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Feasibility of targeted capture sequencing in routinely collected FFPE cancer specimens

Testing the feasibility of genome-scale sequencing in routinely collected formalin-fixed paraffin-embedded (FFPE) cancer specimens versus matched fresh-frozen samples using targeted pulldown capture prior to Illumina sequencing.

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Wellcome Trust Sanger Institute Cancer Genome Group Data Sharing Policy

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000297 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00000149860 bam 208.4 MB
EGAF00000149861 bam 250.2 MB
EGAF00000149862 bam 184.9 MB
EGAF00000149863 bam 233.8 MB
EGAF00000149864 bam 235.4 MB
EGAF00000149865 bam 202.8 MB
EGAF00000149866 bam 221.1 MB
EGAF00000149867 bam 183.0 MB
EGAF00000149868 bam 245.4 MB
EGAF00000149869 bam 234.9 MB
EGAF00000149870 bam 229.3 MB
EGAF00000149871 bam 198.2 MB
EGAF00000149872 bam 197.3 MB
EGAF00000149873 bam 273.2 MB
EGAF00000149874 bam 257.2 MB
EGAF00000149875 bam 286.8 MB
EGAF00000149876 bam 180.4 MB
EGAF00000149877 bam 252.0 MB
EGAF00000149878 bam 227.3 MB
EGAF00000149879 bam 239.5 MB
EGAF00000149880 bam 271.7 MB
EGAF00000149881 bam 281.7 MB
EGAF00000149882 bam 248.4 MB
EGAF00000149883 bam 498.6 MB
EGAF00000149884 bam 520.7 MB
EGAF00000149885 bam 555.1 MB
EGAF00000149886 bam 544.4 MB
EGAF00000149887 bam 573.0 MB
EGAF00000149888 bam 501.9 MB
EGAF00000149889 bam 596.7 MB
EGAF00000149890 bam 505.7 MB
EGAF00000149891 bam 837.4 MB
EGAF00000149892 bam 782.9 MB
EGAF00000149893 bam 664.6 MB
EGAF00000149894 bam 746.1 MB
EGAF00000149895 bam 517.9 MB
EGAF00000149896 bam 985.9 MB
EGAF00000149897 bam 253.7 MB
EGAF00000149898 bam 181.3 MB
EGAF00000149899 bam 240.7 MB
EGAF00000149900 bam 312.7 MB
EGAF00000149901 bam 274.2 MB
EGAF00000149902 bam 290.6 MB
EGAF00000149903 bam 352.2 MB
EGAF00000149904 bam 325.4 MB
EGAF00000149905 bam 314.3 MB
EGAF00000149906 bam 284.6 MB
EGAF00000149907 bam 257.1 MB
EGAF00000149908 bam 268.2 MB
EGAF00000149909 bam 267.1 MB
EGAF00000149910 bam 401.1 MB
EGAF00000149911 bam 275.1 MB
EGAF00000149912 bam 203.2 MB
EGAF00000149913 bam 226.9 MB
EGAF00000149914 bam 212.3 MB
EGAF00000149915 bam 204.9 MB
EGAF00000149916 bam 287.5 MB
EGAF00000149917 bam 278.4 MB
EGAF00000149918 bam 275.8 MB
EGAF00000149919 bam 269.5 MB
EGAF00000149920 bam 310.5 MB
EGAF00000149921 bam 259.8 MB
EGAF00000149922 bam 464.5 MB
EGAF00000149923 bam 313.4 MB
