Batches 1-3 prostatectomy analysis
Whole Genome Sequencing Illumina HiSeq data from 95 men with prostate cancer. Samples were taken from primary tissue obtained at prostatectomy (target sequencing depth 50X) with matched blood control (target sequencing depth 30X). This data is from batches 1 to 3 and is the bulk of the data used in Wedge et al, Nature Genetics 2018 (PMID: 29662167). As of September 2020, some of the studies using these data include: Wedge et al, Nature Genetics 2018 (PMID: 29662167) Pan-Cancer Analysis of Whole Genomes, Nature 2020 (PMID: 32025007)
- 27/05/2015
- 150 samples
- DAC: EGAC00001000010
- Technology: Illumina HiSeq 2000
http://www.icgc.org/icgc/goals-structure-policies-guidelines/e1-informed-consent-access-and-ethical-oversight
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001000262 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00000694875 | bam | 157.4 GB | ||
| EGAF00000694876 | bam | 255.1 GB | ||
| EGAF00000694877 | bam | 159.9 GB | ||
| EGAF00000694878 | bam | 246.8 GB | ||
| EGAF00000694879 | bam | 105.0 GB | ||
| EGAF00000694880 | bam | 92.5 GB | ||
| EGAF00000694881 | bam | 152.6 GB | ||
| EGAF00000694882 | bam | 123.1 GB | ||
| EGAF00000694883 | bam | 75.8 GB | ||
| EGAF00000694884 | bam | 270.5 GB | ||
| EGAF00000694885 | bam | 79.9 GB | ||
| EGAF00000694886 | bam | 79.4 GB | ||
| EGAF00000694887 | bam | 172.4 GB | ||
| EGAF00000694888 | bam | 84.6 GB | ||
| EGAF00000694889 | bam | 72.4 GB | ||
| EGAF00000694890 | bam | 90.2 GB | ||
| EGAF00000694891 | bam | 92.5 GB | ||
| EGAF00000694892 | bam | 168.8 GB | ||
| EGAF00000694893 | bam | 169.2 GB | ||
| EGAF00000694894 | bam | 157.9 GB | ||
| EGAF00000694895 | bam | 77.8 GB | ||
| EGAF00000694896 | bam | 145.4 GB | ||
| EGAF00000694897 | bam | 80.4 GB | ||
| EGAF00000694898 | bam | 83.7 GB | ||
| EGAF00000694899 | bam | 154.4 GB | ||
| EGAF00000694900 | bam | 106.3 GB | ||
| EGAF00000694901 | bam | 102.4 GB | ||
| EGAF00000694902 | bam | 128.8 GB | ||
| EGAF00000694903 | bam | 140.4 GB | ||
| EGAF00000694904 | bam | 127.8 GB | ||
| EGAF00000694905 | bam | 134.5 GB | ||
| EGAF00000694906 | bam | 84.2 GB | ||
| EGAF00000694907 | bam | 81.4 GB | ||
| EGAF00000694908 | bam | 157.4 GB | ||
| EGAF00000694909 | bam | 103.7 GB | ||
| EGAF00000694910 | bam | 162.8 GB | ||
| EGAF00000694911 | bam | 126.1 GB | ||
| EGAF00000694912 | bam | 241.6 GB | ||
| EGAF00000694913 | bam | 107.7 GB | ||
| EGAF00000694914 | bam | 179.1 GB | ||
| EGAF00000694915 | bam | 97.1 GB | ||
| EGAF00000694916 | bam | 167.3 GB | ||
| EGAF00000694917 | bam | 168.5 GB | ||
| EGAF00000694918 | bam | 97.7 GB | ||
| EGAF00000694919 | bam | 223.9 GB | ||
| EGAF00000694920 | bam | 99.9 GB | ||
| EGAF00000694921 | bam | 130.8 GB | ||
| EGAF00000694922 | bam | 206.3 GB | ||
| EGAF00000694923 | bam | 111.9 GB | ||
