Transcriptome and Exome from longitudinal samples of human glioblastoma
We obtained paired longitudinal specimens from a total of 38 glioblastoma (GBM) patients (34 primary and 4 secondary GBM patients). Treatment-naive initial tumors were available for 35 cases; for the other 3 cases, we used the first available recurrent tumors in lieu of initial tumors. Tumor specimens were subjected to whole-exome sequencing (27 of 38 cases, with the matched normal/blood for 22 of the 27 cases) and transcriptome sequencing (30 of 38 cases).
- 10/07/2015
- 141 samples
- DAC: EGAC00001000272
- Technologies: Illumina HiSeq 2000, Illumina HiSeq 2500
Institute for Refractory Cancer (IRCR) Data Access Policy
IRCR data access policy generally respects the guidelines of NIH genomic data sharing policy (http://gds.nih.gov/PDF/NIH_GDS_Policy.pdf), but can be overridden by consensual decision of DAC in exceptional cases.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001001041 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00000661463 | bam | 4.6 GB | ||
| EGAF00000661464 | bam | 9.1 GB | ||
| EGAF00000661465 | bam | 8.8 GB | ||
| EGAF00000661466 | bam | 7.7 GB | ||
| EGAF00000661467 | bam | 9.7 GB | ||
| EGAF00000661468 | bam | 8.5 GB | ||
| EGAF00000661469 | bam | 8.8 GB | ||
| EGAF00000661470 | bam | 8.8 GB | ||
| EGAF00000661471 | bam | 6.6 GB | ||
| EGAF00000661472 | bam | 5.4 GB | ||
| EGAF00000661473 | bam | 9.4 GB | ||
| EGAF00000661474 | bam | 5.5 GB | ||
| EGAF00000661475 | bam | 6.9 GB | ||
| EGAF00000661476 | bam | 7.6 GB | ||
| EGAF00000661477 | bam | 9.6 GB | ||
| EGAF00000661478 | bam | 6.7 GB | ||
| EGAF00000661479 | bam | 9.1 GB | ||
| EGAF00000661480 | bam | 12.7 GB | ||
| EGAF00000661481 | bam | 7.5 GB | ||
| EGAF00000661482 | bam | 8.2 GB | ||
| EGAF00000661483 | bam | 12.4 GB | ||
| EGAF00000661484 | bam | 11.1 GB | ||
| EGAF00000661485 | bam | 13.9 GB | ||
| EGAF00000661486 | bam | 12.9 GB | ||
| EGAF00000661487 | bam | 7.7 GB | ||
| EGAF00000661488 | bam | 9.3 GB | ||
| EGAF00000661489 | bam | 7.1 GB | ||
| EGAF00000661490 | bam | 5.8 GB | ||
| EGAF00000661491 | bam | 6.2 GB | ||
| EGAF00000661492 | bam | 12.7 GB | ||
| EGAF00000661493 | bam | 13.5 GB | ||
| EGAF00000661494 | bam | 11.0 GB | ||
| EGAF00000661495 | bam | 5.0 GB | ||
| EGAF00000661496 | bam | 4.8 GB | ||
| EGAF00000661497 | bam | 4.9 GB | ||
| EGAF00000661498 | bam | 4.6 GB | ||
| EGAF00000661499 | bam | 6.4 GB | ||
| EGAF00000661500 | bam | 6.0 GB | ||
| EGAF00000661501 | bam | 11.3 GB | ||
| EGAF00000661502 | bam | 8.4 GB | ||
| EGAF00000661503 | bam | 7.3 GB | ||
| EGAF00000661504 | bam | 9.8 GB | ||
| EGAF00000661505 | bam | 8.3 GB | ||
| EGAF00000661506 | bam | 7.6 GB | ||
| EGAF00000661507 | bam | 8.9 GB | ||
| EGAF00000661508 | bam | 9.8 GB | ||
| EGAF00000661509 | bam | 9.2 GB | ||
| EGAF00000661510 | bam | 9.0 GB | ||
| EGAF00000661511 | bam | 8.5 GB | ||
| EGAF00000661512 | bam | 10.8 GB | ||
| EGAF00000661513 | bam | 10.2 GB | ||
| EGAF00000661514 | bam | 9.1 GB | ||
| EGAF00000661515 | bam | 9.4 GB | ||
| EGAF00000661516 | bam | 7.8 GB | ||
| EGAF00000661517 | bam | 8.7 GB | ||
| EGAF00000661518 | bam | 10.2 GB | ||
| EGAF00000661519 | bam | 10.5 GB | ||
