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Myelodysplastic syndrome whole genomes

Wholegenome libraries will be prepared from at least two serial samples reflecting different stages of disease progression and matched constitutional DNA for 30 Myelodysplastic syndrome patient samples. Five lanes of Illumina HiSeq sequencing will be performed on each of the tumour samples and four lanes for each of the constitutional DNA. Sequencing data will mapped to build 37 of the human reference genome and analysis will be performed to characterize the spectrum of somatic variation present in these samples including single base pair mutations, insertions, deletions as well as larger structural variants and genomic rearrangements.

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http://www.icgc.org/icgc/goals-structure-policies-guidelines/e1-informed-consent-access-and-ethical-oversight

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000291 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00000149732 bam 30.3 GB
EGAF00000149733 bam 21.8 GB
EGAF00000149734 bam 20.6 GB
EGAF00000149735 bam 25.8 GB
EGAF00000149736 bam 18.0 GB
EGAF00000149737 bam 25.1 GB
EGAF00000151204 bam 21.1 GB
EGAF00000151205 bam 32.4 GB
EGAF00000151206 bam 28.1 GB
EGAF00000151207 bam 19.6 GB
EGAF00000151208 bam 26.1 GB
EGAF00000163237 bam 31.7 GB
EGAF00000163238 bam 28.6 GB
EGAF00000163239 bam 29.7 GB
EGAF00000163240 bam 30.3 GB
EGAF00000163241 bam 27.0 GB
EGAF00000163242 bam 23.7 GB
EGAF00000163243 bam 32.1 GB
EGAF00000163244 bam 31.3 GB
EGAF00000164604 bam 34.3 GB
EGAF00000164605 bam 34.4 GB
EGAF00000164606 bam 35.1 GB
EGAF00000164607 bam 35.0 GB
EGAF00000164608 bam 35.5 GB
EGAF00000164609 bam 35.3 GB
EGAF00000167145 bam 18.5 GB
EGAF00000167146 bam 18.9 GB
EGAF00000167147 bam 18.4 GB
EGAF00000167148 bam 34.9 GB
EGAF00000167149 bam 34.8 GB
EGAF00000167150 bam 35.6 GB
EGAF00000168074 bam 36.5 GB
EGAF00000168075 bam 36.6 GB
EGAF00000168076 bam 36.4 GB
EGAF00000168683 bam 31.1 GB
EGAF00000168684 bam 30.8 GB
EGAF00000168685 bam 30.8 GB
EGAF00000168686 bam 22.6 GB
EGAF00000170565 bam 35.0 GB
EGAF00000170566 bam 35.1 GB
EGAF00000170567 bam 34.5 GB
EGAF00000170568 bam 34.6 GB
EGAF00000170569 bam 34.0 GB
EGAF00000170570 bam 33.8 GB
EGAF00000170571 bam 32.4 GB
EGAF00000177803 bam 33.9 GB
EGAF00000177804 bam 33.8 GB
EGAF00000177805 bam 36.5 GB
EGAF00000177806 bam 35.8 GB