| EGAF00000694924 | bam | 153.3 GB | ||
| EGAF00000694925 | bam | 94.3 GB | ||
| EGAF00000694926 | bam | 150.6 GB | ||
| EGAF00000694927 | bam | 115.5 GB | ||
| EGAF00000694928 | bam | 99.9 GB | ||
| EGAF00000694929 | bam | 200.7 GB | ||
| EGAF00000694930 | bam | 87.9 GB | ||
| EGAF00000694931 | bam | 139.0 GB | ||
| EGAF00000694932 | bam | 92.1 GB | ||
| EGAF00000694933 | bam | 123.6 GB | ||
| EGAF00000694934 | bam | 88.8 GB | ||
| EGAF00000694935 | bam | 121.4 GB | ||
| EGAF00000694936 | bam | 101.7 GB | ||
| EGAF00000694937 | bam | 148.2 GB | ||
| EGAF00000694938 | bam | 100.4 GB | ||
| EGAF00000694939 | bam | 129.1 GB | ||
| EGAF00000694940 | bam | 101.9 GB | ||
| EGAF00000694941 | bam | 143.5 GB | ||
| EGAF00000694942 | bam | 79.9 GB | ||
| EGAF00000694943 | bam | 81.7 GB | ||
| EGAF00000694944 | bam | 101.5 GB | ||
| EGAF00000694945 | bam | 149.9 GB | ||
| EGAF00000694946 | bam | 164.9 GB | ||
| EGAF00000694947 | bam | 78.1 GB | ||
| EGAF00000695908 | bam | 135.5 GB | ||
| EGAF00000695909 | bam | 107.3 GB | ||
| EGAF00000695910 | bam | 104.4 GB | ||
| EGAF00000695911 | bam | 158.0 GB | ||
| EGAF00000695912 | bam | 149.2 GB | ||
| EGAF00000695913 | bam | 156.6 GB | ||
| EGAF00000695914 | bam | 162.1 GB | ||
| EGAF00000695915 | bam | 80.0 GB | ||
| EGAF00000695916 | bam | 96.4 GB | ||
| EGAF00000695917 | bam | 78.0 GB | ||
| EGAF00000695918 | bam | 146.7 GB | ||
| EGAF00000695923 | bam | 82.6 GB | ||
| EGAF00000695924 | bam | 154.8 GB | ||
| EGAF00000695925 | bam | 143.0 GB | ||
| EGAF00000695926 | bam | 84.4 GB | ||
| EGAF00000695927 | bam | 74.1 GB | ||
| EGAF00000695928 | bam | 148.2 GB | ||
| EGAF00000695929 | bam | 169.2 GB | ||
| EGAF00000695930 | bam | 81.7 GB | ||
| EGAF00000696225 | bam | 180.8 GB | ||
| EGAF00000696226 | bam | 126.4 GB | ||
| EGAF00000696227 | bam | 145.3 GB | ||
| EGAF00000696228 | bam | 207.3 GB | ||
| EGAF00000696229 | bam | 119.1 GB | ||
| EGAF00000696230 | bam | 130.9 GB | ||
| EGAF00000696231 | bam | 158.2 GB | ||
| EGAF00000696232 | bam | 103.0 GB | ||
| EGAF00000696233 | bam | 99.1 GB | ||
| EGAF00000696234 | bam | 175.8 GB | ||
| EGAF00000696235 | bam | 185.4 GB | ||
| EGAF00000696236 | bam | 148.2 GB | ||
| EGAF00000696237 | bam | 162.1 GB | ||
| EGAF00000696238 | bam | 142.7 GB | ||
| EGAF00000696239 | bam | 87.2 GB | ||
| EGAF00000696240 | bam | 103.8 GB | ||
| EGAF00000696241 | bam | 124.9 GB | ||
| EGAF00000696242 | bam | 84.6 GB | ||
| EGAF00000696243 | bam | 210.7 GB | ||
| EGAF00000696244 | bam | 110.6 GB | ||
| EGAF00000696245 | bam | 126.6 GB | ||
| EGAF00000696246 | bam | 89.2 GB | ||
| EGAF00000696247 | bam | 97.7 GB | ||
| EGAF00000696248 | bam | 102.0 GB | ||
| EGAF00000696249 | bam | 80.2 GB | ||
| EGAF00000696250 | bam | 277.0 GB | ||
| EGAF00000696251 | bam | 165.4 GB | ||
| EGAF00000696252 | bam | 82.2 GB | ||
