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Feasibility of targeted capture sequencing in routinely collected FFPE cancer specimens

Testing the feasibility of genome-scale sequencing in routinely collected formalin-fixed paraffin-embedded (FFPE) cancer specimens versus matched fresh-frozen samples using targeted pulldown capture prior to Illumina sequencing.

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Wellcome Trust Sanger Institute Cancer Genome Group Data Sharing Policy

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00000149860 bam 208.0 MB
EGAF00000149861 bam 249.7 MB
EGAF00000149862 bam 184.5 MB
EGAF00000149863 bam 233.3 MB
EGAF00000149864 bam 234.9 MB
EGAF00000149865 bam 202.4 MB
EGAF00000149866 bam 220.7 MB
EGAF00000149867 bam 182.7 MB
EGAF00000149868 bam 244.9 MB
EGAF00000149869 bam 234.4 MB
EGAF00000149870 bam 228.8 MB
EGAF00000149871 bam 197.8 MB
EGAF00000149872 bam 196.9 MB
EGAF00000149873 bam 272.6 MB
EGAF00000149874 bam 256.7 MB
EGAF00000149875 bam 286.2 MB
EGAF00000149876 bam 180.0 MB
EGAF00000149877 bam 251.4 MB
EGAF00000149878 bam 226.8 MB
EGAF00000149879 bam 239.0 MB
EGAF00000149880 bam 271.2 MB
EGAF00000149881 bam 281.1 MB
EGAF00000149882 bam 247.9 MB
EGAF00000149883 bam 497.7 MB
EGAF00000149884 bam 519.7 MB
EGAF00000149885 bam 554.0 MB
EGAF00000149886 bam 543.3 MB
EGAF00000149887 bam 571.9 MB
EGAF00000149888 bam 500.9 MB
EGAF00000149889 bam 595.6 MB
EGAF00000149890 bam 504.8 MB
EGAF00000149891 bam 835.8 MB
EGAF00000149892 bam 781.3 MB
EGAF00000149893 bam 663.3 MB
EGAF00000149894 bam 744.6 MB
EGAF00000149895 bam 516.8 MB
EGAF00000149896 bam 983.8 MB
EGAF00000149897 bam 253.2 MB
EGAF00000149898 bam 180.9 MB
EGAF00000149899 bam 240.3 MB
EGAF00000149900 bam 312.1 MB
EGAF00000149901 bam 273.7 MB
EGAF00000149902 bam 290.0 MB
EGAF00000149903 bam 351.5 MB
EGAF00000149904 bam 324.7 MB
EGAF00000149905 bam 313.7 MB
EGAF00000149906 bam 284.0 MB
EGAF00000149907 bam 256.6 MB
EGAF00000149908 bam 267.6 MB
EGAF00000149909 bam 266.6 MB
EGAF00000149910 bam 400.3 MB
EGAF00000149911 bam 274.6 MB
EGAF00000149912 bam 202.8 MB
EGAF00000149913 bam 226.5 MB
EGAF00000149914 bam 211.9 MB
EGAF00000149915 bam 204.5 MB
EGAF00000149916 bam 286.9 MB
EGAF00000149917 bam 277.9 MB
EGAF00000149918 bam 275.3 MB
EGAF00000149919 bam 269.0 MB
EGAF00000149920 bam 309.9 MB
EGAF00000149921 bam 259.3 MB
EGAF00000149922 bam 463.6 MB
EGAF00000149923 bam 312.8 MB
EGAF00000149924 bam 341.9 MB