EGAF00000149924 bam 342.6 MB
EGAF00000149925 bam 269.1 MB
EGAF00000149926 bam 356.9 MB
EGAF00000149927 bam 590.3 MB
EGAF00000149928 bam 647.8 MB
EGAF00000149929 bam 324.0 MB
EGAF00000149930 bam 535.5 MB
EGAF00000149931 bam 399.4 MB
EGAF00000149932 bam 356.4 MB
EGAF00000149933 bam 368.9 MB
EGAF00000149934 bam 345.8 MB
EGAF00000149935 bam 285.3 MB
EGAF00000149936 bam 327.4 MB
EGAF00000149937 bam 210.2 MB
EGAF00000149938 bam 261.3 MB
EGAF00000149939 bam 368.3 MB
EGAF00000149940 bam 316.6 MB
EGAF00000151209 bam 214.9 MB
EGAF00000151210 bam 258.5 MB
EGAF00000151211 bam 189.8 MB
EGAF00000151212 bam 241.3 MB
EGAF00000151213 bam 242.0 MB
EGAF00000151214 bam 208.1 MB
EGAF00000151215 bam 227.9 MB
EGAF00000151216 bam 189.9 MB
EGAF00000151217 bam 252.6 MB
EGAF00000151218 bam 241.6 MB
EGAF00000151219 bam 235.5 MB
EGAF00000151220 bam 205.0 MB
EGAF00000151221 bam 203.5 MB
EGAF00000151222 bam 279.8 MB
EGAF00000151223 bam 263.9 MB
EGAF00000151224 bam 292.6 MB
EGAF00000151225 bam 185.0 MB
EGAF00000151226 bam 259.2 MB
EGAF00000151227 bam 233.6 MB
EGAF00000151228 bam 246.3 MB
EGAF00000151229 bam 279.8 MB
EGAF00000151230 bam 290.3 MB
EGAF00000151231 bam 255.8 MB
EGAF00000151232 bam 512.3 MB
EGAF00000151233 bam 537.0 MB
EGAF00000151234 bam 571.4 MB
EGAF00000151235 bam 560.5 MB
EGAF00000151236 bam 589.8 MB
EGAF00000151237 bam 516.8 MB
EGAF00000151238 bam 613.6 MB
EGAF00000151239 bam 520.4 MB
EGAF00000151240 bam 862.1 MB
EGAF00000151241 bam 805.6 MB
EGAF00000151242 bam 684.6 MB
EGAF00000151243 bam 768.2 MB
EGAF00000151244 bam 532.8 MB
EGAF00000151245 bam 1.0 GB
EGAF00000151246 bam 259.6 MB
EGAF00000151247 bam 185.6 MB
EGAF00000151248 bam 246.0 MB
EGAF00000151249 bam 317.9 MB
EGAF00000151250 bam 280.6 MB
EGAF00000151251 bam 296.8 MB
EGAF00000151252 bam 360.2 MB
EGAF00000151253 bam 332.3 MB
EGAF00000151254 bam 321.4 MB
EGAF00000151255 bam 292.0 MB
EGAF00000151256 bam 262.9 MB
EGAF00000151257 bam 274.6 MB
EGAF00000151258 bam 275.4 MB
EGAF00000151259 bam 410.7 MB
EGAF00000151260 bam 282.0 MB
EGAF00000151261 bam 208.8 MB
EGAF00000151262 bam 232.4 MB
EGAF00000151263 bam 217.7 MB
EGAF00000151264 bam 210.5 MB
EGAF00000151265 bam 294.3 MB
EGAF00000151266 bam 286.0 MB
EGAF00000151267 bam 282.0 MB
EGAF00000151268 bam 276.0 MB
EGAF00000151269 bam 316.8 MB
EGAF00000151270 bam 265.8 MB
EGAF00000151271 bam 476.0 MB
EGAF00000151272 bam 321.0 MB
EGAF00000151273 bam 351.0 MB
EGAF00000151274 bam 275.8 MB
EGAF00000151275 bam 366.1 MB