EGAF00000177807 bam 34.4 GB
EGAF00000177808 bam 34.2 GB
EGAF00000177809 bam 32.1 GB
EGAF00000177810 bam 32.4 GB
EGAF00000177811 bam 31.0 GB
EGAF00000177812 bam 31.2 GB
EGAF00000177813 bam 31.3 GB
EGAF00000181078 bam 3.0 GB
EGAF00000181079 bam 2.3 GB
EGAF00000181080 bam 3.9 GB
EGAF00000181081 bam 4.2 GB
EGAF00000181082 bam 4.8 GB
EGAF00000181083 bam 3.5 GB
EGAF00000181084 bam 3.6 GB
EGAF00000181085 bam 4.0 GB
EGAF00000181086 bam 3.1 GB
EGAF00000181087 bam 5.3 GB
EGAF00000181088 bam 5.8 GB
EGAF00000181089 bam 6.6 GB
EGAF00000181090 bam 4.8 GB
EGAF00000181091 bam 4.9 GB
EGAF00000181092 bam 4.0 GB
EGAF00000181093 bam 3.1 GB
EGAF00000181094 bam 5.3 GB
EGAF00000181095 bam 5.8 GB
EGAF00000181096 bam 6.6 GB
EGAF00000181097 bam 4.8 GB
EGAF00000181098 bam 4.9 GB
EGAF00000181099 bam 3.5 GB
EGAF00000181100 bam 2.6 GB
EGAF00000181101 bam 4.7 GB
EGAF00000181102 bam 5.0 GB
EGAF00000181103 bam 5.7 GB
EGAF00000181104 bam 4.1 GB
EGAF00000181105 bam 4.3 GB
EGAF00000181106 bam 4.0 GB
EGAF00000181107 bam 3.1 GB
EGAF00000181108 bam 5.3 GB
EGAF00000181109 bam 5.7 GB
EGAF00000181110 bam 6.6 GB
EGAF00000181111 bam 4.8 GB
EGAF00000181112 bam 4.9 GB
EGAF00000181113 bam 3.9 GB
EGAF00000181114 bam 3.1 GB
EGAF00000181115 bam 7.3 GB
EGAF00000181116 bam 8.0 GB
EGAF00000181117 bam 9.5 GB
EGAF00000181118 bam 6.7 GB
EGAF00000181119 bam 6.8 GB
EGAF00000181120 bam 3.9 GB
EGAF00000181121 bam 3.1 GB
EGAF00000181122 bam 7.3 GB
EGAF00000181123 bam 7.9 GB
EGAF00000181124 bam 9.4 GB
EGAF00000181125 bam 6.6 GB
EGAF00000181126 bam 6.8 GB
EGAF00000181127 bam 3.3 GB
EGAF00000181128 bam 2.6 GB
EGAF00000181129 bam 6.9 GB
EGAF00000181130 bam 7.5 GB
EGAF00000181131 bam 8.8 GB
EGAF00000181132 bam 6.2 GB
EGAF00000181133 bam 6.4 GB
EGAF00000181134 bam 3.9 GB
EGAF00000181135 bam 3.2 GB
EGAF00000181136 bam 7.4 GB
EGAF00000181137 bam 8.1 GB
EGAF00000181138 bam 9.6 GB
EGAF00000181139 bam 6.8 GB
EGAF00000181140 bam 6.9 GB
EGAF00000181141 bam 4.1 GB
EGAF00000181142 bam 3.1 GB
EGAF00000181143 bam 5.5 GB
EGAF00000181144 bam 6.0 GB
EGAF00000181145 bam 6.9 GB
EGAF00000181146 bam 5.0 GB
EGAF00000181147 bam 5.1 GB
EGAF00000181148 bam 4.1 GB
EGAF00000181149 bam 3.2 GB
EGAF00000181150 bam 5.7 GB
EGAF00000181151 bam 6.2 GB
EGAF00000181152 bam 7.1 GB
EGAF00000181153 bam 5.1 GB
EGAF00000181154 bam 5.2 GB
EGAF00000181155 bam 4.1 GB
EGAF00000181156 bam 3.2 GB
EGAF00000181157 bam 5.7 GB
EGAF00000181158 bam 6.2 GB
