Complete DNA/RNA sequencing dataset for Australian ICGC ovarian cancer sequencing project 2014-07-07
Complete WGS and RNA-Seq dataset for Australian ICGC ovarian cancer sequencing project 2014-07-07, representing 93 donors. Sequencing was performed on Illumina HiSeq. Alignment of the lane-level fastq data was performed with bwa (WGS data) and RSEM (transcriptome data). For this dataset lane-level .bam files have been merged and de-duplicated to create a single bam file for each sample type (tumour/normal) for each donor. This dataset supersedes all previous datasets for this study. 2016-08-08 updated with 14 outstanding RNA-seq samples & corresponding RSEM bams 2016-12-07 updated with 7 outstanding RNA-seq controls and corresponding RSEM bams
- 17/08/2016
- 331 samples
- DAC: EGAC00001000010
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00000583116 | bam | 25.6 GB | ||
| EGAF00000583117 | bam | 20.6 GB | ||
| EGAF00000583118 | bam | 106.3 GB | ||
| EGAF00000583119 | bam | 129.3 GB | ||
| EGAF00000583120 | bam | 29.0 GB | ||
| EGAF00000583121 | bam | 86.5 GB | ||
| EGAF00000583122 | bam | 152.4 GB | ||
| EGAF00000583123 | bam | 28.6 GB | ||
| EGAF00000583124 | bam | 106.6 GB | ||
| EGAF00000583125 | bam | 143.6 GB | ||
| EGAF00000583126 | bam | 119.7 GB | ||
| EGAF00000583127 | bam | 147.7 GB | ||
| EGAF00000583128 | bam | 132.8 GB | ||
| EGAF00000583129 | bam | 120.8 GB | ||
| EGAF00000583130 | bam | 22.2 GB | ||
| EGAF00000583131 | bam | 94.8 GB | ||
| EGAF00000583132 | bam | 115.5 GB | ||
| EGAF00000583133 | bam | 160.8 GB | ||
| EGAF00000583134 | bam | 113.6 GB | ||
| EGAF00000583135 | bam | 28.1 GB | ||
| EGAF00000583136 | bam | 30.8 GB | ||
| EGAF00000583137 | bam | 108.9 GB | ||
| EGAF00000583138 | bam | 139.4 GB | ||
| EGAF00000583139 | bam | 168.8 GB | ||
| EGAF00000583140 | bam | 26.3 GB | ||
| EGAF00000583141 | bam | 129.7 GB | ||
| EGAF00000583142 | bam | 110.3 GB | ||
| EGAF00000583143 | bam | 129.8 GB | ||
| EGAF00000583144 | bam | 166.5 GB | ||
| EGAF00000583145 | bam | 119.9 GB | ||
| EGAF00000583146 | bam | 23.0 GB | ||
| EGAF00000583147 | bam | 94.8 GB | ||
| EGAF00000583148 | bam | 51.1 GB | ||
| EGAF00000583149 | bam | 34.2 GB | ||
| EGAF00000583150 | bam | 24.4 GB | ||
| EGAF00000583151 | bam | 136.8 GB | ||
| EGAF00000583152 | bam | 141.3 GB | ||
| EGAF00000583153 | bam | 150.1 GB | ||
| EGAF00000583154 | bam | 157.9 GB | ||
| EGAF00000583155 | bam | 25.9 GB | ||
| EGAF00000583156 | bam | 23.4 GB | ||
| EGAF00000583157 | bam | 26.9 GB | ||
| EGAF00000583158 | bam | 142.7 GB | ||
| EGAF00000583159 | bam | 135.4 GB | ||
| EGAF00000583160 | bam | 152.8 GB | ||
| EGAF00000583161 | bam | 129.0 GB | ||
| EGAF00000583162 | bam | 27.2 GB | ||
| EGAF00000583163 | bam | 106.2 GB | ||
| EGAF00000583164 | bam | 109.9 GB | ||