EGAF00000151276 bam 606.7 MB
EGAF00000151277 bam 661.3 MB
EGAF00000151278 bam 331.2 MB
EGAF00000151279 bam 549.3 MB
EGAF00000151280 bam 408.6 MB
EGAF00000151281 bam 365.1 MB
EGAF00000151282 bam 379.4 MB
EGAF00000151283 bam 356.6 MB
EGAF00000151284 bam 295.6 MB
EGAF00000151285 bam 336.2 MB
EGAF00000151286 bam 216.3 MB
EGAF00000151287 bam 266.8 MB
EGAF00000151288 bam 377.8 MB
EGAF00000151289 bam 323.0 MB
EGAF00000151290 bam 217.1 MB
EGAF00000151291 bam 261.3 MB
EGAF00000151292 bam 191.2 MB
EGAF00000151293 bam 243.4 MB
EGAF00000151294 bam 244.0 MB
EGAF00000151295 bam 209.9 MB
EGAF00000151296 bam 229.7 MB
EGAF00000151297 bam 191.4 MB
EGAF00000151298 bam 255.4 MB
EGAF00000151299 bam 243.8 MB
EGAF00000151300 bam 237.3 MB
EGAF00000151301 bam 206.6 MB
EGAF00000151302 bam 205.8 MB
EGAF00000151303 bam 282.4 MB
EGAF00000151304 bam 265.9 MB
EGAF00000151305 bam 294.5 MB
EGAF00000151306 bam 186.3 MB
EGAF00000151307 bam 262.2 MB
EGAF00000151308 bam 235.4 MB
EGAF00000151309 bam 248.5 MB
EGAF00000151310 bam 282.4 MB
EGAF00000151311 bam 293.3 MB
EGAF00000151312 bam 258.2 MB
EGAF00000151313 bam 518.2 MB
EGAF00000151314 bam 542.9 MB
EGAF00000151315 bam 578.0 MB
EGAF00000151316 bam 566.7 MB
EGAF00000151317 bam 596.6 MB
EGAF00000151318 bam 522.0 MB
EGAF00000151319 bam 620.3 MB
EGAF00000151320 bam 526.3 MB
EGAF00000151321 bam 871.2 MB
EGAF00000151322 bam 814.7 MB
EGAF00000151323 bam 691.0 MB
EGAF00000151324 bam 776.1 MB
EGAF00000151325 bam 539.1 MB
EGAF00000151326 bam 1.0 GB
EGAF00000151327 bam 261.5 MB
EGAF00000151328 bam 186.7 MB
EGAF00000151329 bam 248.6 MB
EGAF00000151330 bam 320.8 MB
EGAF00000151331 bam 282.3 MB
EGAF00000151332 bam 299.5 MB
EGAF00000151333 bam 363.3 MB
EGAF00000151334 bam 335.3 MB
EGAF00000151335 bam 324.7 MB
EGAF00000151336 bam 294.6 MB
EGAF00000151337 bam 265.5 MB
EGAF00000151338 bam 277.1 MB
EGAF00000151339 bam 277.3 MB
EGAF00000151340 bam 413.9 MB
EGAF00000151341 bam 283.9 MB
EGAF00000151342 bam 210.4 MB
EGAF00000151343 bam 234.7 MB
EGAF00000151344 bam 220.0 MB
EGAF00000151345 bam 212.7 MB
EGAF00000151346 bam 297.8 MB
EGAF00000151347 bam 288.6 MB
EGAF00000151348 bam 284.8 MB
EGAF00000151349 bam 278.3 MB
EGAF00000151350 bam 321.0 MB
EGAF00000151351 bam 268.6 MB
EGAF00000151352 bam 480.8 MB
EGAF00000151353 bam 324.7 MB
EGAF00000151354 bam 354.5 MB
EGAF00000151355 bam 278.6 MB
EGAF00000151356 bam 370.4 MB
EGAF00000151357 bam 613.7 MB
EGAF00000151358 bam 669.1 MB
EGAF00000151359 bam 334.7 MB
EGAF00000151360 bam 555.0 MB