EGAF00000149925 bam 268.6 MB
EGAF00000149926 bam 356.2 MB
EGAF00000149927 bam 589.1 MB
EGAF00000149928 bam 646.6 MB
EGAF00000149929 bam 323.4 MB
EGAF00000149930 bam 534.5 MB
EGAF00000149931 bam 398.6 MB
EGAF00000149932 bam 355.7 MB
EGAF00000149933 bam 368.2 MB
EGAF00000149934 bam 345.2 MB
EGAF00000149935 bam 284.7 MB
EGAF00000149936 bam 326.8 MB
EGAF00000149937 bam 209.7 MB
EGAF00000149938 bam 260.8 MB
EGAF00000149939 bam 367.6 MB
EGAF00000149940 bam 316.0 MB
EGAF00000151209 bam 214.4 MB
EGAF00000151210 bam 258.0 MB
EGAF00000151211 bam 189.5 MB
EGAF00000151212 bam 240.8 MB
EGAF00000151213 bam 241.4 MB
EGAF00000151214 bam 207.6 MB
EGAF00000151215 bam 227.4 MB
EGAF00000151216 bam 189.5 MB
EGAF00000151217 bam 252.1 MB
EGAF00000151218 bam 241.1 MB
EGAF00000151219 bam 235.0 MB
EGAF00000151220 bam 204.6 MB
EGAF00000151221 bam 203.1 MB
EGAF00000151222 bam 279.2 MB
EGAF00000151223 bam 263.3 MB
EGAF00000151224 bam 292.0 MB
EGAF00000151225 bam 184.6 MB
EGAF00000151226 bam 258.7 MB
EGAF00000151227 bam 233.1 MB
EGAF00000151228 bam 245.8 MB
EGAF00000151229 bam 279.2 MB
EGAF00000151230 bam 289.7 MB
EGAF00000151231 bam 255.3 MB
EGAF00000151232 bam 511.4 MB
EGAF00000151233 bam 535.9 MB
EGAF00000151234 bam 570.3 MB
EGAF00000151235 bam 559.4 MB
EGAF00000151236 bam 588.7 MB
EGAF00000151237 bam 515.8 MB
EGAF00000151238 bam 612.5 MB
EGAF00000151239 bam 519.4 MB
EGAF00000151240 bam 860.4 MB
EGAF00000151241 bam 804.0 MB
EGAF00000151242 bam 683.3 MB
EGAF00000151243 bam 766.6 MB
EGAF00000151244 bam 531.7 MB
EGAF00000151245 bam 1.0 GB
EGAF00000151246 bam 259.0 MB
EGAF00000151247 bam 185.2 MB
EGAF00000151248 bam 245.5 MB
EGAF00000151249 bam 317.3 MB
EGAF00000151250 bam 280.0 MB
EGAF00000151251 bam 296.2 MB
EGAF00000151252 bam 359.5 MB
EGAF00000151253 bam 331.6 MB
EGAF00000151254 bam 320.8 MB
EGAF00000151255 bam 291.4 MB
EGAF00000151256 bam 262.4 MB
EGAF00000151257 bam 274.1 MB
EGAF00000151258 bam 274.9 MB
EGAF00000151259 bam 409.8 MB
EGAF00000151260 bam 281.5 MB
EGAF00000151261 bam 208.4 MB
EGAF00000151262 bam 232.0 MB
EGAF00000151263 bam 217.3 MB
EGAF00000151264 bam 210.1 MB
EGAF00000151265 bam 293.7 MB
EGAF00000151266 bam 285.5 MB
EGAF00000151267 bam 281.4 MB
EGAF00000151268 bam 275.5 MB
EGAF00000151269 bam 316.2 MB
EGAF00000151270 bam 265.3 MB
EGAF00000151271 bam 475.1 MB
EGAF00000151272 bam 320.4 MB
EGAF00000151273 bam 350.3 MB
EGAF00000151274 bam 275.3 MB
EGAF00000151275 bam 365.4 MB
EGAF00000151276 bam 605.5 MB
EGAF00000151277 bam 660.0 MB