| EGAF00000583165 | bam | 155.3 GB | ||
| EGAF00000583166 | bam | 31.5 GB | ||
| EGAF00000583167 | bam | 123.9 GB | ||
| EGAF00000583168 | bam | 22.4 GB | ||
| EGAF00000583169 | bam | 24.8 GB | ||
| EGAF00000583170 | bam | 29.3 GB | ||
| EGAF00000583171 | bam | 27.8 GB | ||
| EGAF00000583172 | bam | 120.9 GB | ||
| EGAF00000583173 | bam | 148.1 GB | ||
| EGAF00000583174 | bam | 141.9 GB | ||
| EGAF00000583175 | bam | 118.7 GB | ||
| EGAF00000583176 | bam | 20.2 GB | ||
| EGAF00000583177 | bam | 29.5 GB | ||
| EGAF00000583178 | bam | 162.3 GB | ||
| EGAF00000583179 | bam | 20.9 GB | ||
| EGAF00000583180 | bam | 141.3 GB | ||
| EGAF00000583181 | bam | 127.1 GB | ||
| EGAF00000583182 | bam | 143.7 GB | ||
| EGAF00000583183 | bam | 152.4 GB | ||
| EGAF00000583184 | bam | 140.4 GB | ||
| EGAF00000583185 | bam | 148.1 GB | ||
| EGAF00000583186 | bam | 149.0 GB | ||
| EGAF00000583187 | bam | 91.2 GB | ||
| EGAF00000583188 | bam | 114.6 GB | ||
| EGAF00000583189 | bam | 86.2 GB | ||
| EGAF00000583190 | bam | 22.2 GB | ||
| EGAF00000583191 | bam | 25.7 GB | ||
| EGAF00000583192 | bam | 99.4 GB | ||
| EGAF00000583193 | bam | 99.4 GB | ||
| EGAF00000583194 | bam | 156.6 GB | ||
| EGAF00000583195 | bam | 132.1 GB | ||
| EGAF00000583196 | bam | 26.0 GB | ||
| EGAF00000583197 | bam | 122.7 GB | ||
| EGAF00000583198 | bam | 105.1 GB | ||
| EGAF00000583199 | bam | 21.3 GB | ||
| EGAF00000583200 | bam | 109.2 GB | ||
| EGAF00000583201 | bam | 121.7 GB | ||
| EGAF00000583202 | bam | 31.6 GB | ||
| EGAF00000583203 | bam | 33.7 GB | ||
| EGAF00000583204 | bam | 21.0 GB | ||
| EGAF00000583205 | bam | 110.9 GB | ||
| EGAF00000583206 | bam | 122.9 GB | ||
| EGAF00000583207 | bam | 112.8 GB | ||
| EGAF00000583208 | bam | 143.0 GB | ||
| EGAF00000583209 | bam | 19.2 GB | ||
| EGAF00000583210 | bam | 24.1 GB | ||
| EGAF00000583211 | bam | 27.8 GB | ||
| EGAF00000583212 | bam | 116.6 GB | ||
| EGAF00000583213 | bam | 128.6 GB | ||
| EGAF00000583214 | bam | 145.6 GB | ||
| EGAF00000583215 | bam | 135.4 GB | ||
| EGAF00000583216 | bam | 28.8 GB | ||
| EGAF00000583217 | bam | 27.8 GB | ||
| EGAF00000583218 | bam | 18.9 GB | ||
| EGAF00000583219 | bam | 97.9 GB | ||
| EGAF00000583220 | bam | 111.9 GB | ||
| EGAF00000583221 | bam | 129.0 GB | ||
| EGAF00000583222 | bam | 101.8 GB | ||
| EGAF00000583223 | bam | 22.9 GB | ||
| EGAF00000583224 | bam | 128.3 GB | ||
| EGAF00000583225 | bam | 118.2 GB | ||
| EGAF00000583226 | bam | 21.1 GB | ||
| EGAF00000583227 | bam | 122.6 GB | ||
| EGAF00000583228 | bam | 119.5 GB | ||
| EGAF00000583229 | bam | 139.0 GB | ||
| EGAF00000583230 | bam | 106.0 GB | ||
| EGAF00000583231 | bam | 99.5 GB | ||
| EGAF00000583232 | bam | 28.8 GB | ||
| EGAF00000583233 | bam | 32.1 GB | ||
| EGAF00000583234 | bam | 111.3 GB | ||
| EGAF00000583235 | bam | 25.3 GB | ||