EGAF00000151361 bam 412.7 MB
EGAF00000151362 bam 368.2 MB
EGAF00000151363 bam 383.2 MB
EGAF00000151364 bam 360.1 MB
EGAF00000151365 bam 298.0 MB
EGAF00000151366 bam 340.0 MB
EGAF00000151367 bam 218.5 MB
EGAF00000151368 bam 268.2 MB
EGAF00000151369 bam 381.2 MB
EGAF00000151370 bam 325.2 MB
EGAF00000164610 bam 256.7 MB
EGAF00000164611 bam 308.8 MB
EGAF00000164612 bam 230.3 MB
EGAF00000164613 bam 287.1 MB
EGAF00000164614 bam 289.4 MB
EGAF00000164615 bam 250.1 MB
EGAF00000164616 bam 273.3 MB
EGAF00000164617 bam 227.3 MB
EGAF00000164618 bam 302.9 MB
EGAF00000164619 bam 289.0 MB
EGAF00000164620 bam 286.7 MB
EGAF00000164621 bam 246.0 MB
EGAF00000164622 bam 244.1 MB
EGAF00000164623 bam 335.8 MB
EGAF00000164624 bam 317.0 MB
EGAF00000164625 bam 351.9 MB
EGAF00000164626 bam 222.4 MB
EGAF00000164627 bam 312.5 MB
EGAF00000164628 bam 279.8 MB
EGAF00000164629 bam 294.6 MB
EGAF00000164630 bam 333.4 MB
EGAF00000164631 bam 346.7 MB
EGAF00000164632 bam 304.6 MB
EGAF00000164633 bam 616.0 MB
EGAF00000164634 bam 643.1 MB
EGAF00000164635 bam 683.8 MB
EGAF00000164636 bam 671.9 MB
EGAF00000164637 bam 706.5 MB
EGAF00000164638 bam 617.8 MB
EGAF00000164639 bam 734.5 MB
EGAF00000164640 bam 623.5 MB
EGAF00000164641 bam 1.0 GB
EGAF00000164642 bam 965.4 MB
EGAF00000164643 bam 819.3 MB
EGAF00000164644 bam 922.2 MB
EGAF00000164645 bam 641.3 MB
EGAF00000164646 bam 1.2 GB
EGAF00000164647 bam 306.9 MB
EGAF00000164648 bam 220.5 MB
EGAF00000164649 bam 291.3 MB
EGAF00000164650 bam 378.7 MB
EGAF00000164651 bam 332.4 MB
EGAF00000164652 bam 352.3 MB
EGAF00000164653 bam 427.3 MB
EGAF00000164654 bam 393.0 MB
EGAF00000164655 bam 381.6 MB
EGAF00000164656 bam 348.2 MB
EGAF00000164657 bam 312.9 MB
EGAF00000164658 bam 329.7 MB
EGAF00000164659 bam 329.7 MB
EGAF00000164660 bam 488.7 MB
EGAF00000164661 bam 335.8 MB
EGAF00000164662 bam 248.6 MB
EGAF00000164663 bam 277.0 MB
EGAF00000164664 bam 260.4 MB
EGAF00000164665 bam 252.2 MB
EGAF00000164666 bam 352.4 MB
EGAF00000164667 bam 342.1 MB
EGAF00000164668 bam 337.8 MB
EGAF00000164669 bam 330.7 MB
EGAF00000164670 bam 379.5 MB
EGAF00000164671 bam 318.0 MB
EGAF00000164672 bam 570.1 MB
EGAF00000164673 bam 382.9 MB
EGAF00000164674 bam 418.1 MB
EGAF00000164675 bam 327.7 MB
EGAF00000164676 bam 437.6 MB
EGAF00000164677 bam 728.0 MB
EGAF00000164678 bam 789.9 MB
EGAF00000164679 bam 395.2 MB
EGAF00000164680 bam 655.4 MB
EGAF00000164681 bam 488.4 MB
EGAF00000164682 bam 434.2 MB
EGAF00000164683 bam 455.8 MB
