGAF00001170815	fastq.bz2	908.6 MB
EGAF00001170816	fastq.bz2	916.6 MB
EGAF00001170817	fastq.bz2	576.2 MB
EGAF00001170818	fastq.bz2	573.2 MB
EGAF00001170819	fastq.bz2	989.4 MB
EGAF00001170820	fastq.bz2	1.0 GB
390 Files (372.9 GB)