| EGAF00000661520 | bam | 9.9 GB | ||
| EGAF00000661521 | bam | 8.9 GB | ||
| EGAF00000661522 | bam | 8.0 GB | ||
| EGAF00000661523 | bam | 9.2 GB | ||
| EGAF00000661524 | bam | 7.6 GB | ||
| EGAF00000661525 | bam | 6.0 GB | ||
| EGAF00000661526 | bam | 9.5 GB | ||
| EGAF00000661527 | bam | 10.2 GB | ||
| EGAF00000661528 | bam | 9.8 GB | ||
| EGAF00000661529 | bam | 9.8 GB | ||
| EGAF00000661530 | bam | 10.1 GB | ||
| EGAF00000661531 | bam | 10.0 GB | ||
| EGAF00000661532 | bam | 5.9 GB | ||
| EGAF00000661533 | bam | 6.4 GB | ||
| EGAF00000661534 | bam | 9.1 GB | ||
| EGAF00000661535 | bam | 8.4 GB | ||
| EGAF00000661536 | bam | 9.3 GB | ||
| EGAF00000661537 | bam | 9.8 GB | ||
| EGAF00000661538 | bam | 7.8 GB | ||
| EGAF00000661539 | bam | 7.3 GB | ||
| EGAF00000661540 | bam | 7.4 GB | ||
| EGAF00000661541 | bam | 6.4 GB | ||
| EGAF00000661542 | bam | 9.1 GB | ||
| EGAF00000661543 | bam | 12.3 GB | ||
| EGAF00000661544 | bam | 8.7 GB | ||
| EGAF00000661545 | bam | 8.7 GB | ||
| EGAF00000661546 | bam | 8.6 GB | ||
| EGAF00000661547 | bam | 6.7 GB | ||
| EGAF00000661548 | bam | 8.8 GB | ||
| EGAF00000661549 | bam | 7.3 GB | ||
| EGAF00000661550 | bam | 8.1 GB | ||
| EGAF00000661551 | bam | 8.1 GB | ||
| EGAF00000661552 | bam | 10.6 GB | ||
| EGAF00000661553 | bam | 6.8 GB | ||
| EGAF00000661554 | bam | 7.3 GB | ||
| EGAF00000661555 | bam | 9.3 GB | ||
| EGAF00000661556 | bam | 5.5 GB | ||
| EGAF00000661557 | bam | 5.4 GB | ||
| EGAF00000661558 | bam | 7.8 GB | ||
| EGAF00000661559 | bam | 9.1 GB | ||
| EGAF00000661560 | bam | 10.6 GB | ||
| EGAF00000661561 | bam | 9.5 GB | ||
| EGAF00000661562 | bam | 10.5 GB | ||
| EGAF00000661563 | bam | 8.3 GB | ||
| EGAF00000661564 | bam | 6.1 GB | ||
| EGAF00000661565 | bam | 4.7 GB | ||
| EGAF00000661566 | bam | 5.1 GB | ||
| EGAF00000661567 | bam | 11.4 GB | ||
| EGAF00000661568 | bam | 8.0 GB | ||
| EGAF00000661569 | bam | 8.9 GB | ||
| EGAF00000661570 | bam | 11.9 GB | ||
| EGAF00000661571 | bam | 8.5 GB | ||
| EGAF00000661572 | bam | 3.8 GB | ||
| EGAF00000661573 | bam | 4.7 GB | ||
| EGAF00000661574 | bam | 4.7 GB | ||
| EGAF00000661575 | bam | 4.9 GB | ||
| EGAF00000661576 | bam | 7.5 GB | ||
| EGAF00000661577 | bam | 5.2 GB | ||
| EGAF00000661578 | bam | 7.3 GB | ||
| EGAF00000661579 | bam | 4.5 GB | ||
| EGAF00000661580 | bam | 4.2 GB | ||
| EGAF00000661581 | bam | 4.6 GB | ||
| EGAF00000661582 | bam | 3.4 GB | ||
| EGAF00000661583 | bam | 6.1 GB | ||
| EGAF00000661584 | bam | 8.5 GB | ||
| EGAF00000661585 | bam | 4.8 GB | ||
| EGAF00000661586 | bam | 4.9 GB | ||
| EGAF00000661587 | bam | 9.2 GB | ||
| EGAF00000661588 | bam | 13.6 GB | ||
| EGAF00000661589 | bam | 6.6 GB | ||
| EGAF00000661590 | bam | 6.6 GB | ||
| EGAF00000661591 | bam | 12.5 GB | ||
| EGAF00000661592 | bam | 9.3 GB | ||
| EGAF00000661593 | bam | 13.4 GB | ||
| EGAF00000661594 | bam | 12.5 GB | ||
| EGAF00000661595 | bam | 10.3 GB | ||
| EGAF00000661596 | bam | 11.6 GB | ||
| EGAF00000661597 | bam | 4.3 GB | ||
| EGAF00000661598 | bam | 4.4 GB | ||
| EGAF00000661599 | bam | 4.8 GB | ||
| EGAF00000661600 | bam | 5.2 GB | ||
| EGAF00000661601 | bam | 12.5 GB | ||
| EGAF00000661602 | bam | 11.4 GB | ||
| EGAF00000661603 | bam | 5.4 GB | ||
| 141 Files (1.2 TB) | ||||