Genomic analysis of HPV-positive versus HPV-negative oesophageal adenocarcinoma
Whole exome sequencing was performed to explore the mutational landscape and potential molecular signature of HPV-positive versus HPV-negative OAC. Four hr-HPV-positive and 8 HPV-negative treatment-naive fresh-frozen OAC tissue specimens and matched normal tissue were analysed to identify somatic genomic mutations
- 17/08/2016
- 24 samples
- DAC: EGAC00001000367
The Gastro-Intestinal Viral Oncology Group Genome Data - Data Access Agreement
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001001340 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00000905879 | bam | 15.7 GB | ||
| EGAF00000905880 | bam | 21.3 GB | ||
| EGAF00000905881 | bam | 20.4 GB | ||
| EGAF00000905882 | bam | 19.5 GB | ||
| EGAF00000905883 | bam | 19.4 GB | ||
| EGAF00000905884 | bam | 13.3 GB | ||
| EGAF00000905885 | bam | 15.7 GB | ||
| EGAF00000905886 | bam | 24.9 GB | ||
| EGAF00000905887 | bam | 17.2 GB | ||
| EGAF00000905888 | bam | 13.3 GB | ||
| EGAF00000905889 | bam | 19.8 GB | ||
| EGAF00000905890 | bam | 13.4 GB | ||
| EGAF00000905891 | bam | 12.7 GB | ||
| EGAF00000905892 | bam | 21.4 GB | ||
| EGAF00000905893 | bam | 20.0 GB | ||
| EGAF00000905894 | bam | 15.9 GB | ||
| EGAF00000905895 | bam | 15.8 GB | ||
| EGAF00000905896 | bam | 15.8 GB | ||
| EGAF00000905897 | bam | 17.5 GB | ||
| EGAF00000905898 | bam | 19.9 GB | ||
| EGAF00000905899 | bam | 19.5 GB | ||
| EGAF00000905900 | bam | 16.6 GB | ||
| EGAF00000905901 | bam | 17.3 GB | ||
| EGAF00000905902 | bam | 14.3 GB | ||
| 24 Files (420.5 GB) | ||||