EGAF00000151278 bam 330.5 MB
EGAF00000151279 bam 548.2 MB
EGAF00000151280 bam 407.8 MB
EGAF00000151281 bam 364.3 MB
EGAF00000151282 bam 378.7 MB
EGAF00000151283 bam 355.9 MB
EGAF00000151284 bam 295.0 MB
EGAF00000151285 bam 335.6 MB
EGAF00000151286 bam 215.8 MB
EGAF00000151287 bam 266.3 MB
EGAF00000151288 bam 377.1 MB
EGAF00000151289 bam 322.3 MB
EGAF00000151290 bam 216.6 MB
EGAF00000151291 bam 260.7 MB
EGAF00000151292 bam 190.8 MB
EGAF00000151293 bam 242.9 MB
EGAF00000151294 bam 243.4 MB
EGAF00000151295 bam 209.5 MB
EGAF00000151296 bam 229.3 MB
EGAF00000151297 bam 191.0 MB
EGAF00000151298 bam 254.9 MB
EGAF00000151299 bam 243.3 MB
EGAF00000151300 bam 236.8 MB
EGAF00000151301 bam 206.1 MB
EGAF00000151302 bam 205.4 MB
EGAF00000151303 bam 281.8 MB
EGAF00000151304 bam 265.4 MB
EGAF00000151305 bam 293.9 MB
EGAF00000151306 bam 185.9 MB
EGAF00000151307 bam 261.7 MB
EGAF00000151308 bam 234.9 MB
EGAF00000151309 bam 248.0 MB
EGAF00000151310 bam 281.8 MB
EGAF00000151311 bam 292.7 MB
EGAF00000151312 bam 257.6 MB
EGAF00000151313 bam 517.3 MB
EGAF00000151314 bam 541.9 MB
EGAF00000151315 bam 576.9 MB
EGAF00000151316 bam 565.6 MB
EGAF00000151317 bam 595.5 MB
EGAF00000151318 bam 521.0 MB
EGAF00000151319 bam 619.1 MB
EGAF00000151320 bam 525.3 MB
EGAF00000151321 bam 869.5 MB
EGAF00000151322 bam 813.1 MB
EGAF00000151323 bam 689.7 MB
EGAF00000151324 bam 774.5 MB
EGAF00000151325 bam 538.0 MB
EGAF00000151326 bam 1.0 GB
EGAF00000151327 bam 261.0 MB
EGAF00000151328 bam 186.4 MB
EGAF00000151329 bam 248.1 MB
EGAF00000151330 bam 320.2 MB
EGAF00000151331 bam 281.7 MB
EGAF00000151332 bam 298.9 MB
EGAF00000151333 bam 362.6 MB
EGAF00000151334 bam 334.6 MB
EGAF00000151335 bam 324.1 MB
EGAF00000151336 bam 294.0 MB
EGAF00000151337 bam 265.0 MB
EGAF00000151338 bam 276.5 MB
EGAF00000151339 bam 276.8 MB
EGAF00000151340 bam 413.1 MB
EGAF00000151341 bam 283.3 MB
EGAF00000151342 bam 210.0 MB
EGAF00000151343 bam 234.2 MB
EGAF00000151344 bam 219.5 MB
EGAF00000151345 bam 212.3 MB
EGAF00000151346 bam 297.2 MB
EGAF00000151347 bam 288.0 MB
EGAF00000151348 bam 284.2 MB
EGAF00000151349 bam 277.8 MB
EGAF00000151350 bam 320.4 MB
EGAF00000151351 bam 268.1 MB
EGAF00000151352 bam 479.9 MB
EGAF00000151353 bam 324.0 MB
EGAF00000151354 bam 353.8 MB
EGAF00000151355 bam 278.0 MB
EGAF00000151356 bam 369.7 MB
EGAF00000151357 bam 612.5 MB
EGAF00000151358 bam 667.8 MB
EGAF00000151359 bam 334.1 MB
EGAF00000151360 bam 553.9 MB
EGAF00000151361 bam 411.9 MB
