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Whole-exome sequencing of adult T-cell leukemia/lymphoma

Whole-exome sequencing of 81 tumor/normal pairs of adult T-cell leukemia/lymphoma

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Access policy to the data of "Integrated molecular analysis of adult T-cell leukemia/lymphoma"

Department of Pathology and Tumor Biology, Kyoto University Data Access CommitteeDATA ACCESS AGREEMENTThis agreement governs the terms on which access will be granted to the genotype data generated by the Department of Pathology and Tumor Biology, Kyoto University Data Access Committee. In signing this agreement, You are agreeing to be bound by the terms and conditions of access set out in this agreement. For the sake of clarity, the terms of access set out in this agreement apply both to the User and the User’s Institution (as defined below). User Institution and User are referred to within the agreement as “You” and “Your” shall be construed accordingly.Definitions: Project team means the Department of Pathology and Tumor Biology, Kyoto University Data Access Committee, Kyoto, Japan. Data means all genetic data set of patient with adult T-cell leukemia/lymphoma, obtained from the Project team. Data Subject means a person, who has been informed of the purpose for which the Data is held and has given his/her informed consent thereto. User means a researcher whose User Institution has previously completed this Data Access Agreement and has received acknowledgement of its acceptance. Publications means, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research.User Institution means the organisation at which the User is employed, affiliated or enrolled.Terms and Conditions:In signing this Agreement:1.You agree to use the Data only for the advancement of medical research, according to the consent obtained from sample donors. 2.You agree not to use the Data or any part thereof for the creation of products for sale or for any commercial purpose.3.You agree to preserve, at all times, the confidentiality of information and Data pertaining to Data Subjects. In particular, You undertake not to use, or attempt to use the Data to compromise or otherwise infringe the confidentiality of information on Data Subjects and their right to privacy. 4.You agree not to attempt to link the data provided under this agreement to other information or archive data available for the data sets provided, even if access to that data has been formally granted to you, or it is freely available without restriction, without specific permission being sought from the relevent access committees. 5.You agree not to transfer or disclose the Data, in whole or part, or any identifiable material derived from the Data, to others, except as necessary for data/safety monitoring or programme management. Should You wish to share the Data with a collaborator outwith the same Institution, the third party must make a separate application for access to the Data. 6.You agree to use the data for the approved purpose and project described in your application; use of the data for a new purpose or project will require a new application and approval.7.You accept that Data will be reissued from time to time, with suitable versioning. If the reissue is at the request of sample donors and/or other ethical scrutiny, You will destroy earlier versions of the Data. 8.You agree to abide by the terms outlined in the Project team 'Publications Policy' as set out in Schedule 1.9.You agree to acknowledge in any work based in whole or part on the Data, the published paper from which the Data derives, the version of the data, and the role of the Project team. Suitable wording is provided in the Publications Policy given in Schedule 1.10.You accept that the Project team, the original data creators, depositors or copyright holders, or the funders of the Data or any part of the Data supplied:a)bear no legal responsibility for the accuracy or comprehensiveness of the Data; andb)accept no liability for indirect, consequential, or incidental, damages or losses arising from use of the Data, or from the unavailability of, or break in access to, the Data for whatever reason.11.You understand and acknowledge that the Data is protected by copyright and other intellectual property rights, and that duplication, except as reasonably required to carry out Your research with the Data, or sale of all or part of the Data on any media is not permitted. 