| EGAF00000583236 | bam | 118.3 GB | ||
| EGAF00000583237 | bam | 111.1 GB | ||
| EGAF00000583238 | bam | 118.7 GB | ||
| EGAF00000583239 | bam | 22.9 GB | ||
| EGAF00000583240 | bam | 123.7 GB | ||
| EGAF00000583241 | bam | 18.8 GB | ||
| EGAF00000583242 | bam | 110.8 GB | ||
| EGAF00000583243 | bam | 124.9 GB | ||
| EGAF00000583244 | bam | 136.5 GB | ||
| EGAF00000583245 | bam | 25.3 GB | ||
| EGAF00000583246 | bam | 31.2 GB | ||
| EGAF00000583247 | bam | 211.5 GB | ||
| EGAF00000583248 | bam | 113.9 GB | ||
| EGAF00000583249 | bam | 111.8 GB | ||
| EGAF00000583250 | bam | 26.6 GB | ||
| EGAF00000583251 | bam | 23.5 GB | ||
| EGAF00000583252 | bam | 105.1 GB | ||
| EGAF00000583253 | bam | 121.4 GB | ||
| EGAF00000583254 | bam | 17.7 GB | ||
| EGAF00000583255 | bam | 150.0 GB | ||
| EGAF00000583256 | bam | 117.1 GB | ||
| EGAF00000583257 | bam | 71.4 GB | ||
| EGAF00000583258 | bam | 114.5 GB | ||
| EGAF00000583259 | bam | 24.6 GB | ||
| EGAF00000583260 | bam | 185.0 GB | ||
| EGAF00000583261 | bam | 99.7 GB | ||
| EGAF00000583262 | bam | 157.4 GB | ||
| EGAF00000583263 | bam | 124.5 GB | ||
| EGAF00000583264 | bam | 27.1 GB | ||
| EGAF00000583265 | bam | 157.6 GB | ||
| EGAF00000583266 | bam | 27.6 GB | ||
| EGAF00000583267 | bam | 25.0 GB | ||
| EGAF00000583268 | bam | 117.4 GB | ||
| EGAF00000583269 | bam | 93.3 GB | ||
| EGAF00000583270 | bam | 25.4 GB | ||
| EGAF00000583271 | bam | 28.2 GB | ||
| EGAF00000583272 | bam | 20.8 GB | ||
| EGAF00000583273 | bam | 109.5 GB | ||
| EGAF00000583274 | bam | 118.9 GB | ||
| EGAF00000583275 | bam | 318.7 GB | ||
| EGAF00000583276 | bam | 147.5 GB | ||
| EGAF00000583277 | bam | 24.8 GB | ||
| EGAF00000583278 | bam | 26.1 GB | ||
| EGAF00000583279 | bam | 29.6 GB | ||
| EGAF00000583280 | bam | 149.2 GB | ||
| EGAF00000583281 | bam | 140.3 GB | ||
| EGAF00000583282 | bam | 147.8 GB | ||
| EGAF00000583283 | bam | 127.9 GB | ||
| EGAF00000583284 | bam | 131.5 GB | ||
| EGAF00000583285 | bam | 99.8 GB | ||
| EGAF00000583286 | bam | 117.1 GB | ||
| EGAF00000583287 | bam | 24.6 GB | ||
| EGAF00000583288 | bam | 148.0 GB | ||
| EGAF00000583289 | bam | 117.0 GB | ||
| EGAF00000583290 | bam | 140.6 GB | ||
| EGAF00000583291 | bam | 21.4 GB | ||
| EGAF00000583292 | bam | 33.9 GB | ||
| EGAF00000583293 | bam | 28.6 GB | ||
| EGAF00000583294 | bam | 178.0 GB | ||
| EGAF00000583295 | bam | 146.2 GB | ||
| EGAF00000583296 | bam | 27.1 GB | ||
| EGAF00000583297 | bam | 116.1 GB | ||
| EGAF00000583298 | bam | 183.2 GB | ||
| EGAF00000583299 | bam | 21.0 GB | ||
| EGAF00000583300 | bam | 24.2 GB | ||
| EGAF00000583301 | bam | 20.5 GB | ||
| EGAF00000583302 | bam | 143.2 GB | ||
| EGAF00000583303 | bam | 140.0 GB | ||
| EGAF00000583304 | bam | 146.5 GB | ||
| EGAF00000583305 | bam | 116.1 GB | ||