EGAF00000151362 bam 367.5 MB
EGAF00000151363 bam 382.5 MB
EGAF00000151364 bam 359.4 MB
EGAF00000151365 bam 297.4 MB
EGAF00000151366 bam 339.3 MB
EGAF00000151367 bam 218.1 MB
EGAF00000151368 bam 267.7 MB
EGAF00000151369 bam 380.5 MB
EGAF00000151370 bam 324.6 MB
EGAF00000164610 bam 256.2 MB
EGAF00000164611 bam 308.1 MB
EGAF00000164612 bam 229.8 MB
EGAF00000164613 bam 286.5 MB
EGAF00000164614 bam 288.8 MB
EGAF00000164615 bam 249.6 MB
EGAF00000164616 bam 272.7 MB
EGAF00000164617 bam 226.9 MB
EGAF00000164618 bam 302.3 MB
EGAF00000164619 bam 288.4 MB
EGAF00000164620 bam 286.2 MB
EGAF00000164621 bam 245.5 MB
EGAF00000164622 bam 243.6 MB
EGAF00000164623 bam 335.2 MB
EGAF00000164624 bam 316.3 MB
EGAF00000164625 bam 351.2 MB
EGAF00000164626 bam 221.9 MB
EGAF00000164627 bam 311.9 MB
EGAF00000164628 bam 279.2 MB
EGAF00000164629 bam 294.0 MB
EGAF00000164630 bam 332.7 MB
EGAF00000164631 bam 346.0 MB
EGAF00000164632 bam 304.0 MB
EGAF00000164633 bam 614.8 MB
EGAF00000164634 bam 641.9 MB
EGAF00000164635 bam 682.5 MB
EGAF00000164636 bam 670.6 MB
EGAF00000164637 bam 705.1 MB
EGAF00000164638 bam 616.6 MB
EGAF00000164639 bam 733.0 MB
EGAF00000164640 bam 622.3 MB
EGAF00000164641 bam 1.0 GB
EGAF00000164642 bam 963.5 MB
EGAF00000164643 bam 817.7 MB
EGAF00000164644 bam 920.4 MB
EGAF00000164645 bam 640.0 MB
EGAF00000164646 bam 1.2 GB
EGAF00000164647 bam 306.3 MB
EGAF00000164648 bam 220.1 MB
EGAF00000164649 bam 290.7 MB
EGAF00000164650 bam 377.9 MB
EGAF00000164651 bam 331.7 MB
EGAF00000164652 bam 351.6 MB
EGAF00000164653 bam 426.5 MB
EGAF00000164654 bam 392.2 MB
EGAF00000164655 bam 380.9 MB
EGAF00000164656 bam 347.5 MB
EGAF00000164657 bam 312.3 MB
EGAF00000164658 bam 329.0 MB
EGAF00000164659 bam 329.0 MB
EGAF00000164660 bam 487.8 MB
EGAF00000164661 bam 335.2 MB
EGAF00000164662 bam 248.1 MB
EGAF00000164663 bam 276.4 MB
EGAF00000164664 bam 259.8 MB
EGAF00000164665 bam 251.7 MB
EGAF00000164666 bam 351.8 MB
EGAF00000164667 bam 341.4 MB
EGAF00000164668 bam 337.1 MB
EGAF00000164669 bam 330.1 MB
EGAF00000164670 bam 378.8 MB
EGAF00000164671 bam 317.4 MB
EGAF00000164672 bam 569.0 MB
EGAF00000164673 bam 382.1 MB
EGAF00000164674 bam 417.3 MB
EGAF00000164675 bam 327.1 MB
EGAF00000164676 bam 436.7 MB
EGAF00000164677 bam 726.6 MB
EGAF00000164678 bam 788.3 MB
EGAF00000164679 bam 394.4 MB
EGAF00000164680 bam 654.1 MB
EGAF00000164681 bam 487.5 MB
EGAF00000164682 bam 433.4 MB
EGAF00000164683 bam 454.9 MB
EGAF00000164684 bam 426.3 MB