12.You recognise that nothing in this agreement shall operate to transfer to the User Institution any intellectual property rights relating to the Data. The User Institution has the right to develop intellectual property based on comparisons with their own data. 13.You accept that this agreement will terminate immediately upon any breach of this agreement by You and You will be required to destroy any Data held. 14.You accept that it may be necessary for the Project team or its appointed agent to alter the terms of this agreement from time to time in order to address new concerns. In this event, the Project team or its appointed agent will contact You to inform You of any changes and You agree that Your continued use of the Data shall be dependent on the parties entering into a new version of the Agreement.15.You agree that you will submit a report to the Department of Pathology and Tumor Biology, Kyoto University Data Access Committee, if requested, on completion of the agreed purpose. The Department of Pathology and Tumor Biology, Kyoto University Data Access Committee agrees to treat the report and all information, data, results, and conclusions contained within such report as confidential information belonging to the User Institution.16.You accept that the Data is protected by and subject to international laws and that You are responsible for ensuring compliance with any such applicable law. The Department of Pathology and Tumor Biology, Kyoto University Data Access Committee reserves the right to request and inspect data security and management documentation to ensure the adequacy of data protection measures in countries that have no national laws comparable to that which pertain in the EAA.17.This agreement shall be construed, interpreted and governed by the laws of Japanese and shall be subject to the non-exclusive jurisdiction of the Japanese courts. SCHEDULE 1Publications PolicyAuthors who use data from the project must acknowledge Dr. Seishi Ogawa using the following wording "This study makes use of data generated by the Department of Pathology and Tumor Biology, Kyoto University.” and cite the relevant primary publication.Users should note that the Project team bears no responsibility for the further analysis or interpretation of these data, over and above that published by the Project team. For and on behalf of User:Name ofApplicant(s):____________________________________________________________________________________________________________________________________________________Signature ofApplicant(s):____________________________________________________________________________________________________________________________________________________Date: _____________________________________For and on behalf of User Institution:Signature of Institutional orAdministrativeAuthority: ______________________________________Print name:______________________________________User Institution:______________________________________Date: ¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬¬______________________________________WHEN SUBMITTING THIS DOCUMENT, PLEASE INCLUDE ALL PAGES OF THE AGREEMENT WITH THIS SIGNATURE PAGE

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00000829641 bam 20.9 GB
EGAF00000829642 bam 15.9 GB
EGAF00000829643 bam 11.4 GB
EGAF00000829644 bam 9.7 GB
EGAF00000829645 bam 8.8 GB
EGAF00000829646 bam 14.1 GB
EGAF00000829647 bam 20.1 GB
EGAF00000829648 bam 11.6 GB
EGAF00000829649 bam 11.9 GB
EGAF00000829650 bam 10.7 GB
EGAF00000829651 bam 11.6 GB
EGAF00000829652 bam 11.2 GB
EGAF00000829653 bam 10.8 GB
EGAF00000829654 bam 11.7 GB