| EGAF00000583306 | bam | 26.6 GB | ||
| EGAF00000583307 | bam | 182.6 GB | ||
| EGAF00000583308 | bam | 105.9 GB | ||
| EGAF00000583309 | bam | 157.0 GB | ||
| EGAF00000583310 | bam | 102.6 GB | ||
| EGAF00000583311 | bam | 32.6 GB | ||
| EGAF00000583312 | bam | 144.1 GB | ||
| EGAF00000583313 | bam | 110.0 GB | ||
| EGAF00000583314 | bam | 156.2 GB | ||
| EGAF00000583315 | bam | 113.9 GB | ||
| EGAF00000583316 | bam | 135.4 GB | ||
| EGAF00000583317 | bam | 115.1 GB | ||
| EGAF00000583318 | bam | 118.2 GB | ||
| EGAF00000583319 | bam | 26.1 GB | ||
| EGAF00000583320 | bam | 52.1 GB | ||
| EGAF00000583321 | bam | 30.1 GB | ||
| EGAF00000583322 | bam | 145.7 GB | ||
| EGAF00000583323 | bam | 133.7 GB | ||
| EGAF00000583324 | bam | 102.9 GB | ||
| EGAF00000583325 | bam | 97.3 GB | ||
| EGAF00000583326 | bam | 28.7 GB | ||
| EGAF00000583327 | bam | 25.8 GB | ||
| EGAF00000583328 | bam | 28.5 GB | ||
| EGAF00000583329 | bam | 124.4 GB | ||
| EGAF00000583330 | bam | 31.0 GB | ||
| EGAF00000583331 | bam | 25.8 GB | ||
| EGAF00000583332 | bam | 31.6 GB | ||
| EGAF00000583333 | bam | 124.8 GB | ||
| EGAF00000583334 | bam | 113.9 GB | ||
| EGAF00000583335 | bam | 144.0 GB | ||
| EGAF00000583336 | bam | 139.4 GB | ||
| EGAF00000583337 | bam | 24.3 GB | ||
| EGAF00000583338 | bam | 152.6 GB | ||
| EGAF00000583339 | bam | 29.2 GB | ||
| EGAF00000583340 | bam | 103.8 GB | ||
| EGAF00000583341 | bam | 28.5 GB | ||
| EGAF00000583342 | bam | 122.1 GB | ||
| EGAF00000583343 | bam | 128.3 GB | ||
| EGAF00000583344 | bam | 25.5 GB | ||
| EGAF00000583345 | bam | 26.6 GB | ||
| EGAF00000583346 | bam | 99.2 GB | ||
| EGAF00000583347 | bam | 25.3 GB | ||
| EGAF00000583348 | bam | 142.6 GB | ||
| EGAF00000583349 | bam | 28.4 GB | ||
| EGAF00000583350 | bam | 132.6 GB | ||
| EGAF00000583351 | bam | 153.9 GB | ||
| EGAF00000583352 | bam | 20.8 GB | ||
| EGAF00000583353 | bam | 144.7 GB | ||
| EGAF00000583354 | bam | 121.7 GB | ||
| EGAF00000583355 | bam | 103.1 GB | ||
| EGAF00000583356 | bam | 102.9 GB | ||
| EGAF00000583357 | bam | 149.1 GB | ||
| EGAF00000583358 | bam | 135.6 GB | ||
| EGAF00000583359 | bam | 133.6 GB | ||
| EGAF00000583360 | bam | 136.6 GB | ||
| EGAF00000583361 | bam | 141.6 GB | ||
| EGAF00000583362 | bam | 114.5 GB | ||
| EGAF00000583363 | bam | 98.9 GB | ||
| EGAF00000583364 | bam | 114.7 GB | ||
| EGAF00000583365 | bam | 139.0 GB | ||
| EGAF00000583366 | bam | 140.5 GB | ||
| EGAF00000583367 | bam | 19.8 GB | ||
| EGAF00000583368 | bam | 25.6 GB | ||
| EGAF00000583369 | bam | 120.9 GB | ||
| EGAF00000583370 | bam | 147.9 GB | ||
| EGAF00000583371 | bam | 125.9 GB | ||
| EGAF00000583372 | bam | 33.4 GB | ||
| EGAF00000583373 | bam | 120.3 GB | ||
| EGAF00000583374 | bam | 96.6 GB | ||
| EGAF00000583375 | bam | 109.4 GB | ||
| EGAF00000583376 | bam | 145.0 GB | ||
