Triple Negative Breast Cancer Whole Genome Validations
We propose to definitively characterise the somatic genetics of Triple negative breast cancer through generation of comprehensive catalogues of somatic mutations in 500 cases by high coverage genome sequencing coupled with integrated transcriptomic and methylation analyses. This study will use a bespoke bait set to pulldown regions of interest found in whole genome sequencing to validate mutations found.
- 27/05/2015
- 46 samples
- DAC: EGAC00001000010
- Technology: Illumina HiSeq 2000
http://www.icgc.org/icgc/goals-structure-policies-guidelines/e1-informed-consent-access-and-ethical-oversight
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001000426 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00000231649 | bam | 2.0 GB | ||
| EGAF00000231650 | bam | 2.0 GB | ||
| EGAF00000231651 | bam | 1.8 GB | ||
| EGAF00000231652 | bam | 2.4 GB | ||
| EGAF00000231653 | bam | 1.8 GB | ||
| EGAF00000231654 | bam | 2.6 GB | ||
| EGAF00000231655 | bam | 1.7 GB | ||
| EGAF00000231656 | bam | 1.7 GB | ||
| EGAF00000231657 | bam | 1.5 GB | ||
| EGAF00000231658 | bam | 1.5 GB | ||
| EGAF00000231659 | bam | 1.6 GB | ||
| EGAF00000231660 | bam | 1.3 GB | ||
| EGAF00000231661 | bam | 1.4 GB | ||
| EGAF00000231662 | bam | 1.4 GB | ||
| EGAF00000231663 | bam | 1.5 GB | ||
| EGAF00000231664 | bam | 1.5 GB | ||
| EGAF00000231665 | bam | 1.2 GB | ||
| EGAF00000231666 | bam | 1.2 GB | ||
| EGAF00000231667 | bam | 1.3 GB | ||
| EGAF00000231668 | bam | 1.1 GB | ||
| EGAF00000231669 | bam | 1.2 GB | ||
| EGAF00000231670 | bam | 1.5 GB | ||
| EGAF00000233032 | bam | 1.3 GB | ||
| EGAF00000233033 | bam | 1.3 GB | ||
| EGAF00000233034 | bam | 1.1 GB | ||
| EGAF00000233035 | bam | 1.0 GB | ||
| EGAF00000233036 | bam | 1.1 GB | ||
| EGAF00000233037 | bam | 1.1 GB | ||
| EGAF00000233038 | bam | 1.2 GB | ||
| EGAF00000233039 | bam | 1.3 GB | ||
| EGAF00000233040 | bam | 1.8 GB | ||
| EGAF00000233041 | bam | 1.8 GB | ||
| EGAF00000233042 | bam | 1.9 GB | ||
| EGAF00000233043 | bam | 1.8 GB | ||
| EGAF00000233044 | bam | 2.1 GB | ||
| EGAF00000233045 | bam | 2.0 GB | ||
| EGAF00000233046 | bam | 1.9 GB | ||
| EGAF00000233047 | bam | 1.7 GB | ||
| EGAF00000233048 | bam | 1.6 GB | ||
| EGAF00000233049 | bam | 1.5 GB | ||
| EGAF00000233050 | bam | 1.4 GB | ||
| EGAF00000233051 | bam | 1.3 GB | ||
| EGAF00000233052 | bam | 1.3 GB | ||
| EGAF00000233053 | bam | 1.3 GB | ||
| EGAF00000233054 | bam | 1.3 GB | ||
| EGAF00000233055 | bam | 1.2 GB | ||
| EGAF00000242305 | bam | 1.3 GB | ||
| EGAF00000242306 | bam | 1.3 GB | ||
| EGAF00000242307 | bam | 1.1 GB | ||
| EGAF00000242308 | bam | 1.1 GB | ||
| EGAF00000242309 | bam | 1.1 GB | ||
| EGAF00000242310 | bam | 1.1 GB | ||
| EGAF00000242311 | bam | 1.2 GB | ||
| EGAF00000242312 | bam | 1.3 GB | ||
| EGAF00000242313 | bam | 1.9 GB | ||
| EGAF00000242314 | bam | 1.8 GB | ||
| EGAF00000242315 | bam | 1.9 GB | ||
| EGAF00000242316 | bam | 1.9 GB | ||
| EGAF00000242317 | bam | 2.1 GB | ||
| EGAF00000242318 | bam | 2.1 GB | ||
| EGAF00000242319 | bam | 2.0 GB | ||
| EGAF00000242320 | bam | 1.8 GB | ||
| EGAF00000242321 | bam | 1.6 GB | ||
| EGAF00000242322 | bam | 1.5 GB | ||
| EGAF00000242323 | bam | 1.5 GB | ||
| EGAF00000242324 | bam | 1.3 GB | ||
| EGAF00000242325 | bam | 1.3 GB | ||
| EGAF00000242326 | bam | 1.3 GB | ||
| EGAF00000242327 | bam | 1.4 GB | ||
| EGAF00000242328 | bam | 1.2 GB | ||
| EGAF00000242329 | bam | 2.2 GB | ||
| EGAF00000242330 | bam | 2.2 GB | ||
| EGAF00000242331 | bam | 2.0 GB | ||
| EGAF00000242332 | bam | 2.6 GB | ||
| EGAF00000242333 | bam | 1.9 GB | ||
| EGAF00000242334 | bam | 2.8 GB | ||
| EGAF00000242335 | bam | 1.8 GB | ||
| EGAF00000242336 | bam | 1.8 GB | ||
| EGAF00000242337 | bam | 1.6 GB | ||
| EGAF00000242338 | bam | 1.6 GB | ||
| EGAF00000242339 | bam | 1.7 GB | ||
| EGAF00000242340 | bam | 1.3 GB | ||
| EGAF00000242341 | bam | 1.5 GB | ||
| EGAF00000242342 | bam | 1.5 GB | ||
| EGAF00000242343 | bam | 1.6 GB | ||
| EGAF00000242344 | bam | 1.6 GB | ||
| EGAF00000242345 | bam | 1.3 GB | ||
| EGAF00000242346 | bam | 1.3 GB | ||
| EGAF00000242347 | bam | 1.4 GB | ||
| EGAF00000242348 | bam | 1.1 GB | ||
| EGAF00000242349 | bam | 1.3 GB | ||
| EGAF00000242350 | bam | 1.6 GB | ||
| 92 Files (144.2 GB) | ||||