EGAF00000829655 bam 11.5 GB
EGAF00000829656 bam 11.7 GB
EGAF00000829657 bam 10.9 GB
EGAF00000829658 bam 11.4 GB
EGAF00000829659 bam 11.6 GB
EGAF00000829660 bam 5.7 GB
EGAF00000829661 bam 13.0 GB
EGAF00000829662 bam 12.5 GB
EGAF00000829663 bam 7.6 GB
EGAF00000829664 bam 10.6 GB
EGAF00000829665 bam 13.1 GB
EGAF00000829666 bam 10.1 GB
EGAF00000829667 bam 10.2 GB
EGAF00000829668 bam 9.9 GB
EGAF00000829669 bam 10.2 GB
EGAF00000829670 bam 10.0 GB
EGAF00000829671 bam 11.3 GB
EGAF00000829672 bam 13.1 GB
EGAF00000829673 bam 9.9 GB
EGAF00000829674 bam 10.1 GB
EGAF00000829675 bam 5.9 GB
EGAF00000829676 bam 9.5 GB
EGAF00000829677 bam 10.1 GB
EGAF00000829678 bam 6.5 GB
EGAF00000829679 bam 10.0 GB
EGAF00000829680 bam 7.4 GB
EGAF00000829681 bam 9.9 GB
EGAF00000829682 bam 8.3 GB
EGAF00000829683 bam 8.1 GB
EGAF00000829684 bam 10.7 GB
EGAF00000829685 bam 6.4 GB
EGAF00000829686 bam 11.3 GB
EGAF00000829687 bam 6.3 GB
EGAF00000829688 bam 11.6 GB
EGAF00000829689 bam 9.0 GB
EGAF00000829690 bam 8.5 GB
EGAF00000829691 bam 8.6 GB
EGAF00000829692 bam 6.7 GB
EGAF00000829693 bam 7.4 GB
EGAF00000829694 bam 7.6 GB
EGAF00000829695 bam 7.7 GB
EGAF00000829696 bam 8.2 GB
EGAF00000829697 bam 5.8 GB
EGAF00000829698 bam 5.9 GB
EGAF00000829699 bam 8.5 GB
EGAF00000829700 bam 8.6 GB
EGAF00000829701 bam 6.0 GB
EGAF00000829702 bam 7.8 GB
EGAF00000829703 bam 5.6 GB
EGAF00000829704 bam 8.3 GB
EGAF00000829705 bam 6.1 GB
EGAF00000829706 bam 7.7 GB
EGAF00000829707 bam 6.2 GB
EGAF00000829708 bam 7.7 GB
EGAF00000829709 bam 7.0 GB
EGAF00000829710 bam 7.7 GB
EGAF00000829711 bam 7.7 GB
EGAF00000829712 bam 10.3 GB
EGAF00000829713 bam 9.0 GB
EGAF00000829714 bam 11.1 GB
EGAF00000829715 bam 7.0 GB
EGAF00000829716 bam 8.6 GB
EGAF00000829717 bam 10.0 GB
EGAF00000829718 bam 4.9 GB
EGAF00000829719 bam 13.4 GB
EGAF00000829720 bam 9.3 GB
EGAF00000829721 bam 10.6 GB
EGAF00000829722 bam 15.4 GB
EGAF00000829723 bam 9.0 GB
EGAF00000829724 bam 11.2 GB
EGAF00000829725 bam 11.5 GB
EGAF00000829726 bam 11.4 GB
EGAF00000829727 bam 9.5 GB
EGAF00000829728 bam 16.7 GB
EGAF00000829729 bam 9.8 GB
EGAF00000829730 bam 12.1 GB
EGAF00000829731 bam 10.0 GB
EGAF00000829732 bam 10.4 GB
EGAF00000829733 bam 9.5 GB
EGAF00000829734 bam 11.0 GB
EGAF00000829735 bam 8.6 GB
EGAF00000829736 bam 10.4 GB
EGAF00000829737 bam 11.9 GB
EGAF00000829738 bam 13.2 GB
EGAF00000829739 bam 10.4 GB
EGAF00000829740 bam 13.1 GB
EGAF00000829741 bam 9.4 GB
EGAF00000829742 bam 12.3 GB
EGAF00000829743 bam 9.8 GB
EGAF00000829744 bam 8.5 GB
EGAF00000829745 bam 10.8 GB
EGAF00000829746 bam 10.8 GB
EGAF00000829747 bam 10.3 GB
EGAF00000829748 bam 9.2 GB
EGAF00000829749 bam 11.9 GB
EGAF00000829750 bam 10.8 GB
EGAF00000829751 bam 9.7 GB
EGAF00000829752 bam 11.4 GB
EGAF00000829753 bam 10.5 GB
EGAF00000829754 bam 12.2 GB
EGAF00000829755 bam 7.8 GB
EGAF00000829756 bam 7.7 GB
EGAF00000829757 bam 10.1 GB
EGAF00000829758 bam 13.3 GB
EGAF00000829759 bam 9.3 GB
EGAF00000829760 bam 9.9 GB
EGAF00000829761 bam 7.1 GB
EGAF00000829762 bam 12.4 GB
EGAF00000829763 bam 11.0 GB
EGAF00000829764 bam 9.2 GB
EGAF00000829765 bam 7.2 GB
EGAF00000829766 bam 8.4 GB
EGAF00000829767 bam 13.3 GB
EGAF00000829768 bam 8.6 GB
EGAF00000829769 bam 8.5 GB
EGAF00000829770 bam 8.9 GB
EGAF00000829771 bam 6.4 GB
EGAF00000829772 bam 6.3 GB
EGAF00000829773 bam 6.9 GB
EGAF00000829774 bam 7.8 GB
EGAF00000829775 bam 8.2 GB
EGAF00000829776 bam 7.8 GB
EGAF00000829777 bam 6.4 GB
EGAF00000829778 bam 7.4 GB
EGAF00000829779 bam 8.5 GB
EGAF00000829780 bam 7.7 GB
EGAF00000829781 bam 8.1 GB
EGAF00000829782 bam 6.7 GB
EGAF00000829783 bam 7.0 GB
EGAF00000829784 bam 6.0 GB
EGAF00000829785 bam 7.9 GB
EGAF00000829786 bam 7.9 GB
EGAF00000829787 bam 9.0 GB
EGAF00000829788 bam 7.4 GB
EGAF00000829789 bam 7.7 GB
EGAF00000829790 bam 7.4 GB
EGAF00000829791 bam 9.8 GB
EGAF00000829792 bam 8.1 GB
EGAF00000829793 bam 9.0 GB
EGAF00000829794 bam 9.6 GB
EGAF00000829795 bam 9.1 GB
EGAF00000829796 bam 8.2 GB
EGAF00000829797 bam 9.6 GB
EGAF00000829798 bam 9.8 GB
EGAF00000829799 bam 5.2 GB
EGAF00000829800 bam 12.0 GB
EGAF00000829801 bam 6.2 GB
EGAF00000829802 bam 11.1 GB
162 Files (1.6 TB)