EGAF00000164685 bam 345.7 MB
EGAF00000164686 bam 402.1 MB
EGAF00000164687 bam 258.9 MB
EGAF00000164688 bam 319.1 MB
EGAF00000164689 bam 452.1 MB
EGAF00000164690 bam 384.1 MB
EGAF00000164691 bam 251.0 MB
EGAF00000164692 bam 301.8 MB
EGAF00000164693 bam 225.3 MB
EGAF00000164694 bam 280.8 MB
EGAF00000164695 bam 283.3 MB
EGAF00000164696 bam 245.2 MB
EGAF00000164697 bam 267.3 MB
EGAF00000164698 bam 222.1 MB
EGAF00000164699 bam 296.3 MB
EGAF00000164700 bam 282.5 MB
EGAF00000164701 bam 280.4 MB
EGAF00000164702 bam 240.3 MB
EGAF00000164703 bam 238.9 MB
EGAF00000164704 bam 328.9 MB
EGAF00000164705 bam 310.6 MB
EGAF00000164706 bam 344.6 MB
EGAF00000164707 bam 217.5 MB
EGAF00000164708 bam 304.9 MB
EGAF00000164709 bam 273.6 MB
EGAF00000164710 bam 287.8 MB
EGAF00000164711 bam 325.8 MB
EGAF00000164712 bam 338.6 MB
EGAF00000164713 bam 297.9 MB
EGAF00000164714 bam 599.9 MB
EGAF00000164715 bam 627.2 MB
EGAF00000164716 bam 666.3 MB
EGAF00000164717 bam 654.7 MB
EGAF00000164718 bam 688.5 MB
EGAF00000164719 bam 602.5 MB
EGAF00000164720 bam 716.3 MB
EGAF00000164721 bam 607.6 MB
EGAF00000164722 bam 1.0 GB
EGAF00000164723 bam 941.1 MB
EGAF00000164724 bam 799.0 MB
EGAF00000164725 bam 899.3 MB
EGAF00000164726 bam 625.5 MB
EGAF00000164727 bam 1.2 GB
EGAF00000164728 bam 300.2 MB
EGAF00000164729 bam 215.5 MB
EGAF00000164730 bam 284.0 MB
EGAF00000164731 bam 368.9 MB
EGAF00000164732 bam 325.0 MB
EGAF00000164733 bam 344.3 MB
EGAF00000164734 bam 416.8 MB
EGAF00000164735 bam 383.3 MB
EGAF00000164736 bam 372.6 MB
EGAF00000164737 bam 340.0 MB
EGAF00000164738 bam 305.6 MB
EGAF00000164739 bam 322.3 MB
EGAF00000164740 bam 321.8 MB
EGAF00000164741 bam 476.7 MB
EGAF00000164742 bam 328.5 MB
EGAF00000164743 bam 242.7 MB
EGAF00000164744 bam 270.3 MB
EGAF00000164745 bam 253.9 MB
EGAF00000164746 bam 247.2 MB
EGAF00000164747 bam 344.1 MB
EGAF00000164748 bam 333.8 MB
EGAF00000164749 bam 329.8 MB
EGAF00000164750 bam 322.5 MB
EGAF00000164751 bam 370.6 MB
EGAF00000164752 bam 310.8 MB
EGAF00000164753 bam 556.7 MB
EGAF00000164754 bam 374.1 MB
EGAF00000164755 bam 408.3 MB
EGAF00000164756 bam 320.5 MB
EGAF00000164757 bam 427.2 MB
EGAF00000164758 bam 709.7 MB
EGAF00000164759 bam 771.3 MB
EGAF00000164760 bam 385.5 MB
EGAF00000164761 bam 640.6 MB
EGAF00000164762 bam 476.6 MB
EGAF00000164763 bam 423.6 MB
EGAF00000164764 bam 444.7 MB
EGAF00000164765 bam 416.9 MB
EGAF00000164766 bam 338.4 MB
EGAF00000164767 bam 392.7 MB
EGAF00000164768 bam 254.0 MB