EGAF00000181159 bam 7.1 GB
EGAF00000181160 bam 5.2 GB
EGAF00000181161 bam 5.3 GB
EGAF00000181162 bam 4.2 GB
EGAF00000181163 bam 3.2 GB
EGAF00000181164 bam 5.7 GB
EGAF00000181165 bam 6.2 GB
EGAF00000181166 bam 7.2 GB
EGAF00000181167 bam 5.2 GB
EGAF00000181168 bam 5.3 GB
EGAF00000181169 bam 3.7 GB
EGAF00000181170 bam 3.0 GB
EGAF00000181171 bam 6.7 GB
EGAF00000181172 bam 7.3 GB
EGAF00000181173 bam 8.6 GB
EGAF00000181174 bam 6.2 GB
EGAF00000181175 bam 6.2 GB
EGAF00000181176 bam 3.8 GB
EGAF00000181177 bam 3.0 GB
EGAF00000181178 bam 6.8 GB
EGAF00000181179 bam 7.5 GB
EGAF00000181180 bam 8.8 GB
EGAF00000181181 bam 6.2 GB
EGAF00000181182 bam 6.3 GB
EGAF00000181183 bam 4.4 GB
EGAF00000181184 bam 3.4 GB
EGAF00000181185 bam 6.0 GB
EGAF00000181186 bam 6.5 GB
EGAF00000181187 bam 7.6 GB
EGAF00000181188 bam 5.4 GB
EGAF00000181189 bam 5.6 GB
EGAF00000181190 bam 4.4 GB
EGAF00000181191 bam 3.4 GB
EGAF00000181192 bam 5.9 GB
EGAF00000181193 bam 6.4 GB
EGAF00000181194 bam 7.5 GB
EGAF00000181195 bam 5.4 GB
EGAF00000181196 bam 5.5 GB
EGAF00000181197 bam 4.1 GB
EGAF00000181198 bam 3.2 GB
EGAF00000181199 bam 7.5 GB
EGAF00000181200 bam 8.2 GB
EGAF00000181201 bam 9.6 GB
EGAF00000181202 bam 6.8 GB
EGAF00000181203 bam 6.9 GB
EGAF00000181204 bam 4.0 GB
EGAF00000181205 bam 3.2 GB
EGAF00000181206 bam 7.5 GB
EGAF00000181207 bam 8.2 GB
EGAF00000181208 bam 9.7 GB
EGAF00000181209 bam 6.8 GB
EGAF00000181210 bam 7.0 GB
EGAF00000181211 bam 4.0 GB
EGAF00000181212 bam 3.2 GB
EGAF00000181213 bam 7.5 GB
EGAF00000181214 bam 8.2 GB
EGAF00000181215 bam 9.7 GB
EGAF00000181216 bam 6.8 GB
EGAF00000181217 bam 7.0 GB
EGAF00000181218 bam 4.1 GB
EGAF00000181219 bam 3.2 GB
EGAF00000181220 bam 7.6 GB
EGAF00000181221 bam 8.2 GB
EGAF00000181222 bam 9.7 GB
EGAF00000181223 bam 6.9 GB
EGAF00000181224 bam 7.0 GB
EGAF00000231492 bam 16.6 GB
EGAF00000231493 bam 15.8 GB
EGAF00000231494 bam 16.7 GB
EGAF00000231495 bam 15.3 GB
EGAF00000231496 bam 13.5 GB
EGAF00000231497 bam 15.9 GB
EGAF00000231498 bam 18.2 GB
EGAF00000231499 bam 14.3 GB
EGAF00000231500 bam 16.2 GB
EGAF00000231501 bam 13.6 GB
EGAF00000231502 bam 17.9 GB
EGAF00000231503 bam 13.1 GB
EGAF00000231504 bam 14.8 GB
EGAF00000231505 bam 22.8 GB
EGAF00000231506 bam 17.5 GB
EGAF00000231507 bam 13.7 GB
EGAF00000231508 bam 18.5 GB
EGAF00000231509 bam 17.6 GB
EGAF00000231510 bam 20.1 GB
EGAF00000231511 bam 21.5 GB
EGAF00000231512 bam 17.7 GB
EGAF00000231513 bam 17.8 GB
