Melanoma-Til Study RNAseq
In this study, mutations present in a series of human melanomas (stage IV disease) will be determined, using autologous blood cells to obtain a reference genome. From each of the samples that are analyzed, tumour-infiltrating T lymphocytes have also been isolated. This offers a unique opportunity to determine which (fraction of) mutations in human cancer leads to epitopes that are recognized by T cells. The resulting information is likely to be of value to understand how T cell activating drugs exert their action.
- 27/05/2015
- 22 samples
- DAC: EGAC00001000000
- Technology: Illumina HiSeq 2000
- PUB DUO:0000019 (version: 2021-02-23)publication requiredThis data use modifier indicates that requestor agrees to make results of studies using the data available to the larger scientific community.
- US DUO:0000026 (version: 2021-02-23)user specific restrictionThis data use modifier indicates that use is limited to use by approved users.
- IS DUO:0000028 (version: 2021-02-23)institution specific restrictionThis data use modifier indicates that use is limited to use within an approved institution.
- GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.
Wellcome Trust Sanger Institute Cancer Genome Group Data Sharing Policy
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00000161250 | bam | 20.7 GB | ||
| EGAF00000161251 | bam | 21.7 GB | ||
| EGAF00000161252 | bam | 19.5 GB | ||
| EGAF00000161253 | bam | 18.4 GB | ||
| EGAF00000161254 | bam | 17.8 GB | ||
| EGAF00000161255 | bam | 14.3 GB | ||
| EGAF00000161256 | bam | 15.8 GB | ||
| EGAF00000161257 | bam | 31.6 GB | ||
| EGAF00000161258 | bam | 12.0 GB | ||
| EGAF00000161259 | bam | 18.2 GB | ||
| EGAF00000161260 | bam | 12.2 GB | ||
| EGAF00000239193 | bam | 12.8 GB | ||
| EGAF00000239194 | bam | 11.7 GB | ||
| EGAF00000239195 | bam | 9.8 GB | ||
| EGAF00000239196 | bam | 15.6 GB | ||
| EGAF00000239197 | bam | 13.9 GB | ||
| EGAF00000239198 | bam | 9.2 GB | ||
| EGAF00000239199 | bam | 10.6 GB | ||
| EGAF00000239200 | bam | 10.8 GB | ||
| EGAF00000248894 | bam | 11.3 GB | ||
| EGAF00000248895 | bam | 16.0 GB | ||
| EGAF00000248896 | bam | 23.3 GB | ||
| 22 Files (347.3 GB) | ||||