SCAT_Osteosarcoma_Validation
This experiment is to validate putative somatic substitutions and indels identified in an exome screen of ~50 osteosarcoma tumour/normal pairs. It is the first stage in our ICGC commitment to study osteosarcoma. The validation process is an important component of our analysis to clarify the data prior to looking for evidence of new cancer genes, or subverted pathways important in the development of cancer. This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see http://www.sanger.ac.uk/datasharing/
- 27/05/2015
- 112 samples
- DAC: EGAC00001000010
- Technology: Illumina HiSeq 2000
http://www.icgc.org/icgc/goals-structure-policies-guidelines/e1-informed-consent-access-and-ethical-oversight
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
Study ID | Study Title | Study Type |
---|---|---|
EGAS00001000196 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
ID | File Type | Size | Located in | |
---|---|---|---|---|
EGAF00000137602 | bam | 302.5 MB | ||
EGAF00000137603 | bam | 232.0 MB | ||
EGAF00000137604 | bam | 385.9 MB | ||
EGAF00000137605 | bam | 274.8 MB | ||
EGAF00000137606 | bam | 263.5 MB | ||
EGAF00000137607 | bam | 272.5 MB | ||
EGAF00000137608 | bam | 217.8 MB | ||
EGAF00000137609 | bam | 283.4 MB | ||
EGAF00000137610 | bam | 271.0 MB | ||
EGAF00000137611 | bam | 392.2 MB | ||
EGAF00000137612 | bam | 253.9 MB | ||
EGAF00000137613 | bam | 254.7 MB | ||
EGAF00000137614 | bam | 329.7 MB | ||
EGAF00000137615 | bam | 381.0 MB | ||
EGAF00000137616 | bam | 419.8 MB | ||
EGAF00000137617 | bam | 354.8 MB | ||
EGAF00000137618 | bam | 338.6 MB | ||
EGAF00000137619 | bam | 216.1 MB | ||
EGAF00000137620 | bam | 257.7 MB | ||
EGAF00000137621 | bam | 488.0 MB | ||
EGAF00000137622 | bam | 148.2 MB | ||
EGAF00000137623 | bam | 295.8 MB | ||
EGAF00000137624 | bam | 901.3 MB | ||
EGAF00000137625 | bam | 171.9 MB | ||
EGAF00000137626 | bam | 144.8 MB | ||
EGAF00000137627 | bam | 267.7 MB | ||
EGAF00000137628 | bam | 281.1 MB | ||
EGAF00000137629 | bam | 247.5 MB | ||
EGAF00000137630 | bam | 128.4 MB | ||
EGAF00000137631 | bam | 251.2 MB | ||
EGAF00000137632 | bam | 468.1 MB | ||
EGAF00000137633 | bam | 77.9 MB | ||
EGAF00000137634 | bam | 76.0 MB | ||
EGAF00000137635 | bam | 387.6 MB | ||
EGAF00000137636 | bam | 363.7 MB | ||
EGAF00000137637 | bam | 270.1 MB | ||
EGAF00000137638 | bam | 262.3 MB | ||
EGAF00000137639 | bam | 128.1 MB | ||
EGAF00000137640 | bam | 195.8 MB | ||
EGAF00000137641 | bam | 274.0 MB | ||
EGAF00000137642 | bam | 242.3 MB | ||
EGAF00000137643 | bam | 262.9 MB | ||
EGAF00000137644 | bam | 269.3 MB | ||
EGAF00000137645 | bam | 250.0 MB | ||
EGAF00000137646 | bam | 270.2 MB | ||
EGAF00000137647 | bam | 304.0 MB | ||
EGAF00000137648 | bam | 298.4 MB | ||
EGAF00000137649 | bam | 327.9 MB | ||
EGAF00000137650 | bam | 349.3 MB | ||
EGAF00000137651 | bam | 317.6 MB | ||
EGAF00000137652 | bam | 290.7 MB | ||
EGAF00000137653 | bam | 301.8 MB | ||
EGAF00000137654 | bam | 337.1 MB | ||
EGAF00000137655 | bam | 387.2 MB | ||
EGAF00000137656 | bam | 384.2 MB | ||
EGAF00000137657 | bam | 342.4 MB | ||
EGAF00000140874 | bam | 179.7 MB | ||
EGAF00000140875 | bam | 170.5 MB | ||
EGAF00000140876 | bam | 126.1 MB | ||
EGAF00000140877 | bam | 105.1 MB | ||
EGAF00000140878 | bam | 347.5 MB | ||
EGAF00000140879 | bam | 172.2 MB | ||
EGAF00000140880 | bam | 179.0 MB | ||
EGAF00000140881 | bam | 203.3 MB | ||
EGAF00000140882 | bam | 181.0 MB | ||
EGAF00000140883 | bam | 149.5 MB | ||
EGAF00000140884 | bam | 352.3 MB | ||
EGAF00000140885 | bam | 183.1 MB | ||
EGAF00000140886 | bam | 239.7 MB | ||
EGAF00000140887 | bam | 208.5 MB | ||
EGAF00000140888 | bam | 294.1 MB | ||
EGAF00000140889 | bam | 187.6 MB | ||
EGAF00000140890 | bam | 192.2 MB | ||
EGAF00000140891 | bam | 249.2 MB | ||
EGAF00000140892 | bam | 148.5 MB | ||
EGAF00000140893 | bam | 282.6 MB | ||
EGAF00000140894 | bam | 252.5 MB | ||
EGAF00000140895 | bam | 274.1 MB | ||
EGAF00000140896 | bam | 159.8 MB | ||
EGAF00000140897 | bam | 194.1 MB | ||
EGAF00000140898 | bam | 250.6 MB | ||
EGAF00000140899 | bam | 120.5 MB | ||
EGAF00000140900 | bam | 225.1 MB | ||
EGAF00000140901 | bam | 245.7 MB | ||
EGAF00000140902 | bam | 175.8 MB | ||
EGAF00000140903 | bam | 295.7 MB | ||
EGAF00000140904 | bam | 273.3 MB | ||
EGAF00000140905 | bam | 132.2 MB | ||
EGAF00000140906 | bam | 330.4 MB | ||
EGAF00000140907 | bam | 178.2 MB | ||
EGAF00000140908 | bam | 283.7 MB | ||
EGAF00000140909 | bam | 152.4 MB | ||
EGAF00000140910 | bam | 176.2 MB | ||
EGAF00000140911 | bam | 189.0 MB | ||
EGAF00000140912 | bam | 181.4 MB | ||
EGAF00000140913 | bam | 240.3 MB | ||
EGAF00000140914 | bam | 288.4 MB | ||
EGAF00000140915 | bam | 353.0 MB | ||
EGAF00000140916 | bam | 314.1 MB | ||
EGAF00000140917 | bam | 569.3 MB | ||
EGAF00000140918 | bam | 445.9 MB | ||
EGAF00000140919 | bam | 341.0 MB | ||
EGAF00000140920 | bam | 355.1 MB | ||
EGAF00000140921 | bam | 217.1 MB | ||
EGAF00000140922 | bam | 130.8 MB | ||
EGAF00000140923 | bam | 336.5 MB | ||
EGAF00000140924 | bam | 213.5 MB | ||
EGAF00000140925 | bam | 207.4 MB | ||
EGAF00000140926 | bam | 277.1 MB | ||
EGAF00000140927 | bam | 331.9 MB | ||
EGAF00000140928 | bam | 207.5 MB | ||
EGAF00000140929 | bam | 202.6 MB | ||
112 Files (29.7 GB) |