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Italian DAC

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Dr Claudio Lo Giudice
clalogiudice@gmail.com

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This DAC controls 7 datasets

Dataset ID	Description	Technology	Samples
EGAD50000000444	test giorgia 1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx	Illumina HiSeq 4000	1
EGAD50000000446	Standard variant calling was performed with GATK on nuclear-encoded mitochondrial genes retrieved from the MitoCarta3.0 human inventory (https://www.broadinstitute.org/mitocarta/mitocarta also variants within 10 kbp upstream and downstream of nuclear-encoded mitochondrial genes were included in our analyses . checksum was performed on three files: fastq files bam vcf	Illumina HiSeq 2000	1
EGAD50000000460	Standard variant calling was performed with GATK on nuclear-encoded mitochondrial genes retrieved from the MitoCarta3.0 human inventory (https://www.broadinstitute.org/mitocarta/mitocarta also variants within 10 kbp upstream and downstream of nuclear-encoded mitochondrial genes were included in our analyses . checksum was performed on three files: fastq files bam vcf	Illumina HiSeq 2000	1
EGAD50000000461	Standard variant calling was performed with GATK on nuclear-encoded mitochondrial genes retrieved from the MitoCarta3.0 human inventory (https://www.broadinstitute.org/mitocarta/mitocarta also variants within 10 kbp upstream and downstream of nuclear-encoded mitochondrial genes were included in our analyses . checksum was performed on three files: fastq files bam vcf	Illumina HiSeq 2000	1
EGAD50000000462	Standard variant calling was performed with GATK on nuclear-encoded mitochondrial genes retrieved from the MitoCarta3.0 human inventory (https://www.broadinstitute.org/mitocarta/mitocarta also variants within 10 kbp upstream and downstream of nuclear-encoded mitochondrial genes were included in our analyses . checksum was performed on three files: fastq files bam vcf	Illumina HiSeq 2000	1
EGAD50000000463	Standard variant calling was performed with GATK on nuclear-encoded mitochondrial genes retrieved from the MitoCarta3.0 human inventory (https://www.broadinstitute.org/mitocarta/mitocarta also variants within 10 kbp upstream and downstream of nuclear-encoded mitochondrial genes were included in our analyses . checksum was performed on three files: fastq files bam vcf	Illumina HiSeq 2000	1
EGAD50000000464	ALS_BA_Standard variant calling was performed with GATK on nuclear-encoded mitochondrial genes retrieved from the MitoCarta3.0 human inventory (https://www.broadinstitute.org/mitocarta/mitocarta also variants within 10 kbp upstream and downstream of nuclear-encoded mitochondrial genes were included in our analyses . checksum was performed on three files: fastq files bam vcf	Illumina HiSeq 2000	1