EGAF00000231514 bam 21.7 GB
EGAF00000231515 bam 15.7 GB
EGAF00000231516 bam 18.4 GB
EGAF00000231517 bam 14.9 GB
EGAF00000231518 bam 13.2 GB
EGAF00000231519 bam 14.5 GB
EGAF00000231520 bam 15.1 GB
EGAF00000234286 bam 39.5 GB
EGAF00000234287 bam 35.1 GB
EGAF00000234288 bam 33.4 GB
EGAF00000234289 bam 31.3 GB
EGAF00000234290 bam 39.2 GB
EGAF00000254612 bam 44.6 GB
EGAF00000256490 bam 31.9 GB
EGAF00000283090 cram 10.1 GB
EGAF00000284428 cram 18.9 GB
EGAF00000284429 cram 20.2 GB
EGAF00000284430 cram 16.8 GB
EGAF00000284431 cram 17.3 GB
EGAF00000284432 cram 13.1 GB
EGAF00000284433 cram 18.0 GB
EGAF00000284434 cram 18.2 GB
EGAF00000284435 cram 20.1 GB
EGAF00000286331 cram 19.6 GB
EGAF00000286332 cram 20.1 GB
EGAF00000286333 cram 14.8 GB
EGAF00000286334 cram 14.5 GB
EGAF00000286335 cram 14.6 GB
EGAF00000286336 cram 14.6 GB
EGAF00000286337 cram 15.9 GB
EGAF00000286338 cram 15.7 GB
EGAF00000286339 cram 19.0 GB
EGAF00000286340 cram 19.1 GB
EGAF00000286341 cram 22.5 GB
EGAF00000286342 cram 22.3 GB
EGAF00000286343 cram 22.3 GB
EGAF00000286344 cram 21.7 GB
EGAF00000286345 cram 22.7 GB
EGAF00000286346 cram 22.4 GB
EGAF00000286347 cram 25.7 GB
EGAF00000289004 cram 13.1 GB
EGAF00000289005 cram 12.5 GB
EGAF00000289006 cram 14.7 GB
EGAF00000289007 cram 16.1 GB
EGAF00000289008 cram 18.3 GB
EGAF00000289009 cram 14.5 GB
EGAF00000289010 cram 13.5 GB
EGAF00000289011 cram 16.9 GB
EGAF00000318460 cram 17.1 GB
EGAF00000318461 cram 17.9 GB
EGAF00000318462 cram 13.7 GB
EGAF00000318463 cram 19.6 GB
EGAF00000318464 cram 15.3 GB
EGAF00000318465 cram 20.3 GB
EGAF00000320297 cram 14.0 GB
EGAF00000320298 cram 14.6 GB
EGAF00000320299 cram 18.9 GB
EGAF00000320300 cram 19.2 GB
EGAF00000320301 cram 19.4 GB
EGAF00000320302 cram 16.7 GB
EGAF00000320303 cram 13.9 GB
EGAF00000320304 cram 14.1 GB
EGAF00000322118 cram 18.8 GB
EGAF00000322119 cram 12.2 GB
EGAF00000322120 cram 8.8 GB
EGAF00000322121 cram 10.2 GB
EGAF00000322122 cram 7.2 GB
EGAF00000322123 cram 19.7 GB
EGAF00000322124 cram 16.7 GB
EGAF00000322125 cram 21.9 GB
EGAF00000322126 cram 15.5 GB
EGAF00000322127 cram 17.0 GB
EGAF00000322128 cram 16.8 GB
EGAF00000322129 cram 16.2 GB
EGAF00000322130 cram 16.7 GB
EGAF00000322131 cram 16.9 GB
EGAF00000322132 cram 15.1 GB
EGAF00000322133 cram 16.8 GB
EGAF00000322134 cram 23.7 GB
EGAF00000322135 cram 17.3 GB
EGAF00000322136 cram 22.0 GB
EGAF00000322137 cram 24.5 GB
EGAF00000322138 cram 23.1 GB
