Somatic pseudogenes acquired during cancer development – Whole Exome sequencing

Insertion of processed pseudogenes is known to occur in the germline but has not previously been observed in somatic cells. Formation of pseudogenes could represent a new class of mutation in cancers and a new source of potential driver events.

27/05/2015
4 samples
DAC: EGAC00001000000
Technologies: Illumina Genome Analyzer II, Illumina HiSeq 2000

Access Policy3 Studies Files

Metadata

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PUB DUO:0000019 (version: 2021-02-23)publication requiredThis data use modifier indicates that requestor agrees to make results of studies using the data available to the larger scientific community.
US DUO:0000026 (version: 2021-02-23)user specific restrictionThis data use modifier indicates that use is limited to use by approved users.
IS DUO:0000028 (version: 2021-02-23)institution specific restrictionThis data use modifier indicates that use is limited to use within an approved institution.
GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.

Wellcome Trust Sanger Institute Cancer Genome Group Data Sharing Policy

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001000038	Chondrosarcoma_Exome_	Cancer Genomics
EGAS00001000103	Genomics_of_Colorectal_Cancer_Metastases___Massively_Parallel_Sequencing_of_Matched_Primary_and_Metastatic_tumours_to_Identify_a_Metastatic_Signature_of_Somatic_Mutations__MOSAIC_	Cancer Genomics
EGAS00001000211	Breast_Cancer_Exome_Sequencing	Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00000064574	bam	8.5 GB
EGAF00000064575	bam	8.6 GB
EGAF00000067439	bam	8.8 GB
EGAF00000070282	bam	10.5 GB
EGAF00000118877	bam	9.2 GB
5 Files (45.7 GB)