EGAF00000164684 bam 427.1 MB
EGAF00000164685 bam 346.4 MB
EGAF00000164686 bam 402.9 MB
EGAF00000164687 bam 259.4 MB
EGAF00000164688 bam 319.8 MB
EGAF00000164689 bam 453.0 MB
EGAF00000164690 bam 384.8 MB
EGAF00000164691 bam 251.5 MB
EGAF00000164692 bam 302.4 MB
EGAF00000164693 bam 225.8 MB
EGAF00000164694 bam 281.4 MB
EGAF00000164695 bam 283.9 MB
EGAF00000164696 bam 245.7 MB
EGAF00000164697 bam 267.9 MB
EGAF00000164698 bam 222.6 MB
EGAF00000164699 bam 296.9 MB
EGAF00000164700 bam 283.1 MB
EGAF00000164701 bam 281.0 MB
EGAF00000164702 bam 240.8 MB
EGAF00000164703 bam 239.4 MB
EGAF00000164704 bam 329.6 MB
EGAF00000164705 bam 311.3 MB
EGAF00000164706 bam 345.3 MB
EGAF00000164707 bam 218.0 MB
EGAF00000164708 bam 305.6 MB
EGAF00000164709 bam 274.2 MB
EGAF00000164710 bam 288.4 MB
EGAF00000164711 bam 326.5 MB
EGAF00000164712 bam 339.3 MB
EGAF00000164713 bam 298.5 MB
EGAF00000164714 bam 601.1 MB
EGAF00000164715 bam 628.4 MB
EGAF00000164716 bam 667.6 MB
EGAF00000164717 bam 655.9 MB
EGAF00000164718 bam 689.8 MB
EGAF00000164719 bam 603.7 MB
EGAF00000164720 bam 717.7 MB
EGAF00000164721 bam 608.8 MB
EGAF00000164722 bam 1.0 GB
EGAF00000164723 bam 942.9 MB
EGAF00000164724 bam 800.6 MB
EGAF00000164725 bam 901.1 MB
EGAF00000164726 bam 626.8 MB
EGAF00000164727 bam 1.2 GB
EGAF00000164728 bam 300.8 MB
EGAF00000164729 bam 215.9 MB
EGAF00000164730 bam 284.6 MB
EGAF00000164731 bam 369.6 MB
EGAF00000164732 bam 325.6 MB
EGAF00000164733 bam 344.9 MB
EGAF00000164734 bam 417.6 MB
EGAF00000164735 bam 384.1 MB
EGAF00000164736 bam 373.3 MB
EGAF00000164737 bam 340.7 MB
EGAF00000164738 bam 306.2 MB
EGAF00000164739 bam 322.9 MB
EGAF00000164740 bam 322.5 MB
EGAF00000164741 bam 477.7 MB
EGAF00000164742 bam 329.2 MB
EGAF00000164743 bam 243.2 MB
EGAF00000164744 bam 270.8 MB
EGAF00000164745 bam 254.4 MB
EGAF00000164746 bam 247.6 MB
EGAF00000164747 bam 344.8 MB
EGAF00000164748 bam 334.4 MB
EGAF00000164749 bam 330.4 MB
EGAF00000164750 bam 323.1 MB
EGAF00000164751 bam 371.3 MB
EGAF00000164752 bam 311.4 MB
EGAF00000164753 bam 557.8 MB
EGAF00000164754 bam 374.8 MB
EGAF00000164755 bam 409.1 MB
EGAF00000164756 bam 321.1 MB
EGAF00000164757 bam 428.0 MB
EGAF00000164758 bam 711.1 MB
EGAF00000164759 bam 772.8 MB
EGAF00000164760 bam 386.2 MB
EGAF00000164761 bam 641.8 MB
EGAF00000164762 bam 477.6 MB
EGAF00000164763 bam 424.4 MB
EGAF00000164764 bam 445.5 MB
EGAF00000164765 bam 417.7 MB
EGAF00000164766 bam 339.0 MB
EGAF00000164767 bam 393.5 MB
EGAF00000164768 bam 254.5 MB