EGAF00000322139 cram 16.6 GB
EGAF00000322140 cram 21.3 GB
EGAF00000322141 cram 24.7 GB
EGAF00000322142 cram 25.1 GB
EGAF00000322143 cram 25.3 GB
EGAF00000363611 cram 30.6 GB
EGAF00000363612 cram 30.6 GB
EGAF00000412416 cram 11.8 GB
EGAF00000412417 cram 13.8 GB
EGAF00000412418 cram 14.4 GB
EGAF00000412419 cram 7.8 GB
EGAF00000414579 cram 9.8 GB
EGAF00000414580 cram 18.8 GB
EGAF00000414581 cram 12.0 GB
EGAF00000414582 cram 12.4 GB
EGAF00000484696 cram 15.3 GB
EGAF00000484697 cram 16.5 GB
EGAF00000484698 cram 12.7 GB
EGAF00000484699 cram 20.9 GB
EGAF00000484700 cram 20.1 GB
EGAF00000484701 cram 18.2 GB
EGAF00000484702 cram 18.3 GB
EGAF00000484703 cram 22.4 GB
EGAF00000484704 cram 22.4 GB
EGAF00000484705 cram 23.0 GB
EGAF00000484706 cram 19.5 GB
EGAF00000484707 cram 15.8 GB
EGAF00000484708 cram 10.9 GB
EGAF00000484709 cram 13.0 GB
EGAF00000484710 cram 14.4 GB
EGAF00000484711 cram 16.3 GB
EGAF00000486788 cram 18.5 GB
EGAF00000486789 cram 18.4 GB
EGAF00000486790 cram 16.7 GB
EGAF00000486791 cram 14.1 GB
EGAF00000486792 cram 13.6 GB
EGAF00000486793 cram 13.5 GB
EGAF00000486794 cram 16.0 GB
EGAF00000486795 cram 16.1 GB
EGAF00000486796 cram 8.5 GB
EGAF00000486797 cram 9.6 GB
EGAF00000486798 cram 12.9 GB
EGAF00000486799 cram 10.6 GB
EGAF00000486800 cram 19.4 GB
EGAF00000486801 cram 19.7 GB
EGAF00000486802 cram 20.3 GB
EGAF00000486803 cram 16.5 GB
EGAF00000486804 cram 16.1 GB
EGAF00000486805 cram 16.1 GB
EGAF00000486806 cram 18.0 GB
EGAF00000486807 cram 17.9 GB
EGAF00000486808 cram 22.1 GB
EGAF00000486809 cram 17.4 GB
EGAF00000486810 cram 17.7 GB
EGAF00000486811 cram 11.9 GB
EGAF00000486812 cram 7.8 GB
EGAF00000486813 cram 14.2 GB
EGAF00000486814 cram 11.0 GB
EGAF00000490583 cram 13.2 GB
EGAF00000490584 cram 12.8 GB
EGAF00000490585 cram 13.7 GB
EGAF00000490586 cram 15.8 GB
EGAF00000490587 cram 16.0 GB
EGAF00000491461 cram 15.5 GB
EGAF00000491462 cram 15.5 GB
EGAF00000491463 cram 15.5 GB
EGAF00000491464 cram 17.7 GB
EGAF00000491465 cram 10.3 GB
EGAF00000491466 cram 14.4 GB
EGAF00000491467 cram 14.3 GB
EGAF00000491468 cram 23.1 GB
EGAF00000491469 cram 23.4 GB
EGAF00000491470 cram 23.6 GB
EGAF00000491471 cram 19.3 GB
EGAF00000491472 cram 19.1 GB
EGAF00000491473 cram 19.1 GB
EGAF00000491474 cram 24.4 GB
EGAF00000491475 cram 19.3 GB
EGAF00000496247 cram 20.2 GB
EGAF00000496248 cram 13.6 GB
EGAF00000496249 cram 13.5 GB
EGAF00000496250 cram 13.7 GB