| EGAF00000696253 | bam | 77.9 GB | ||
| EGAF00000696254 | bam | 94.5 GB | ||
| EGAF00000696255 | bam | 80.9 GB | ||
| EGAF00000696256 | bam | 78.4 GB | ||
| EGAF00000696257 | bam | 79.4 GB | ||
| EGAF00000696258 | bam | 106.4 GB | ||
| EGAF00000696259 | bam | 80.8 GB | ||
| EGAF00000696260 | bam | 77.9 GB | ||
| EGAF00000696261 | bam | 80.2 GB | ||
| EGAF00000696262 | bam | 137.4 GB | ||
| EGAF00000697759 | bam | 95.4 GB | ||
| EGAF00000697760 | bam | 152.9 GB | ||
| EGAF00000697761 | bam | 120.5 GB | ||
| EGAF00000697762 | bam | 135.2 GB | ||
| EGAF00000697763 | bam | 127.1 GB | ||
| EGAF00000697764 | bam | 114.9 GB | ||
| EGAF00000697765 | bam | 211.8 GB | ||
| EGAF00000697766 | bam | 168.1 GB | ||
| EGAF00000697767 | bam | 159.7 GB | ||
| EGAF00000697768 | bam | 121.0 GB | ||
| EGAF00000697769 | bam | 129.5 GB | ||
| EGAF00000697770 | bam | 115.9 GB | ||
| EGAF00000697771 | bam | 124.1 GB | ||
| EGAF00000697772 | bam | 109.0 GB | ||
| EGAF00000697773 | bam | 189.9 GB | ||
| EGAF00000697774 | bam | 101.6 GB | ||
| EGAF00000697775 | bam | 121.7 GB | ||
| EGAF00000697776 | bam | 183.9 GB | ||
| EGAF00000697777 | bam | 110.1 GB | ||
| EGAF00000697778 | bam | 152.0 GB | ||
| EGAF00000697779 | bam | 101.0 GB | ||
| EGAF00000697780 | bam | 128.2 GB | ||
| EGAF00000697781 | bam | 128.5 GB | ||
| EGAF00000697782 | bam | 169.3 GB | ||
| EGAF00000697783 | bam | 144.9 GB | ||
| EGAF00000697784 | bam | 89.1 GB | ||
| EGAF00000697785 | bam | 156.6 GB | ||
| EGAF00000697786 | bam | 169.0 GB | ||
| EGAF00000697787 | bam | 78.9 GB | ||
| EGAF00000697788 | bam | 80.5 GB | ||
| EGAF00000697789 | bam | 83.6 GB | ||
| EGAF00000697790 | bam | 141.8 GB | ||
| EGAF00000697791 | bam | 143.1 GB | ||
| EGAF00000697792 | bam | 78.3 GB | ||
| EGAF00000697793 | bam | 163.0 GB | ||
| EGAF00000697794 | bam | 191.4 GB | ||
| EGAF00000697795 | bam | 162.2 GB | ||
| EGAF00000697796 | bam | 158.7 GB | ||
| EGAF00000697797 | bam | 87.9 GB | ||
| EGAF00000697798 | bam | 183.9 GB | ||
| EGAF00000697799 | bam | 169.7 GB | ||
| EGAF00000697800 | bam | 79.1 GB | ||
| EGAF00000697801 | bam | 164.5 GB | ||
| EGAF00000697802 | bam | 159.6 GB | ||
| EGAF00000697803 | bam | 159.2 GB | ||
| EGAF00000697885 | bam | 119.8 GB | ||
| EGAF00000697886 | bam | 201.6 GB | ||
| EGAF00000697887 | bam | 199.4 GB | ||
| EGAF00000697888 | bam | 104.1 GB | ||
| EGAF00000697889 | bam | 157.9 GB | ||
| EGAF00000697890 | bam | 102.1 GB | ||
| EGAF00000697891 | bam | 191.8 GB | ||
| EGAF00000697892 | bam | 143.4 GB | ||
| EGAF00000697893 | bam | 103.7 GB | ||
| EGAF00000697894 | bam | 101.3 GB | ||
| EGAF00000697895 | bam | 147.5 GB | ||
| EGAF00000697896 | bam | 130.3 GB | ||
| EGAF00000697897 | bam | 138.6 GB | ||
| EGAF00000697926 | bam | 156.6 GB | ||
| EGAF00000697927 | bam | 91.6 GB | ||
| 190 Files (24.7 TB) | ||||