EGAF00000164769 bam 312.8 MB
EGAF00000164770 bam 443.3 MB
EGAF00000164771 bam 376.6 MB
EGAF00000164772 bam 253.7 MB
EGAF00000164773 bam 304.5 MB
EGAF00000164774 bam 227.7 MB
EGAF00000164775 bam 283.2 MB
EGAF00000164776 bam 286.1 MB
EGAF00000164777 bam 247.4 MB
EGAF00000164778 bam 269.8 MB
EGAF00000164779 bam 224.7 MB
EGAF00000164780 bam 299.1 MB
EGAF00000164781 bam 285.4 MB
EGAF00000164782 bam 283.0 MB
EGAF00000164783 bam 242.8 MB
EGAF00000164784 bam 241.8 MB
EGAF00000164785 bam 332.3 MB
EGAF00000164786 bam 313.4 MB
EGAF00000164787 bam 348.0 MB
EGAF00000164788 bam 219.5 MB
EGAF00000164789 bam 307.8 MB
EGAF00000164790 bam 276.3 MB
EGAF00000164791 bam 290.8 MB
EGAF00000164792 bam 328.3 MB
EGAF00000164793 bam 341.9 MB
EGAF00000164794 bam 300.4 MB
EGAF00000164795 bam 604.6 MB
EGAF00000164796 bam 632.5 MB
EGAF00000164797 bam 672.5 MB
EGAF00000164798 bam 661.4 MB
EGAF00000164799 bam 694.4 MB
EGAF00000164800 bam 608.2 MB
EGAF00000164801 bam 722.4 MB
EGAF00000164802 bam 613.1 MB
EGAF00000164803 bam 1.0 GB
EGAF00000164804 bam 950.2 MB
EGAF00000164805 bam 806.1 MB
EGAF00000164806 bam 907.7 MB
EGAF00000164807 bam 630.1 MB
EGAF00000164808 bam 1.2 GB
EGAF00000164809 bam 303.4 MB
EGAF00000164810 bam 217.4 MB
EGAF00000164811 bam 287.2 MB
EGAF00000164812 bam 372.6 MB
EGAF00000164813 bam 328.2 MB
EGAF00000164814 bam 347.6 MB
EGAF00000164815 bam 420.7 MB
EGAF00000164816 bam 387.4 MB
EGAF00000164817 bam 376.2 MB
EGAF00000164818 bam 343.4 MB
EGAF00000164819 bam 308.5 MB
EGAF00000164820 bam 325.2 MB
EGAF00000164821 bam 325.5 MB
EGAF00000164822 bam 482.3 MB
EGAF00000164823 bam 331.2 MB
EGAF00000164824 bam 245.5 MB
EGAF00000164825 bam 273.3 MB
EGAF00000164826 bam 256.5 MB
EGAF00000164827 bam 249.2 MB
EGAF00000164828 bam 347.1 MB
EGAF00000164829 bam 337.0 MB
EGAF00000164830 bam 332.4 MB
EGAF00000164831 bam 325.7 MB
EGAF00000164832 bam 373.9 MB
EGAF00000164833 bam 313.6 MB
EGAF00000164834 bam 562.0 MB
EGAF00000164835 bam 377.3 MB
EGAF00000164836 bam 412.1 MB
EGAF00000164837 bam 323.4 MB
EGAF00000164838 bam 430.6 MB
EGAF00000164839 bam 716.0 MB
EGAF00000164840 bam 779.3 MB
EGAF00000164841 bam 389.0 MB
EGAF00000164842 bam 646.1 MB
EGAF00000164843 bam 481.2 MB
EGAF00000164844 bam 427.8 MB
EGAF00000164845 bam 449.5 MB
EGAF00000164846 bam 420.2 MB
EGAF00000164847 bam 341.2 MB
EGAF00000164848 bam 396.6 MB
EGAF00000164849 bam 256.2 MB
EGAF00000164850 bam 315.9 MB
EGAF00000164851 bam 446.8 MB
EGAF00000164852 bam 379.5 MB
486 Files (188.3 GB)