EGAF00000496251 cram 17.3 GB
EGAF00000496252 cram 20.1 GB
EGAF00000496253 cram 21.3 GB
EGAF00000496254 cram 22.2 GB
EGAF00000496255 cram 23.1 GB
EGAF00000503722 cram 18.4 GB
EGAF00000503723 cram 14.9 GB
EGAF00000503724 cram 22.9 GB
EGAF00000503725 cram 11.7 GB
EGAF00000503726 cram 18.0 GB
EGAF00000503727 cram 8.3 GB
EGAF00000503728 cram 18.2 GB
EGAF00000503729 cram 13.3 GB
EGAF00000503730 cram 12.6 GB
EGAF00000503731 cram 9.5 GB
EGAF00000503732 cram 10.6 GB
EGAF00000503733 cram 19.1 GB
EGAF00000503734 cram 17.9 GB
EGAF00000503735 cram 19.9 GB
EGAF00000503736 cram 6.3 GB
EGAF00000503737 cram 6.9 GB
EGAF00000503738 cram 13.6 GB
EGAF00000503739 cram 12.8 GB
EGAF00000503740 cram 10.7 GB
EGAF00000503741 cram 13.8 GB
EGAF00000503742 cram 11.2 GB
EGAF00000503743 cram 17.1 GB
EGAF00000503744 cram 7.3 GB
EGAF00000503745 cram 8.6 GB
EGAF00000503746 cram 7.6 GB
EGAF00000503747 cram 10.5 GB
EGAF00000503748 cram 10.0 GB
EGAF00000503749 cram 10.0 GB
EGAF00000503750 cram 7.9 GB
EGAF00000503751 cram 12.4 GB
EGAF00000581534 cram 7.1 GB
EGAF00000581535 cram 13.8 GB
EGAF00000581536 cram 8.3 GB
EGAF00000581537 cram 11.8 GB
EGAF00000604499 cram 20.7 GB
EGAF00000604500 cram 21.0 GB
EGAF00000604501 cram 21.0 GB
EGAF00000604502 cram 20.5 GB
EGAF00000604503 cram 15.2 GB
EGAF00000604504 cram 18.1 GB
EGAF00000604505 cram 19.4 GB
EGAF00000604506 cram 18.9 GB
EGAF00000604507 cram 14.5 GB
EGAF00000604508 cram 15.5 GB
EGAF00000604509 cram 14.3 GB
EGAF00000604510 cram 18.9 GB
EGAF00000606407 cram 23.4 GB
EGAF00000606408 cram 21.1 GB
EGAF00000606409 cram 20.8 GB
EGAF00000606410 cram 18.9 GB
EGAF00000606411 cram 25.1 GB
EGAF00000607254 cram 21.5 GB
EGAF00000607284 cram 10.4 GB
EGAF00000607285 cram 10.4 GB
EGAF00000607286 cram 18.6 GB
EGAF00000607288 cram 20.3 GB
EGAF00000607289 cram 19.6 GB
EGAF00000607290 cram 10.7 GB
EGAF00000607291 cram 10.5 GB
EGAF00000607292 cram 20.8 GB
EGAF00000607293 cram 19.4 GB
EGAF00000607294 cram 19.0 GB
EGAF00000611403 cram 18.9 GB
EGAF00000611404 cram 20.4 GB
EGAF00000611405 cram 6.6 GB
EGAF00000611406 cram 13.9 GB
EGAF00000611407 cram 11.4 GB
EGAF00000611724 cram 21.2 GB
EGAF00000611731 cram 6.0 GB
EGAF00000612636 cram 23.7 GB
EGAF00000612637 cram 17.1 GB
EGAF00000612638 cram 15.5 GB
EGAF00000614805 cram 20.9 GB
EGAF00000654845 cram 26.8 GB
EGAF00000702269 cram 25.8 GB
EGAF00000702270 cram 24.8 GB
EGAF00000702271 cram 22.1 GB
472 Files (7.1 TB)