Primary Lung Cancer whole genome study
Genomic libraries (500 bps) will be generated from total genomic DNA derived from lung cancer patients and subjected to short paired end sequencing on the llumina platform. Paired reads will be mapped to build 37 of the human reference genome to facilitate the generation of genome wide copy number information, and the identification of novel rearranged cancer genes and gene fusions.
- 27/05/2015
- 15 samples
- DAC: EGAC00001000000
- Technology: Illumina HiSeq 2000
- PUB DUO:0000019 (version: 2021-02-23)publication requiredThis data use modifier indicates that requestor agrees to make results of studies using the data available to the larger scientific community.
- US DUO:0000026 (version: 2021-02-23)user specific restrictionThis data use modifier indicates that use is limited to use by approved users.
- IS DUO:0000028 (version: 2021-02-23)institution specific restrictionThis data use modifier indicates that use is limited to use within an approved institution.
- GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.
Wellcome Trust Sanger Institute Cancer Genome Group Data Sharing Policy
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00000156235 | bam | 23.9 GB | ||
| EGAF00000156236 | bam | 21.9 GB | ||
| EGAF00000156237 | bam | 16.9 GB | ||
| EGAF00000156238 | bam | 26.7 GB | ||
| EGAF00000162423 | bam | 20.8 GB | ||
| EGAF00000164121 | bam | 29.9 GB | ||
| EGAF00000164122 | bam | 33.6 GB | ||
| EGAF00000164123 | bam | 34.4 GB | ||
| EGAF00000164124 | bam | 34.4 GB | ||
| EGAF00000164125 | bam | 37.6 GB | ||
| EGAF00000167239 | bam | 33.0 GB | ||
| EGAF00000188425 | bam | 15.4 GB | ||
| EGAF00000188426 | bam | 12.3 GB | ||
| EGAF00000188427 | bam | 11.6 GB | ||
| EGAF00000188428 | bam | 12.8 GB | ||
| EGAF00000234398 | bam | 31.5 GB | ||
| EGAF00000234399 | bam | 32.7 GB | ||
| EGAF00000234400 | bam | 33.0 GB | ||
| EGAF00000234401 | bam | 30.6 GB | ||
| EGAF00000234402 | bam | 30.6 GB | ||
| EGAF00000234403 | bam | 37.3 GB | ||
| EGAF00000278984 | bam | 32.0 GB | ||
| 22 Files (592.9 GB) | ||||