PRDM9 loss of function follow up from Born-in-Bradford Autozygosity sequencing
In the autozygosity exome sequencing of Born-in-Bradford samples of Pakistani origin there is a mother who is homozygous for an apparent truncating stop codon in PRDM9, the gene responsible for localising recombination during meiosis. We plan to deep sequence mother and child with X10, and physically phase the mother with PacBio sequencing. We will use this data to identify recombination locations, and test whether these are consistent with the known fine scale recombination map. Data Access is controlled by the Wellcome Trust Sanger Institute DAC and the Born In Bradford Executive Group.
- 24/04/2017
- 2 samples
- DAC: EGAC00001000205
- Technologies: HiSeq X Ten, Illumina HiSeq 2500
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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Whole Genome Sequencing |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00000922324 | cram | 39.9 GB | ||
| EGAF00000922410 | cram | 41.6 GB | ||
| EGAF00000922411 | cram | 42.2 GB | ||
| EGAF00000922412 | cram | 3.1 GB | ||
| EGAF00000922413 | cram | 3.0 GB | ||
| EGAF00000922414 | cram | 3.1 GB | ||
| EGAF00000922415 | cram | 2.7 GB | ||
| EGAF00000922416 | cram | 2.6 GB | ||
| EGAF00000922417 | cram | 3.2 GB | ||
| EGAF00000922418 | cram | 3.0 GB | ||
| EGAF00000922419 | cram | 3.1 GB | ||
| EGAF00000922420 | cram | 2.9 GB | ||
| EGAF00000922421 | cram | 2.4 GB | ||
| EGAF00000922422 | cram | 3.0 GB | ||
| EGAF00000922423 | cram | 3.1 GB | ||
| EGAF00000922424 | cram | 3.0 GB | ||
| EGAF00000922425 | cram | 2.6 GB | ||
| EGAF00000922426 | cram | 2.5 GB | ||
| EGAF00000922427 | cram | 3.1 GB | ||
| EGAF00000922428 | cram | 3.2 GB | ||
| EGAF00000922429 | cram | 3.3 GB | ||
| EGAF00000922430 | cram | 3.1 GB | ||
| EGAF00000922431 | cram | 2.6 GB | ||
| EGAF00000922432 | cram | 2.5 GB | ||
| EGAF00000922433 | cram | 3.0 GB | ||
| EGAF00000922434 | cram | 2.9 GB | ||
| EGAF00000922435 | cram | 3.1 GB | ||
| EGAF00000922436 | cram | 3.3 GB | ||
| EGAF00000922437 | cram | 3.1 GB | ||
| EGAF00000922438 | cram | 3.0 GB | ||
| EGAF00000922439 | cram | 3.3 GB | ||
| EGAF00000922440 | cram | 3.4 GB | ||
| EGAF00000922441 | cram | 3.2 GB | ||
| EGAF00000922442 | cram | 3.1 GB | ||
| EGAF00000922443 | cram | 2.7 GB | ||
| EGAF00000922444 | cram | 2.6 GB | ||
| EGAF00000922445 | cram | 3.3 GB | ||
| EGAF00000922446 | cram | 3.4 GB | ||
| EGAF00000922447 | cram | 3.2 GB | ||
| EGAF00000922448 | cram | 3.1 GB | ||
| EGAF00000922449 | cram | 3.3 GB | ||
| EGAF00000922450 | cram | 2.6 GB | ||
| EGAF00000922451 | cram | 2.9 GB | ||
| EGAF00000922452 | cram | 3.2 GB | ||
| EGAF00000922453 | cram | 3.3 GB | ||
| EGAF00000922454 | cram | 2.9 GB | ||
| EGAF00000922455 | cram | 3.0 GB | ||
| EGAF00000922456 | cram | 2.6 GB | ||
| EGAF00000922457 | cram | 2.4 GB | ||
| EGAF00000922458 | cram | 3.0 GB | ||
| EGAF00000922459 | cram | 2.9 GB | ||
| 51 Files (266.6 GB) | ||||