EGAF00000164769 bam 312.2 MB
EGAF00000164770 bam 442.5 MB
EGAF00000164771 bam 375.9 MB
EGAF00000164772 bam 253.2 MB
EGAF00000164773 bam 303.8 MB
EGAF00000164774 bam 227.2 MB
EGAF00000164775 bam 282.6 MB
EGAF00000164776 bam 285.5 MB
EGAF00000164777 bam 246.9 MB
EGAF00000164778 bam 269.2 MB
EGAF00000164779 bam 224.2 MB
EGAF00000164780 bam 298.5 MB
EGAF00000164781 bam 284.8 MB
EGAF00000164782 bam 282.4 MB
EGAF00000164783 bam 242.3 MB
EGAF00000164784 bam 241.3 MB
EGAF00000164785 bam 331.6 MB
EGAF00000164786 bam 312.8 MB
EGAF00000164787 bam 347.3 MB
EGAF00000164788 bam 219.0 MB
EGAF00000164789 bam 307.2 MB
EGAF00000164790 bam 275.7 MB
EGAF00000164791 bam 290.2 MB
EGAF00000164792 bam 327.6 MB
EGAF00000164793 bam 341.2 MB
EGAF00000164794 bam 299.8 MB
EGAF00000164795 bam 603.4 MB
EGAF00000164796 bam 631.3 MB
EGAF00000164797 bam 671.2 MB
EGAF00000164798 bam 660.1 MB
EGAF00000164799 bam 693.1 MB
EGAF00000164800 bam 607.1 MB
EGAF00000164801 bam 721.0 MB
EGAF00000164802 bam 611.9 MB
EGAF00000164803 bam 1.0 GB
EGAF00000164804 bam 948.3 MB
EGAF00000164805 bam 804.5 MB
EGAF00000164806 bam 905.9 MB
EGAF00000164807 bam 628.8 MB
EGAF00000164808 bam 1.2 GB
EGAF00000164809 bam 302.8 MB
EGAF00000164810 bam 217.0 MB
EGAF00000164811 bam 286.7 MB
EGAF00000164812 bam 371.9 MB
EGAF00000164813 bam 327.5 MB
EGAF00000164814 bam 346.9 MB
EGAF00000164815 bam 419.9 MB
EGAF00000164816 bam 386.6 MB
EGAF00000164817 bam 375.4 MB
EGAF00000164818 bam 342.8 MB
EGAF00000164819 bam 307.9 MB
EGAF00000164820 bam 324.6 MB
EGAF00000164821 bam 324.8 MB
EGAF00000164822 bam 481.4 MB
EGAF00000164823 bam 330.6 MB
EGAF00000164824 bam 245.0 MB
EGAF00000164825 bam 272.8 MB
EGAF00000164826 bam 256.0 MB
EGAF00000164827 bam 248.7 MB
EGAF00000164828 bam 346.4 MB
EGAF00000164829 bam 336.4 MB
EGAF00000164830 bam 331.8 MB
EGAF00000164831 bam 325.0 MB
EGAF00000164832 bam 373.2 MB
EGAF00000164833 bam 313.0 MB
EGAF00000164834 bam 560.9 MB
EGAF00000164835 bam 376.5 MB
EGAF00000164836 bam 411.3 MB
EGAF00000164837 bam 322.8 MB
EGAF00000164838 bam 429.8 MB
EGAF00000164839 bam 714.6 MB
EGAF00000164840 bam 777.8 MB
EGAF00000164841 bam 388.2 MB
EGAF00000164842 bam 644.9 MB
EGAF00000164843 bam 480.3 MB
EGAF00000164844 bam 427.0 MB
EGAF00000164845 bam 448.6 MB
EGAF00000164846 bam 419.4 MB
EGAF00000164847 bam 340.6 MB
EGAF00000164848 bam 395.8 MB
EGAF00000164849 bam 255.7 MB
EGAF00000164850 bam 315.2 MB
EGAF00000164851 bam 445.9 MB
EGAF00000164852 bam 378.7 MB
486 Files (187.9 GB)