Small cell carcinoma of the ovary, hypercalcemic type, displays frequent inactivating germline and somatic mutations in SMARCA4
Small cell carcinoma of the ovary of hypercalcemic type (SCCOHT) is an extremely rare, aggressive cancer affecting children and young women. We identified germline and somatic inactivating mutations in the SWI/SNF chromatin-remodeling gene SMARCA4 in 75% (9/12) of SCCOHT patients in addition to SMARCA4 protein loss in 82% (14/17) of SCCOHT tumors, but in only 0.4% (2/485) of other primary ovarian tumors. These data implicate SMARCA4 in SCCOHT oncogenesis.
- 23/08/2016
- 19 samples
- DAC: EGAC00000000011
- Technology: Illumina HiSeq 2000
- TS DUO:0000025 (version: 2021-02-23)time limit on useThis data use modifier indicates that use is approved for a specific number of months.
- PS DUO:0000027 (version: 2021-02-23)project specific restrictionThis data use modifier indicates that use is limited to use within an approved project.
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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001000714 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00000508958 | bam | 206.0 GB | ||
| EGAF00000508959 | bam | 17.3 GB | ||
| EGAF00000508960 | bam | 9.0 GB | ||
| EGAF00000508961 | bam | 16.9 GB | ||
| EGAF00000508962 | bam | 23.2 GB | ||
| EGAF00000508963 | bam | 207.5 GB | ||
| EGAF00000508964 | bam | 24.2 GB | ||
| EGAF00000508965 | bam | 211.3 GB | ||
| EGAF00000508966 | bam | 225.2 GB | ||
| EGAF00000508967 | bam | 212.9 GB | ||
| EGAF00000508968 | bam | 15.1 GB | ||
| EGAF00000508969 | bam | 14.4 GB | ||
| EGAF00000697928 | bam | 24.4 GB | ||
| EGAF00000697929 | bam | 20.4 GB | ||
| EGAF00000697930 | bam | 22.1 GB | ||
| EGAF00000697931 | bam | 32.2 GB | ||
| EGAF00000697932 | bam | 31.1 GB | ||
| EGAF00000697933 | bam | 25.9 GB | ||
| EGAF00000697934 | bam | 29.9 GB | ||
| EGAF00000697935 | bam | 32.8 GB | ||
| 20 Files (1.4 TB) | ||||