Wits Data Access Committee

Caroline Tiemessen
carolinet@nicd.ac.za

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Dataset ID	Description	Technology	Samples
EGAD00001007589	Contains 30x coverage whole genome sequence data from 40 HIV+ South Africans. Samples sequenced using Illumina HiSeq. BAM files have been uploaded. Sequenced at Edinburgh Genomics.	HiSeq X Ten	40
EGAD00010002575	This dataset contains the cleaned genotype data from 2173 African eosphageal squamous cell cancer cases and population controls. The genotype data was generated using the H3Africa Illumina Custom microarray.	Illumina HiScan	2173
EGAD00010002691	GWAS data. GRCh37	Illumina H3Africa Custom Array	2018