| EGAF00000583377 | bam | 114.5 GB | ||
| EGAF00000583378 | bam | 36.4 GB | ||
| EGAF00000583379 | bam | 96.0 GB | ||
| EGAF00000583380 | bam | 185.0 GB | ||
| EGAF00000583381 | bam | 93.7 GB | ||
| EGAF00000583382 | bam | 97.5 GB | ||
| EGAF00000583383 | bam | 107.6 GB | ||
| EGAF00000583384 | bam | 25.8 GB | ||
| EGAF00000583385 | bam | 137.5 GB | ||
| EGAF00000583386 | bam | 124.3 GB | ||
| EGAF00000583387 | bam | 125.2 GB | ||
| EGAF00000583388 | bam | 109.2 GB | ||
| EGAF00000583389 | bam | 60.6 GB | ||
| EGAF00000583390 | bam | 130.3 GB | ||
| EGAF00000583391 | bam | 68.9 GB | ||
| EGAF00000583392 | bam | 121.8 GB | ||
| EGAF00000583393 | bam | 100.1 GB | ||
| EGAF00000583394 | bam | 29.4 GB | ||
| EGAF00000583395 | bam | 30.8 GB | ||
| EGAF00000583396 | bam | 29.0 GB | ||
| EGAF00000583397 | bam | 102.2 GB | ||
| EGAF00000583398 | bam | 137.0 GB | ||
| EGAF00000583399 | bam | 133.0 GB | ||
| EGAF00000583400 | bam | 114.5 GB | ||
| EGAF00000583401 | bam | 101.8 GB | ||
| EGAF00000583402 | bam | 143.9 GB | ||
| EGAF00000583403 | bam | 107.1 GB | ||
| EGAF00000583404 | bam | 113.8 GB | ||
| EGAF00000583405 | bam | 23.6 GB | ||
| EGAF00000583406 | bam | 126.0 GB | ||
| EGAF00000583407 | bam | 127.1 GB | ||
| EGAF00000583408 | bam | 99.1 GB | ||
| EGAF00000583409 | bam | 162.6 GB | ||
| EGAF00000583410 | bam | 111.3 GB | ||
| EGAF00000583411 | bam | 154.1 GB | ||
| EGAF00000583412 | bam | 26.6 GB | ||
| EGAF00000583413 | bam | 125.7 GB | ||
| EGAF00000583414 | bam | 25.8 GB | ||
| EGAF00000583415 | bam | 34.0 GB | ||
| EGAF00000583416 | bam | 125.7 GB | ||
| EGAF00000583417 | bam | 133.6 GB | ||
| EGAF00000583418 | bam | 148.0 GB | ||
| EGAF00000583419 | bam | 24.3 GB | ||
| EGAF00000583420 | bam | 32.6 GB | ||
| EGAF00000583421 | bam | 53.1 GB | ||
| EGAF00000583422 | bam | 98.0 GB | ||
| EGAF00000583423 | bam | 117.7 GB | ||
| EGAF00000583424 | bam | 268.5 GB | ||
| EGAF00000583425 | bam | 106.0 GB | ||
| EGAF00001236211 | bam | 34.3 GB | ||
| EGAF00001236212 | bam | 34.4 GB | ||
| EGAF00001236213 | bam | 30.6 GB | ||
| EGAF00001236214 | bam | 37.0 GB | ||
| EGAF00001236215 | bam | 35.6 GB | ||
| EGAF00001236216 | bam | 25.0 GB | ||
| EGAF00001236217 | bam | 28.7 GB | ||
| EGAF00001236218 | bam | 36.7 GB | ||
| EGAF00001236219 | bam | 27.4 GB | ||
| EGAF00001236220 | bam | 31.4 GB | ||
| EGAF00001236221 | bam | 29.4 GB | ||
| EGAF00001236222 | bam | 29.2 GB | ||
| EGAF00001236223 | bam | 25.1 GB | ||
| EGAF00001236224 | bam | 25.1 GB | ||
| EGAF00001420130 | bam | 20.0 GB | ||
| EGAF00001420131 | bam | 20.5 GB | ||
| EGAF00001420132 | bam | 25.5 GB | ||
| EGAF00001420133 | bam | 24.2 GB | ||
| EGAF00001420134 | bam | 21.6 GB | ||
| EGAF00001420135 | bam | 25.2 GB | ||
| EGAF00001420136 | bam | 26.0 GB | ||
| 331 Files (30.1 TB) | ||||